RNA–Protein interactions for RNA: YPL112C

PEX25, Transcript of Peripheral peroxisomal membrane peroxin, yeast

Gene PEX25, Length 1,185 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX25	YPL112C	LAA1	P39526	2014 aa		11.55	□□□□□ -0.56
PEX25	YPL112C	ASP3-2	P0CX77	362 aa		11.54	□□□□□ -0.56
PEX25	YPL112C	ASP3-3	P0CX78	362 aa		11.54	□□□□□ -0.56
PEX25	YPL112C	ASP3-4	P0CX79	362 aa		11.54	□□□□□ -0.56
PEX25	YPL112C	ASP3-1	P0CZ17	362 aa		11.54	□□□□□ -0.56
PEX25	YPL112C	SSB1	P11484	613 aa	Known RBP	11.54	□□□□□ -0.56
PEX25	YPL112C	PSO2	P30620	661 aa		11.54	□□□□□ -0.56
PEX25	YPL112C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	11.54	□□□□□ -0.56	not detected
PEX25	YPL112C	YEL023C	P39992	682 aa		11.54	□□□□□ -0.56
PEX25	YPL112C	SSB2	P40150	613 aa	Known RBP	11.54	□□□□□ -0.56
PEX25	YPL112C	MMF1	P40185	145 aa	Known RBP	11.54	□□□□□ -0.56
PEX25	YPL112C	TIM8	P57744	87 aa		11.54	□□□□□ -0.56
PEX25	YPL112C	HAP5	Q02516	242 aa		11.54	□□□□□ -0.56
PEX25	YPL112C	SNU56	Q03782	492 aa	Known RBP	11.54	□□□□□ -0.56
PEX25	YPL112C	PIG1	Q06216	648 aa		11.54	□□□□□ -0.56
PEX25	YPL112C	MRI1	Q06489	411 aa	Known RBP	11.54	□□□□□ -0.56
PEX25	YPL112C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	11.54	□□□□□ -0.56	not detected
PEX25	YPL112C	DAP1	Q12091	152 aa		11.54	□□□□□ -0.56
PEX25	YPL112C	AIM44	Q99299	758 aa		11.54	□□□□□ -0.56
PEX25	YPL112C	TRS33	Q99394	268 aa		11.54	□□□□□ -0.56
PEX25	YPL112C	HAP2	P06774	265 aa		11.53	□□□□□ -0.56
PEX25	YPL112C	CYS3	P31373	394 aa	Known RBP	11.53	□□□□□ -0.56
PEX25	YPL112C	PEX2	P32800	271 aa		11.53	□□□□□ -0.56
PEX25	YPL112C	SLX5	P32828	619 aa	Known RBP	11.53	□□□□□ -0.56
PEX25	YPL112C	CCC2	P38995	1004 aa		11.53	□□□□□ -0.56
PEX25	YPL112C	MAK16	P10962	306 aa	Predicted RBP	11.52	□□□□□ -0.57
PEX25	YPL112C	YHR054C	P38780	354 aa		11.52	□□□□□ -0.57
PEX25	YPL112C	RVS167	P39743	482 aa	Known RBP	11.52	□□□□□ -0.57
PEX25	YPL112C	RSM25	P40496	264 aa		11.52	□□□□□ -0.57
PEX25	YPL112C	SPC98	P53540	846 aa		11.52	□□□□□ -0.57
PEX25	YPL112C	YLR257W	Q06146	321 aa	Known RBP	11.52	□□□□□ -0.57
PEX25	YPL112C	RLP24	Q07915	199 aa	Known RBP	11.52	□□□□□ -0.57
PEX25	YPL112C	MNL2	Q12205	849 aa		11.52	□□□□□ -0.57
PEX25	YPL112C	CTF3	Q12748	733 aa		11.52	□□□□□ -0.57
PEX25	YPL112C	RDH54	P38086	958 aa		11.51	□□□□□ -0.57
PEX25	YPL112C	PCM1	P38628	557 aa	Known RBP	11.51	□□□□□ -0.57
PEX25	YPL112C	UBP5	P39944	805 aa		11.51	□□□□□ -0.57
PEX25	YPL112C	STP1	Q00947	519 aa		11.51	□□□□□ -0.57
PEX25	YPL112C	CDD1	Q06549	142 aa		11.51	□□□□□ -0.57
PEX25	YPL112C	PLP2	Q12017	286 aa		11.51	□□□□□ -0.57
PEX25	YPL112C	HMT1	P38074	348 aa		11.5	□□□□□ -0.57
PEX25	YPL112C	PTC4	P38089	393 aa		11.5	□□□□□ -0.57
PEX25	YPL112C	BCD1	P38772	366 aa		11.5	□□□□□ -0.57
PEX25	YPL112C	FTR1	P40088	404 aa		11.5	□□□□□ -0.57
PEX25	YPL112C	YGR237C	P50089	785 aa		11.5	□□□□□ -0.57
PEX25	YPL112C	NUT1	P53114	1132 aa		11.5	□□□□□ -0.57
PEX25	YPL112C	CEF1	Q03654	590 aa	Predicted RBP	11.5	□□□□□ -0.57
PEX25	YPL112C	YML083C	Q04526	418 aa		11.5	□□□□□ -0.57
PEX25	YPL112C	SGT2	Q12118	346 aa	Known RBP	11.5	□□□□□ -0.57
PEX25	YPL112C	NAT1	P12945	854 aa	Known RBP	11.49	□□□□□ -0.57
PEX25	YPL112C	VPS3	P23643	1011 aa		11.49	□□□□□ -0.57
PEX25	YPL112C	PEX1	P24004	1043 aa		11.49	□□□□□ -0.57
PEX25	YPL112C	NPR3	P38742	1146 aa		11.49	□□□□□ -0.57
PEX25	YPL112C	SIP5	P40210	489 aa	Known RBP	11.49	□□□□□ -0.57
PEX25	YPL112C	MAF1	P41910	395 aa		11.49	□□□□□ -0.57
PEX25	YPL112C	AIP1	P46680	615 aa	Known RBP	11.49	□□□□□ -0.57
PEX25	YPL112C	TBF1	Q02457	562 aa		11.49	□□□□□ -0.57
PEX25	YPL112C	GIR2	Q03768	265 aa	Predicted RBP	11.49	□□□□□ -0.57
PEX25	YPL112C	SLX4	Q12098	748 aa		11.49	□□□□□ -0.57
PEX25	YPL112C	ATP1	P07251	545 aa	Known RBP	11.48	□□□□□ -0.57
PEX25	YPL112C	TBS1	P38114	1094 aa		11.48	□□□□□ -0.57
PEX25	YPL112C	RRM3	P38766	723 aa		11.48	□□□□□ -0.57
PEX25	YPL112C	DAS1	P47005	663 aa		11.48	□□□□□ -0.57
PEX25	YPL112C	YAP7	Q08182	245 aa		11.48	□□□□□ -0.57
PEX25	YPL112C	GAL80	P04387	435 aa		11.47	□□□□□ -0.57
PEX25	YPL112C	MAS1	P10507	462 aa		11.47	□□□□□ -0.57
PEX25	YPL112C	GSY2	P27472	705 aa		11.47	□□□□□ -0.57
PEX25	YPL112C	COQ8	P27697	501 aa		11.47	□□□□□ -0.57
PEX25	YPL112C	MSP1	P28737	362 aa		11.47	□□□□□ -0.57
PEX25	YPL112C	VPH1	P32563	840 aa	Known RBP	11.47	□□□□□ -0.57
PEX25	YPL112C	SWI3	P32591	825 aa		11.47	□□□□□ -0.57
PEX25	YPL112C	NOP13	P53883	403 aa	Known RBP RIP-Chip data	11.47	□□□□□ -0.57	not detected
PEX25	YPL112C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	11.47	□□□□□ -0.57	not detected
PEX25	YPL112C	GFD1	Q04839	188 aa	Known RBP	11.47	□□□□□ -0.57
PEX25	YPL112C	FAL1	Q12099	399 aa	Known RBP	11.47	□□□□□ -0.57
PEX25	YPL112C	CDC37	P06101	506 aa	Known RBP	11.46	□□□□□ -0.57
PEX25	YPL112C	SNF1	P06782	633 aa	Known RBP	11.46	□□□□□ -0.57
PEX25	YPL112C	KGD2	P19262	463 aa	Predicted RBP	11.46	□□□□□ -0.57
PEX25	YPL112C	IME1	P21190	360 aa		11.46	□□□□□ -0.57
PEX25	YPL112C	RAD27	P26793	382 aa		11.46	□□□□□ -0.57
PEX25	YPL112C	CBF2	P32504	956 aa		11.46	□□□□□ -0.57
PEX25	YPL112C	FYV8	P46949	817 aa	Known RBP	11.46	□□□□□ -0.57
PEX25	YPL112C	EBS1	Q03466	884 aa	Known RBP	11.46	□□□□□ -0.57
PEX25	YPL112C	RGA2	Q06407	1009 aa		11.46	□□□□□ -0.57
PEX25	YPL112C	PGS1	P25578	521 aa		11.45	□□□□□ -0.58
PEX25	YPL112C	ADE17	P38009	592 aa	Known RBP	11.45	□□□□□ -0.58
PEX25	YPL112C	PEX28	P38848	579 aa		11.45	□□□□□ -0.58
PEX25	YPL112C	SMC3	P47037	1230 aa		11.45	□□□□□ -0.58
PEX25	YPL112C	TIF35	Q04067	274 aa	Known RBP	11.45	□□□□□ -0.58
PEX25	YPL112C	HCR1	Q05775	265 aa	Known RBP	11.45	□□□□□ -0.58
PEX25	YPL112C	COG4	Q06096	861 aa		11.45	□□□□□ -0.58
PEX25	YPL112C	IWR1	Q07532	353 aa	Predicted RBP	11.45	□□□□□ -0.58
PEX25	YPL112C	MRC1	P25588	1096 aa		11.44	□□□□□ -0.58
PEX25	YPL112C	RPN12	P32496	274 aa		11.44	□□□□□ -0.58
PEX25	YPL112C	RPC25	P35718	212 aa		11.44	□□□□□ -0.58
PEX25	YPL112C	AGP2	P38090	596 aa		11.44	□□□□□ -0.58
PEX25	YPL112C	KIC1	P38692	1080 aa		11.44	□□□□□ -0.58
PEX25	YPL112C	POL31	P46957	487 aa		11.44	□□□□□ -0.58
PEX25	YPL112C	COS5	P47187	383 aa		11.44	□□□□□ -0.58
PEX25	YPL112C	ALT1	P52893	592 aa		11.44	□□□□□ -0.58

Retrieved 100 of 5,963 RNA–protein pairs in 47.1 ms