RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 HMGN4O00479 90 aa15.02■□□□□ -0
HMGN1-209ENST00000463631 IGLV1-44P01699 117 aa15.02■□□□□ -0
HMGN1-209ENST00000463631 RPS4Y1P22090 263 aaKnown RBP15.02■□□□□ -0
HMGN1-209ENST00000463631 NAAAQ02083 359 aa15.02■□□□□ -0
HMGN1-209ENST00000463631 DPY19L1Q2PZI1 675 aa15.02■□□□□ -0
HMGN1-209ENST00000463631 GPAT3Q53EU6 434 aa15.02■□□□□ -0
HMGN1-209ENST00000463631 ANXA8L1Q5VT79 327 aa15.02■□□□□ -0
HMGN1-209ENST00000463631 SPATA19Q7Z5L4 167 aa15.02■□□□□ -0
HMGN1-209ENST00000463631 HMGN2P46Q86SG4 172 aa15.02■□□□□ -0
HMGN1-209ENST00000463631 ANKRD46Q86W74 232 aa15.02■□□□□ -0
HMGN1-209ENST00000463631 TMEM99Q8N816 258 aa15.02■□□□□ -0
HMGN1-209ENST00000463631 VPS37AQ8NEZ2 397 aa15.02■□□□□ -0
HMGN1-209ENST00000463631 NUP37Q8NFH4 326 aa15.02■□□□□ -0
HMGN1-209ENST00000463631 OR4F15Q8NGB8 312 aa15.02■□□□□ -0
HMGN1-209ENST00000463631 MAGEE2Q8TD90 523 aaPredicted RBP15.02■□□□□ -0
HMGN1-209ENST00000463631 ADAM19Q9H013 955 aa15.02■□□□□ -0
HMGN1-209ENST00000463631 RAB1BQ9H0U4 201 aa15.02■□□□□ -0
HMGN1-209ENST00000463631 SLC38A1Q9H2H9 487 aa15.02■□□□□ -0
HMGN1-209ENST00000463631 ZNF442Q9H7R0 627 aa15.02■□□□□ -0
HMGN1-209ENST00000463631 CFAP73A6NFT4 308 aa15.01□□□□□ -0.01
HMGN1-209ENST00000463631 AKR7A3O95154 331 aa15.01□□□□□ -0.01
HMGN1-209ENST00000463631 VAMP5O95183 116 aa15.01□□□□□ -0.01
HMGN1-209ENST00000463631 STAMBPO95630 424 aa15.01□□□□□ -0.01
HMGN1-209ENST00000463631 CECR9P0C854 216 aa15.01□□□□□ -0.01
HMGN1-209ENST00000463631 CDH2P19022 906 aaPredicted RBP15.01□□□□□ -0.01
HMGN1-209ENST00000463631 P2RY4P51582 365 aa15.01□□□□□ -0.01
HMGN1-209ENST00000463631 CHN2P52757 468 aa15.01□□□□□ -0.01
HMGN1-209ENST00000463631 SH3BGRP55822 239 aaPredicted RBP15.01□□□□□ -0.01
HMGN1-209ENST00000463631 TXNL4AP83876 142 aaKnown RBP15.01□□□□□ -0.01
HMGN1-209ENST00000463631 EPS8Q12929 822 aa15.01□□□□□ -0.01
HMGN1-209ENST00000463631 CASP8Q14790 479 aa15.01□□□□□ -0.01
HMGN1-209ENST00000463631 GSTA3Q16772 222 aa15.01□□□□□ -0.01
HMGN1-209ENST00000463631 RIBC1Q8N443 379 aaPredicted RBP15.01□□□□□ -0.01
HMGN1-209ENST00000463631 TCP10LQ8TDR4 215 aa15.01□□□□□ -0.01
HMGN1-209ENST00000463631 BCL2L2Q92843 193 aaPredicted RBP15.01□□□□□ -0.01
HMGN1-209ENST00000463631 AURKBQ96GD4 344 aaPredicted RBP15.01□□□□□ -0.01
HMGN1-209ENST00000463631 C1orf159Q96HA4 380 aa15.01□□□□□ -0.01
HMGN1-209ENST00000463631 ALKBH3Q96Q83 286 aaPredicted RBP15.01□□□□□ -0.01
HMGN1-209ENST00000463631 MARCOQ9UEW3 520 aaPredicted RBP15.01□□□□□ -0.01
HMGN1-209ENST00000463631 LRP5LA4QPB2 252 aa15□□□□□ -0.01
HMGN1-209ENST00000463631 LILRA1O75019 489 aa15□□□□□ -0.01
HMGN1-209ENST00000463631 LGI1O95970 557 aa15□□□□□ -0.01
HMGN1-209ENST00000463631 IGKV3-15P01624 115 aa15□□□□□ -0.01
HMGN1-209ENST00000463631 ITGA2P17301 1181 aa15□□□□□ -0.01
HMGN1-209ENST00000463631 UBE2NP61088 152 aaKnown RBP15□□□□□ -0.01
HMGN1-209ENST00000463631 CEACAM7Q14002 265 aa15□□□□□ -0.01
HMGN1-209ENST00000463631 GNA13Q14344 377 aa15□□□□□ -0.01
HMGN1-209ENST00000463631 ANKRD16Q6P6B7 361 aa15□□□□□ -0.01
HMGN1-209ENST00000463631 LRRC74BQ6ZQY2 392 aa15□□□□□ -0.01
HMGN1-209ENST00000463631 ZNF440Q8IYI8 595 aa15□□□□□ -0.01
HMGN1-209ENST00000463631 WDR60Q8WVS4 1066 aa15□□□□□ -0.01
HMGN1-209ENST00000463631 NEU4Q8WWR8 484 aaPredicted RBP15□□□□□ -0.01
HMGN1-209ENST00000463631 SLC35A5Q9BS91 424 aa15□□□□□ -0.01
HMGN1-209ENST00000463631 DPY30Q9C005 99 aa15□□□□□ -0.01
HMGN1-209ENST00000463631 NELFAQ9H3P2 528 aa15□□□□□ -0.01
HMGN1-209ENST00000463631 LGALS13Q9UHV8 139 aa15□□□□□ -0.01
HMGN1-209ENST00000463631 TMEFF2Q9UIK5 374 aaPredicted RBP15□□□□□ -0.01
HMGN1-209ENST00000463631 KRT33AO76009 404 aa14.99□□□□□ -0.01
HMGN1-209ENST00000463631 SNUPNO95149 360 aaKnown RBP14.99□□□□□ -0.01
HMGN1-209ENST00000463631 BPGMP07738 259 aa14.99□□□□□ -0.01
HMGN1-209ENST00000463631 ERCC1P07992 297 aaPredicted RBP14.99□□□□□ -0.01
HMGN1-209ENST00000463631 CHRM4P08173 479 aa14.99□□□□□ -0.01
HMGN1-209ENST00000463631 HOXB1P14653 301 aaPredicted RBP14.99□□□□□ -0.01
HMGN1-209ENST00000463631 DAOP14920 347 aa14.99□□□□□ -0.01
HMGN1-209ENST00000463631 IL2RGP31785 369 aa14.99□□□□□ -0.01
HMGN1-209ENST00000463631 CHI3L1P36222 383 aaPredicted RBP14.99□□□□□ -0.01
HMGN1-209ENST00000463631 CDH15P55291 814 aa14.99□□□□□ -0.01
HMGN1-209ENST00000463631 OR7A5Q15622 319 aa14.99□□□□□ -0.01
HMGN1-209ENST00000463631 SYPL1Q16563 259 aa14.99□□□□□ -0.01
HMGN1-209ENST00000463631 MRPL2Q5T653 305 aaKnown RBP14.99□□□□□ -0.01
HMGN1-209ENST00000463631 UGT2A3Q6UWM9 527 aa14.99□□□□□ -0.01
HMGN1-209ENST00000463631 CREB3L2Q70SY1 520 aa14.99□□□□□ -0.01
HMGN1-209ENST00000463631 LINGO2Q7L985 606 aa14.99□□□□□ -0.01
HMGN1-209ENST00000463631 GPAT4Q86UL3 456 aa14.99□□□□□ -0.01
HMGN1-209ENST00000463631 LSRQ86X29 649 aaPredicted RBP14.99□□□□□ -0.01
HMGN1-209ENST00000463631 RNF130Q86XS8 419 aa14.99□□□□□ -0.01
HMGN1-209ENST00000463631 ZNF786Q8N393 782 aa14.99□□□□□ -0.01
HMGN1-209ENST00000463631 ANKFN1Q8N957 763 aa14.99□□□□□ -0.01
HMGN1-209ENST00000463631 LINC01356Q8N9X3 169 aa14.99□□□□□ -0.01
HMGN1-209ENST00000463631 ANKK1Q8NFD2 765 aa14.99□□□□□ -0.01
HMGN1-209ENST00000463631 KIF18AQ8NI77 898 aa14.99□□□□□ -0.01
HMGN1-209ENST00000463631 CCDC115Q96NT0 180 aa14.99□□□□□ -0.01
HMGN1-209ENST00000463631 LINC00470Q9BZP3 86 aa14.99□□□□□ -0.01
HMGN1-209ENST00000463631 AKTIPQ9H8T0 292 aa14.99□□□□□ -0.01
HMGN1-209ENST00000463631 MTHFD2LQ9H903 347 aaPredicted RBP14.99□□□□□ -0.01
HMGN1-209ENST00000463631 PCDHB14Q9Y5E9 798 aa14.99□□□□□ -0.01
HMGN1-209ENST00000463631 FRS3O43559 492 aa14.98□□□□□ -0.01
HMGN1-209ENST00000463631 CPSF4O95639 269 aaKnown RBP14.98□□□□□ -0.01
HMGN1-209ENST00000463631 DBIP07108 87 aaKnown RBP14.98□□□□□ -0.01
HMGN1-209ENST00000463631 IL7RP16871 459 aa14.98□□□□□ -0.01
HMGN1-209ENST00000463631 PCMT1P22061 227 aa14.98□□□□□ -0.01
HMGN1-209ENST00000463631 CXCR1P25024 350 aa14.98□□□□□ -0.01
HMGN1-209ENST00000463631 APEX1P27695 318 aaKnown RBP14.98□□□□□ -0.01
HMGN1-209ENST00000463631 CALCRP30988 508 aa14.98□□□□□ -0.01
HMGN1-209ENST00000463631 SRP14P37108 136 aaKnown RBP14.98□□□□□ -0.01
HMGN1-209ENST00000463631 SELENOPP49908 381 aa14.98□□□□□ -0.01
HMGN1-209ENST00000463631 ANXA11P50995 505 aaKnown RBP14.98□□□□□ -0.01
HMGN1-209ENST00000463631 CLNS1AP54105 237 aaKnown RBP14.98□□□□□ -0.01
HMGN1-209ENST00000463631 POU3F1Q03052 451 aaPredicted RBP14.98□□□□□ -0.01
HMGN1-209ENST00000463631 HGFACQ04756 655 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms