RNA–Protein interactions for RNA: YPL208W

RKM1, Transcript of SET-domain lysine-N-methyltransferase, yeast

Gene RKM1, Length 1,752 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RKM1	YPL208W	OSH2	Q12451	1283 aa		3.02	□□□□□ -1.93
RKM1	YPL208W	TOP3	P13099	656 aa		3.02	□□□□□ -1.93
RKM1	YPL208W	YCL002C	P25565	263 aa		3.02	□□□□□ -1.93
RKM1	YPL208W	SAP190	P36123	1033 aa		3.02	□□□□□ -1.93
RKM1	YPL208W	YBR053C	P38235	358 aa		3.02	□□□□□ -1.93
RKM1	YPL208W	PCL5	P38794	229 aa		3.02	□□□□□ -1.93
RKM1	YPL208W	YJL163C	P46996	555 aa		3.02	□□□□□ -1.93
RKM1	YPL208W	TAD1	P53065	400 aa		3.02	□□□□□ -1.93
RKM1	YPL208W	NRG1	Q03125	231 aa		3.02	□□□□□ -1.93
RKM1	YPL208W	RAD4	P14736	754 aa		3.01	□□□□□ -1.93
RKM1	YPL208W	HSP60	P19882	572 aa	Known RBP	3.01	□□□□□ -1.93
RKM1	YPL208W	PEX2	P32800	271 aa		3.01	□□□□□ -1.93
RKM1	YPL208W	RSC3	Q06639	885 aa		3.01	□□□□□ -1.93
RKM1	YPL208W	YLR415C	O13578	112 aa		3	□□□□□ -1.93
RKM1	YPL208W	UBP6	P43593	499 aa	Known RBP	3	□□□□□ -1.93
RKM1	YPL208W	LRS4	Q04087	347 aa	Known RBP	3	□□□□□ -1.93
RKM1	YPL208W	IRC13	Q08630	104 aa		3	□□□□□ -1.93
RKM1	YPL208W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	3	□□□□□ -1.93	not detected
RKM1	YPL208W	CDC43	P18898	376 aa		3	□□□□□ -1.93
RKM1	YPL208W	HIS7	P33734	552 aa	Known RBP	3	□□□□□ -1.93
RKM1	YPL208W	EMC3	P36039	253 aa		3	□□□□□ -1.93
RKM1	YPL208W	PAM1	P37304	830 aa	Known RBP	3	□□□□□ -1.93
RKM1	YPL208W	TDP1	P38319	544 aa		3	□□□□□ -1.93
RKM1	YPL208W	YIR042C	P40586	236 aa		3	□□□□□ -1.93
RKM1	YPL208W	PFA3	P42836	336 aa		3	□□□□□ -1.93
RKM1	YPL208W	YGR125W	P53273	1036 aa		3	□□□□□ -1.93
RKM1	YPL208W	YDL124W	Q07551	312 aa	Known RBP	3	□□□□□ -1.93
RKM1	YPL208W	CIT1	P00890	479 aa		2.99	□□□□□ -1.93
RKM1	YPL208W	TOM70	P07213	617 aa	Known RBP	2.99	□□□□□ -1.93
RKM1	YPL208W	GFA1	P14742	717 aa	Known RBP	2.99	□□□□□ -1.93
RKM1	YPL208W	PPZ2	P33329	710 aa		2.99	□□□□□ -1.93
RKM1	YPL208W	GGA2	P38817	585 aa	Known RBP	2.99	□□□□□ -1.93
RKM1	YPL208W	HUL4	P40985	892 aa		2.99	□□□□□ -1.93
RKM1	YPL208W	GYP8	P43570	497 aa		2.99	□□□□□ -1.93
RKM1	YPL208W	TIM54	P47045	478 aa		2.99	□□□□□ -1.93
RKM1	YPL208W	DAM1	P53267	343 aa		2.99	□□□□□ -1.93
RKM1	YPL208W	RIA1	P53893	1110 aa		2.99	□□□□□ -1.93
RKM1	YPL208W	SUT2	Q12286	268 aa		2.99	□□□□□ -1.93
RKM1	YPL208W	KIN3	P22209	435 aa		2.98	□□□□□ -1.93
RKM1	YPL208W	CBR1	P38626	284 aa	Known RBP	2.98	□□□□□ -1.93
RKM1	YPL208W	HSV2	P50079	448 aa	Predicted RBP	2.98	□□□□□ -1.93
RKM1	YPL208W	YGR283C	P53336	341 aa	Predicted RBP	2.98	□□□□□ -1.93
RKM1	YPL208W	LAT1	P12695	482 aa	Known RBP	2.97	□□□□□ -1.93
RKM1	YPL208W	HCA4	P20448	770 aa	Known RBP	2.97	□□□□□ -1.93
RKM1	YPL208W	SHR5	P41912	237 aa		2.97	□□□□□ -1.93
RKM1	YPL208W	MTR3	P48240	250 aa	Predicted RBP	2.97	□□□□□ -1.93
RKM1	YPL208W	VPS73	P53142	486 aa	Known RBP	2.97	□□□□□ -1.93
RKM1	YPL208W	YDR514C	Q04408	483 aa		2.97	□□□□□ -1.93
RKM1	YPL208W	TGL5	Q12043	749 aa		2.97	□□□□□ -1.93
RKM1	YPL208W	NDJ1	Q12366	352 aa		2.97	□□□□□ -1.93
RKM1	YPL208W	SET5	P38890	526 aa	Known RBP	2.97	□□□□□ -1.93
RKM1	YPL208W	TAH11	P47112	604 aa		2.97	□□□□□ -1.93
RKM1	YPL208W	TAF8	Q03750	510 aa		2.97	□□□□□ -1.93
RKM1	YPL208W	ASM4	Q05166	528 aa		2.97	□□□□□ -1.93
RKM1	YPL208W	REH1	Q06709	432 aa		2.97	□□□□□ -1.93
RKM1	YPL208W	SGO1	Q08490	590 aa		2.97	□□□□□ -1.93
RKM1	YPL208W	THI21	Q08975	551 aa		2.97	□□□□□ -1.93
RKM1	YPL208W	BNR1	P40450	1375 aa		2.96	□□□□□ -1.93
RKM1	YPL208W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	2.96	□□□□□ -1.94	not detected
RKM1	YPL208W	MET6	P05694	767 aa	Known RBP	2.96	□□□□□ -1.94
RKM1	YPL208W	BCD1	P38772	366 aa		2.96	□□□□□ -1.94
RKM1	YPL208W	FMP52	P40008	231 aa		2.96	□□□□□ -1.94
RKM1	YPL208W	ALG2	P43636	503 aa		2.96	□□□□□ -1.94
RKM1	YPL208W	SSL2	Q00578	843 aa		2.96	□□□□□ -1.94
RKM1	YPL208W	RIX1	P38883	763 aa	Predicted RBP	2.95	□□□□□ -1.94
RKM1	YPL208W	HOS4	P40480	1083 aa		2.95	□□□□□ -1.94
RKM1	YPL208W	MET7	Q08645	548 aa		2.95	□□□□□ -1.94
RKM1	YPL208W	FLC1	Q08967	793 aa		2.95	□□□□□ -1.94
RKM1	YPL208W	YBR182C-A	Q8TGU6	64 aa		2.95	□□□□□ -1.94
RKM1	YPL208W	DIF1	O13577	133 aa		2.95	□□□□□ -1.94
RKM1	YPL208W	TUB1	P09733	447 aa	Known RBP	2.95	□□□□□ -1.94
RKM1	YPL208W	BET3	P36149	193 aa		2.95	□□□□□ -1.94
RKM1	YPL208W	YBR259W	P38338	688 aa		2.95	□□□□□ -1.94
RKM1	YPL208W	SIC1	P38634	284 aa		2.95	□□□□□ -1.94
RKM1	YPL208W	RLP7	P40693	322 aa	Known RBP	2.95	□□□□□ -1.94
RKM1	YPL208W	ZDS1	P50111	915 aa	Known RBP	2.95	□□□□□ -1.94
RKM1	YPL208W	UBC11	P52492	156 aa		2.95	□□□□□ -1.94
RKM1	YPL208W	TEL2	P53038	688 aa		2.95	□□□□□ -1.94
RKM1	YPL208W	GPR1	Q12361	961 aa		2.95	□□□□□ -1.94
RKM1	YPL208W	PER1	P25625	357 aa		2.94	□□□□□ -1.94
RKM1	YPL208W	YHR020W	P38708	688 aa	Known RBP	2.94	□□□□□ -1.94
RKM1	YPL208W	YIL166C	P40445	542 aa		2.94	□□□□□ -1.94
RKM1	YPL208W	SNM1	P40993	198 aa		2.94	□□□□□ -1.94
RKM1	YPL208W	ZIP2	P53061	704 aa		2.94	□□□□□ -1.94
RKM1	YPL208W	GAD1	Q04792	585 aa		2.94	□□□□□ -1.94
RKM1	YPL208W	ATG11	Q12527	1178 aa		2.94	□□□□□ -1.94
RKM1	YPL208W	DMC1	P25453	334 aa		2.93	□□□□□ -1.94
RKM1	YPL208W	REV7	P38927	245 aa		2.93	□□□□□ -1.94
RKM1	YPL208W	HUL5	P53119	910 aa		2.93	□□□□□ -1.94
RKM1	YPL208W	YBP2	P53169	641 aa		2.93	□□□□□ -1.94
RKM1	YPL208W	IMO32	P53219	342 aa		2.93	□□□□□ -1.94
RKM1	YPL208W	TEX1	P53851	422 aa	Known RBP	2.93	□□□□□ -1.94
RKM1	YPL208W	ATP25	Q03153	612 aa		2.93	□□□□□ -1.94
RKM1	YPL208W	HIR1	P32479	840 aa		2.92	□□□□□ -1.94
RKM1	YPL208W	YJL206C	P39529	758 aa		2.92	□□□□□ -1.94
RKM1	YPL208W	RSP5	P39940	809 aa	Known RBP	2.92	□□□□□ -1.94
RKM1	YPL208W	ALY2	P47029	1046 aa		2.92	□□□□□ -1.94
RKM1	YPL208W	SMX3	P54999	86 aa	Predicted RBP	2.92	□□□□□ -1.94
RKM1	YPL208W	CAN1	P04817	590 aa		2.92	□□□□□ -1.94
RKM1	YPL208W	SPC29	P33419	253 aa		2.92	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 151.8 ms