RNA–Protein interactions for RNA: YPL147W

PXA1, Transcript of Subunit of a heterodimeric peroxisomal ABC transport complex, yeast

Gene PXA1, Length 2,613 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PXA1	YPL147W	RET1	P22276	1149 aa	Known RBP	5.21	□□□□□ -1.58
PXA1	YPL147W	WHI3	P34761	661 aa	Known RBP	5.21	□□□□□ -1.58
PXA1	YPL147W	TYS1	P36421	394 aa	Known RBP	5.21	□□□□□ -1.58
PXA1	YPL147W	BCD1	P38772	366 aa		5.21	□□□□□ -1.58
PXA1	YPL147W	MMM1	P41800	426 aa		5.21	□□□□□ -1.58
PXA1	YPL147W	SPO74	P45819	413 aa		5.21	□□□□□ -1.58
PXA1	YPL147W	YMR1	P47147	688 aa	Known RBP RIP-Chip data	5.21	□□□□□ -1.58	not detected
PXA1	YPL147W	TOM22	P49334	152 aa		5.21	□□□□□ -1.58
PXA1	YPL147W	BRE5	P53741	515 aa	Known RBP	5.21	□□□□□ -1.58
PXA1	YPL147W	NIS1	P53939	407 aa		5.21	□□□□□ -1.58
PXA1	YPL147W	TAF8	Q03750	510 aa		5.21	□□□□□ -1.58
PXA1	YPL147W	OPY2	Q06810	360 aa		5.21	□□□□□ -1.58
PXA1	YPL147W	DSE3	Q08729	430 aa		5.21	□□□□□ -1.58
PXA1	YPL147W	NOT5	Q12514	560 aa	Predicted RBP	5.21	□□□□□ -1.58
PXA1	YPL147W	CYT1	P07143	309 aa		5.2	□□□□□ -1.58
PXA1	YPL147W	RAD53	P22216	821 aa		5.2	□□□□□ -1.58
PXA1	YPL147W	PRD1	P25375	712 aa		5.2	□□□□□ -1.58
PXA1	YPL147W	IMP2'	P32351	346 aa		5.2	□□□□□ -1.58
PXA1	YPL147W	SMI1	P32566	505 aa		5.2	□□□□□ -1.58
PXA1	YPL147W	BUD2	P33314	1104 aa		5.2	□□□□□ -1.58
PXA1	YPL147W	YKL063C	P35725	167 aa		5.2	□□□□□ -1.58
PXA1	YPL147W	MSR1	P38714	643 aa		5.2	□□□□□ -1.58
PXA1	YPL147W	MKT1	P40850	830 aa	Known RBP	5.2	□□□□□ -1.58
PXA1	YPL147W	YGR054W	P53235	642 aa	Known RBP	5.2	□□□□□ -1.58
PXA1	YPL147W	NAN1	Q02931	896 aa	Known RBP	5.2	□□□□□ -1.58
PXA1	YPL147W	ARP9	Q05123	467 aa		5.2	□□□□□ -1.58
PXA1	YPL147W	PEX19	Q07418	342 aa		5.2	□□□□□ -1.58
PXA1	YPL147W	SCM3	Q12334	223 aa		5.2	□□□□□ -1.58
PXA1	YPL147W	TRL1	P09880	827 aa	Known RBP	5.2	□□□□□ -1.58
PXA1	YPL147W	HO	P09932	586 aa		5.2	□□□□□ -1.58
PXA1	YPL147W	RPC53	P25441	422 aa		5.2	□□□□□ -1.58
PXA1	YPL147W	BMH1	P29311	267 aa	Known RBP	5.2	□□□□□ -1.58
PXA1	YPL147W	PTP2	P29461	750 aa		5.2	□□□□□ -1.58
PXA1	YPL147W	MEI5	P32489	222 aa		5.2	□□□□□ -1.58
PXA1	YPL147W	SRB4	P32569	687 aa		5.2	□□□□□ -1.58
PXA1	YPL147W	STE13	P33894	931 aa		5.2	□□□□□ -1.58
PXA1	YPL147W	RMA1	P36001	430 aa	Known RBP	5.2	□□□□□ -1.58
PXA1	YPL147W	RDH54	P38086	958 aa		5.2	□□□□□ -1.58
PXA1	YPL147W	CCZ1	P38273	704 aa		5.2	□□□□□ -1.58
PXA1	YPL147W	DSS1	P39112	969 aa		5.2	□□□□□ -1.58
PXA1	YPL147W	SIT1	P39980	628 aa		5.2	□□□□□ -1.58
PXA1	YPL147W	KHA1	P40309	873 aa		5.2	□□□□□ -1.58
PXA1	YPL147W	YGR067C	P53243	804 aa		5.2	□□□□□ -1.58
PXA1	YPL147W	FMP30	Q02883	468 aa		5.2	□□□□□ -1.58
PXA1	YPL147W	VAC14	Q06708	880 aa		5.2	□□□□□ -1.58
PXA1	YPL147W	SSP2	Q08646	371 aa		5.2	□□□□□ -1.58
PXA1	YPL147W	RSF2	P46974	1380 aa		5.19	□□□□□ -1.58
PXA1	YPL147W	GUT1	P32190	709 aa		5.19	□□□□□ -1.58
PXA1	YPL147W	DOA4	P32571	926 aa		5.19	□□□□□ -1.58
PXA1	YPL147W	LHS1	P36016	881 aa		5.19	□□□□□ -1.58
PXA1	YPL147W	MDE1	P47095	244 aa		5.19	□□□□□ -1.58
PXA1	YPL147W	BPL1	P48445	690 aa	Predicted RBP	5.19	□□□□□ -1.58
PXA1	YPL147W	KAP114	P53067	1004 aa		5.19	□□□□□ -1.58
PXA1	YPL147W	DAK1	P54838	584 aa	Known RBP	5.19	□□□□□ -1.58
PXA1	YPL147W	RSC4	Q02206	625 aa		5.19	□□□□□ -1.58
PXA1	YPL147W	ULP1	Q02724	621 aa		5.19	□□□□□ -1.58
PXA1	YPL147W	EAR1	Q03212	550 aa		5.19	□□□□□ -1.58
PXA1	YPL147W	TRS130	Q03660	1102 aa		5.19	□□□□□ -1.58
PXA1	YPL147W	SPC2	Q04969	178 aa		5.19	□□□□□ -1.58
PXA1	YPL147W	VIK1	Q12045	647 aa		5.19	□□□□□ -1.58
PXA1	YPL147W	SFI1	Q12369	946 aa		5.19	□□□□□ -1.58
PXA1	YPL147W	YLR358C	O13565	187 aa		5.19	□□□□□ -1.58
PXA1	YPL147W	MIS1	P09440	975 aa	Known RBP	5.19	□□□□□ -1.58
PXA1	YPL147W	POL3	P15436	1097 aa		5.19	□□□□□ -1.58
PXA1	YPL147W	SPO16	P17122	198 aa		5.19	□□□□□ -1.58
PXA1	YPL147W	YEL043W	P32618	956 aa		5.19	□□□□□ -1.58
PXA1	YPL147W	CPR5	P35176	225 aa		5.19	□□□□□ -1.58
PXA1	YPL147W	YBR138C	P38277	524 aa		5.19	□□□□□ -1.58
PXA1	YPL147W	PEX32	P38292	413 aa		5.19	□□□□□ -1.58
PXA1	YPL147W	MDJ2	P42834	146 aa		5.19	□□□□□ -1.58
PXA1	YPL147W	GCN20	P43535	752 aa	Known RBP	5.19	□□□□□ -1.58
PXA1	YPL147W	YGL140C	P53120	1219 aa		5.19	□□□□□ -1.58
PXA1	YPL147W	LSG1	P53145	640 aa	Known RBP	5.19	□□□□□ -1.58
PXA1	YPL147W	GUP1	P53154	560 aa		5.19	□□□□□ -1.58
PXA1	YPL147W	IPI3	P53877	555 aa		5.19	□□□□□ -1.58
PXA1	YPL147W	CUE5	Q08412	411 aa	Known RBP	5.19	□□□□□ -1.58
PXA1	YPL147W	CMC2	Q3E7A4	109 aa		5.19	□□□□□ -1.58
PXA1	YPL147W	MRPL8	P22353	238 aa		5.18	□□□□□ -1.58
PXA1	YPL147W	YUH1	P35127	236 aa		5.18	□□□□□ -1.58
PXA1	YPL147W	SWH1	P35845	1188 aa		5.18	□□□□□ -1.58
PXA1	YPL147W	ALG14	P38242	237 aa		5.18	□□□□□ -1.58
PXA1	YPL147W	KEL1	P38853	1164 aa	Known RBP	5.18	□□□□□ -1.58
PXA1	YPL147W	APL6	P46682	809 aa		5.18	□□□□□ -1.58
PXA1	YPL147W	ATH1	P48016	1211 aa		5.18	□□□□□ -1.58
PXA1	YPL147W	FDC1	Q03034	503 aa		5.18	□□□□□ -1.58
PXA1	YPL147W	RMD1	Q03441	430 aa		5.18	□□□□□ -1.58
PXA1	YPL147W	DPB4	Q04603	196 aa	Known RBP	5.18	□□□□□ -1.58
PXA1	YPL147W	ATG20	Q07528	640 aa		5.18	□□□□□ -1.58
PXA1	YPL147W	YOR289W	Q12012	251 aa	Predicted RBP	5.18	□□□□□ -1.58
PXA1	YPL147W	FAP7	Q12055	197 aa	Predicted RBP	5.18	□□□□□ -1.58
PXA1	YPL147W	SRF1	Q12516	437 aa		5.18	□□□□□ -1.58
PXA1	YPL147W	YAP1	P19880	650 aa	Known RBP	5.18	□□□□□ -1.58
PXA1	YPL147W	VAN1	P23642	535 aa		5.18	□□□□□ -1.58
PXA1	YPL147W	TCD1	P38756	429 aa		5.18	□□□□□ -1.58
PXA1	YPL147W	MTG2	P38860	518 aa		5.18	□□□□□ -1.58
PXA1	YPL147W	SAP1	P39955	897 aa	Known RBP	5.18	□□□□□ -1.58
PXA1	YPL147W	RIO2	P40160	425 aa	Known RBP	5.18	□□□□□ -1.58
PXA1	YPL147W	URB2	P47108	1174 aa		5.18	□□□□□ -1.58
PXA1	YPL147W	YGR266W	P53326	701 aa		5.18	□□□□□ -1.58
PXA1	YPL147W	DIP5	P53388	608 aa		5.18	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms