RNA–Protein interactions for RNA: snR53

snR53, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR53, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR53snR53 ADD37Q03233 198 aa0.43□□□□□ -2.34
snR53snR53 RTT103Q05543 409 aa0.43□□□□□ -2.34
snR53snR53 NRT1Q08485 598 aa0.43□□□□□ -2.34
snR53snR53 ULA1Q12059 462 aa0.43□□□□□ -2.34
snR53snR53 PRS5Q12265 496 aaKnown RBP0.43□□□□□ -2.34
snR53snR53 AI5_ALPHAQ9ZZX1 630 aa0.43□□□□□ -2.34
snR53snR53 SAN1P22470 610 aa0.42□□□□□ -2.34
snR53snR53 GCD6P32501 712 aaKnown RBP0.42□□□□□ -2.34
snR53snR53 PMC1P38929 1173 aaPredicted RBP0.42□□□□□ -2.34
snR53snR53 NRG1Q03125 231 aa0.42□□□□□ -2.34
snR53snR53 IRC3Q06683 689 aa0.42□□□□□ -2.34
snR53snR53 MRL1Q06815 381 aa0.42□□□□□ -2.34
snR53snR53 SRL1Q08673 210 aa0.42□□□□□ -2.34
snR53snR53 OXR1Q08952 273 aa0.42□□□□□ -2.34
snR53snR53 YKL033W-AQ86ZR7 236 aa0.42□□□□□ -2.34
snR53snR53 SFB3P38810 929 aa0.41□□□□□ -2.34
snR53snR53 SIM1P40472 476 aa0.41□□□□□ -2.34
snR53snR53 SKP2P42843 763 aa0.41□□□□□ -2.34
snR53snR53 ATP23P53722 227 aa0.41□□□□□ -2.34
snR53snR53 FCP1Q03254 732 aa0.41□□□□□ -2.34
snR53snR53 SNA4Q07549 140 aa0.41□□□□□ -2.34
snR53snR53 HER1Q12276 1246 aa0.41□□□□□ -2.34
snR53snR53 CSR2Q12734 1121 aa0.41□□□□□ -2.34
snR53snR53 SIR3P06701 978 aa0.4□□□□□ -2.35
snR53snR53 SSA4P22202 642 aaKnown RBP0.4□□□□□ -2.35
snR53snR53 KCC4P25389 1037 aa0.4□□□□□ -2.35
snR53snR53 STE13P33894 931 aa0.4□□□□□ -2.35
snR53snR53 GMH1P36125 273 aa0.4□□□□□ -2.35
snR53snR53 GRS1P38088 690 aaKnown RBP0.4□□□□□ -2.35
snR53snR53 YHR078WP38799 552 aa0.4□□□□□ -2.35
snR53snR53 PAN2P53010 1115 aaPredicted RBP0.4□□□□□ -2.35
snR53snR53 VPS30Q02948 557 aa0.4□□□□□ -2.35
snR53snR53 NUT2Q06213 157 aa0.4□□□□□ -2.35
snR53snR53 PRE9P23638 258 aaKnown RBP0.39□□□□□ -2.35
snR53snR53 TSR4P25040 408 aa0.39□□□□□ -2.35
snR53snR53 FUB1P25659 250 aa0.39□□□□□ -2.35
snR53snR53 TIF3P34167 436 aaKnown RBP0.39□□□□□ -2.35
snR53snR53 TSL1P38427 1098 aaKnown RBP0.39□□□□□ -2.35
snR53snR53 GNP1P48813 663 aa0.39□□□□□ -2.35
snR53snR53 TGL5Q12043 749 aa0.39□□□□□ -2.35
snR53snR53 YPR089WO13585 888 aa0.38□□□□□ -2.35
snR53snR53 TRL1P09880 827 aaKnown RBP0.38□□□□□ -2.35
snR53snR53 REV1P12689 985 aa0.38□□□□□ -2.35
snR53snR53 NGG1P32494 702 aa0.38□□□□□ -2.35
snR53snR53 RER2P35196 286 aa0.38□□□□□ -2.35
snR53snR53 FMP46P36141 133 aaKnown RBP0.38□□□□□ -2.35
snR53snR53 YMC2P38087 329 aa0.38□□□□□ -2.35
snR53snR53 DHH1P39517 506 aaKnown RBP0.38□□□□□ -2.35
snR53snR53 OAF1P39720 1047 aaPredicted RBP0.38□□□□□ -2.35
snR53snR53 NMD5P46970 1048 aa0.38□□□□□ -2.35
snR53snR53 ASN1P49089 572 aaKnown RBP0.38□□□□□ -2.35
snR53snR53 PIP2P52960 996 aa0.38□□□□□ -2.35
snR53snR53 SPC98P53540 846 aa0.38□□□□□ -2.35
snR53snR53 ASI2P53895 289 aa0.38□□□□□ -2.35
snR53snR53 HXK1P04806 485 aaKnown RBP0.37□□□□□ -2.35
snR53snR53 PHO4P07270 312 aaKnown RBP0.37□□□□□ -2.35
snR53snR53 PRP16P15938 1071 aaPredicted RBP0.37□□□□□ -2.35
snR53snR53 MGM1P32266 881 aa0.37□□□□□ -2.35
snR53snR53 GRS2Q06817 618 aa0.37□□□□□ -2.35
snR53snR53 YMR230W-AQ3E7B5 62 aa0.37□□□□□ -2.35
snR53snR53 PHO5P00635 467 aa0.36□□□□□ -2.35
snR53snR53 TUP1P16649 713 aa0.36□□□□□ -2.35
snR53snR53 PHO11P35842 467 aa0.36□□□□□ -2.35
snR53snR53 PHO12P38693 467 aa0.36□□□□□ -2.35
snR53snR53 SNO3P43544 222 aa0.36□□□□□ -2.35
snR53snR53 RSC9Q03124 581 aa0.36□□□□□ -2.35
snR53snR53 ENT2Q05785 613 aa0.36□□□□□ -2.35
snR53snR53 RSA1Q08932 381 aa0.36□□□□□ -2.35
snR53snR53 USV1Q12132 391 aa0.36□□□□□ -2.35
snR53snR53 MVD1P32377 396 aaKnown RBP0.35□□□□□ -2.35
snR53snR53 ATO2P32907 282 aa0.35□□□□□ -2.35
snR53snR53 RTT107P38850 1070 aa0.35□□□□□ -2.35
snR53snR53 CCT3P39077 534 aaKnown RBP0.35□□□□□ -2.35
snR53snR53 BAP3P41815 604 aa0.35□□□□□ -2.35
snR53snR53 MDJ2P42834 146 aa0.35□□□□□ -2.35
snR53snR53 FHN1P53279 174 aa0.35□□□□□ -2.35
snR53snR53 ATG11Q12527 1178 aa0.35□□□□□ -2.35
snR53snR53 YLR415CO13578 112 aa0.34□□□□□ -2.36
snR53snR53 GCR1P07261 785 aa0.34□□□□□ -2.36
snR53snR53 RRT2P38332 387 aa0.34□□□□□ -2.36
snR53snR53 PZF1P39933 429 aa0.34□□□□□ -2.36
snR53snR53 MIT1P40002 666 aa0.34□□□□□ -2.36
snR53snR53 CEP3P40969 608 aa0.34□□□□□ -2.36
snR53snR53 GYP7P48365 746 aa0.34□□□□□ -2.36
snR53snR53 MUS81Q04149 632 aaPredicted RBP0.34□□□□□ -2.36
snR53snR53 MRPL1Q04599 285 aa0.34□□□□□ -2.36
snR53snR53 YPL066WQ12194 479 aa0.34□□□□□ -2.36
snR53snR53 YAP1P19880 650 aaKnown RBP0.33□□□□□ -2.36
snR53snR53 MRPL9P31334 269 aa0.33□□□□□ -2.36
snR53snR53 TYE7P33122 291 aaPredicted RBP0.33□□□□□ -2.36
snR53snR53 MOT2P34909 587 aaKnown RBP0.33□□□□□ -2.36
snR53snR53 MRPL4P36517 319 aa0.33□□□□□ -2.36
snR53snR53 MRPS18P42847 217 aa0.33□□□□□ -2.36
snR53snR53 YMR317WQ04893 1140 aa0.33□□□□□ -2.36
snR53snR53 MCD1Q12158 566 aa0.33□□□□□ -2.36
snR53snR53 CDC48P25694 835 aaKnown RBP0.32□□□□□ -2.36
snR53snR53 SET3P36124 751 aa0.32□□□□□ -2.36
snR53snR53 SHE10P53075 577 aa0.32□□□□□ -2.36
snR53snR53 DUS1P53759 423 aaKnown RBP0.32□□□□□ -2.36
snR53snR53 YKR011CQ02209 353 aa0.32□□□□□ -2.36
Retrieved 100 of 5,963 RNA–protein pairs in 67.6 ms