RNA–Protein interactions for RNA: YOR378W

AMF1, Transcript of Putative paralog of ATR1, yeastyeast

Gene AMF1, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AMF1YOR378W HXT8P40886 569 aa9.16□□□□□ -0.94
AMF1YOR378W MMM1P41800 426 aa9.16□□□□□ -0.94
AMF1YOR378W LAM5P43560 674 aa9.16□□□□□ -0.94
AMF1YOR378W DAS1P47005 663 aa9.16□□□□□ -0.94
AMF1YOR378W TAD1P53065 400 aa9.16□□□□□ -0.94
AMF1YOR378W SGT2Q12118 346 aaKnown RBP9.16□□□□□ -0.94
AMF1YOR378W GIS3Q12418 502 aa9.16□□□□□ -0.94
AMF1YOR378W YDR524C-BQ3E6R4 66 aa9.16□□□□□ -0.94
AMF1YOR378W COX4P04037 155 aa9.15□□□□□ -0.94
AMF1YOR378W TVP23P38962 199 aa9.15□□□□□ -0.94
AMF1YOR378W CAJ1P39101 391 aa9.15□□□□□ -0.94
AMF1YOR378W INP51P40559 946 aaKnown RBP9.15□□□□□ -0.94
AMF1YOR378W SGM1P47166 707 aa9.15□□□□□ -0.94
AMF1YOR378W ISM1P48526 1002 aa9.15□□□□□ -0.94
AMF1YOR378W YNL134CP53912 376 aaKnown RBP9.15□□□□□ -0.94
AMF1YOR378W CEF1Q03654 590 aaPredicted RBP9.15□□□□□ -0.94
AMF1YOR378W YML082WQ04533 649 aaKnown RBP9.15□□□□□ -0.94
AMF1YOR378W ECM30Q06673 1274 aa9.15□□□□□ -0.94
AMF1YOR378W MOT1P32333 1867 aa9.15□□□□□ -0.95
AMF1YOR378W TOM70P07213 617 aaKnown RBP9.15□□□□□ -0.95
AMF1YOR378W IME1P21190 360 aa9.15□□□□□ -0.95
AMF1YOR378W FUB1P25659 250 aa9.15□□□□□ -0.95
AMF1YOR378W DRE2P36152 348 aa9.15□□□□□ -0.95
AMF1YOR378W CPR7P47103 393 aa9.15□□□□□ -0.95
AMF1YOR378W FMP30Q02883 468 aa9.15□□□□□ -0.95
AMF1YOR378W STE20Q03497 939 aaKnown RBP9.15□□□□□ -0.95
AMF1YOR378W PCD1Q12524 340 aa9.15□□□□□ -0.95
AMF1YOR378W TRP2P00899 507 aaKnown RBP9.14□□□□□ -0.95
AMF1YOR378W SNF1P06782 633 aaKnown RBP9.14□□□□□ -0.95
AMF1YOR378W ASP3-2P0CX77 362 aa9.14□□□□□ -0.95
AMF1YOR378W ASP3-3P0CX78 362 aa9.14□□□□□ -0.95
AMF1YOR378W ASP3-4P0CX79 362 aa9.14□□□□□ -0.95
AMF1YOR378W ASP3-1P0CZ17 362 aa9.14□□□□□ -0.95
AMF1YOR378W RPL4AP10664 362 aaKnown RBP9.14□□□□□ -0.95
AMF1YOR378W CDC42P19073 191 aa9.14□□□□□ -0.95
AMF1YOR378W SDH2P21801 266 aa9.14□□□□□ -0.95
AMF1YOR378W PRR1P28708 518 aa9.14□□□□□ -0.95
AMF1YOR378W CBF2P32504 956 aa9.14□□□□□ -0.95
AMF1YOR378W RPT1P33299 467 aaKnown RBP9.14□□□□□ -0.95
AMF1YOR378W STO1P34160 861 aaKnown RBP9.14□□□□□ -0.95
AMF1YOR378W MCX1P38323 520 aaPredicted RBP9.14□□□□□ -0.95
AMF1YOR378W CCC2P38995 1004 aa9.14□□□□□ -0.95
AMF1YOR378W CLA4P48562 842 aa9.14□□□□□ -0.95
AMF1YOR378W GCV2P49095 1034 aa9.14□□□□□ -0.95
AMF1YOR378W APT1P49435 187 aaKnown RBP9.14□□□□□ -0.95
AMF1YOR378W RPL4BP49626 362 aaKnown RBP9.14□□□□□ -0.95
AMF1YOR378W YPL034WQ03083 165 aa9.14□□□□□ -0.95
AMF1YOR378W CWC21Q03375 135 aaKnown RBP9.14□□□□□ -0.95
AMF1YOR378W LDB19Q12502 818 aa9.14□□□□□ -0.95
AMF1YOR378W ADE4P04046 510 aaKnown RBP9.13□□□□□ -0.95
AMF1YOR378W CDC33P07260 213 aaKnown RBP9.13□□□□□ -0.95
AMF1YOR378W COX11P19516 300 aaKnown RBP9.13□□□□□ -0.95
AMF1YOR378W POT1P27796 417 aaKnown RBP RIP-Chip data9.13□□□□□ -0.95not detected
AMF1YOR378W AVT3P36062 692 aa9.13□□□□□ -0.95
AMF1YOR378W SEC9P40357 651 aa9.13□□□□□ -0.95
AMF1YOR378W EFM4P40516 257 aa9.13□□□□□ -0.95
AMF1YOR378W ULI1P43604 169 aa9.13□□□□□ -0.95
AMF1YOR378W VPS70P47161 811 aa9.13□□□□□ -0.95
AMF1YOR378W ALG11P53954 548 aaKnown RBP9.13□□□□□ -0.95
AMF1YOR378W PPM1Q04081 328 aa9.13□□□□□ -0.95
AMF1YOR378W DAS2Q12084 232 aa9.13□□□□□ -0.95
AMF1YOR378W PET123P17558 318 aa9.12□□□□□ -0.95
AMF1YOR378W RAD57P25301 460 aa9.12□□□□□ -0.95
AMF1YOR378W DAL2P25335 343 aa9.12□□□□□ -0.95
AMF1YOR378W CDC11P32458 415 aa9.12□□□□□ -0.95
AMF1YOR378W CSG2P35206 410 aa9.12□□□□□ -0.95
AMF1YOR378W TRZ1P36159 838 aaPredicted RBP9.12□□□□□ -0.95
AMF1YOR378W UBX7P38349 436 aa9.12□□□□□ -0.95
AMF1YOR378W YHR054CP38780 354 aa9.12□□□□□ -0.95
AMF1YOR378W YMR124WP39523 943 aaKnown RBP9.12□□□□□ -0.95
AMF1YOR378W ALT2P52892 507 aa9.12□□□□□ -0.95
AMF1YOR378W ABP140Q08641 628 aaKnown RBP9.12□□□□□ -0.95
AMF1YOR378W OSH2Q12451 1283 aa9.12□□□□□ -0.95
AMF1YOR378W RIF1P29539 1916 aa9.11□□□□□ -0.95
AMF1YOR378W HXT1P32465 570 aa9.11□□□□□ -0.95
AMF1YOR378W PAM1P37304 830 aaKnown RBP9.11□□□□□ -0.95
AMF1YOR378W YHL026CP38740 315 aa9.11□□□□□ -0.95
AMF1YOR378W KAP123P40069 1113 aaKnown RBP9.11□□□□□ -0.95
AMF1YOR378W YER186CP40101 306 aa9.11□□□□□ -0.95
AMF1YOR378W SBE2P42223 864 aaKnown RBP9.11□□□□□ -0.95
AMF1YOR378W YFL040WP43562 540 aa9.11□□□□□ -0.95
AMF1YOR378W YGR021WP53212 290 aa9.11□□□□□ -0.95
AMF1YOR378W DRN1P53255 507 aaKnown RBP9.11□□□□□ -0.95
AMF1YOR378W YGR130CP53278 816 aa9.11□□□□□ -0.95
AMF1YOR378W PUS1Q12211 544 aaKnown RBP9.11□□□□□ -0.95
AMF1YOR378W AI5_BETAQ9ZZX0 354 aa9.11□□□□□ -0.95
AMF1YOR378W SPT2P06843 333 aaPredicted RBP9.1□□□□□ -0.95
AMF1YOR378W SCJ1P25303 377 aa9.1□□□□□ -0.95
AMF1YOR378W RRT12P25381 491 aa9.1□□□□□ -0.95
AMF1YOR378W SEC21P32074 935 aaKnown RBP9.1□□□□□ -0.95
AMF1YOR378W SRB4P32569 687 aa9.1□□□□□ -0.95
AMF1YOR378W PTC4P38089 393 aa9.1□□□□□ -0.95
AMF1YOR378W EXO5P38289 585 aa9.1□□□□□ -0.95
AMF1YOR378W BRL1P38770 471 aa9.1□□□□□ -0.95
AMF1YOR378W SOV1Q04748 898 aa9.1□□□□□ -0.95
AMF1YOR378W VAC14Q06708 880 aa9.1□□□□□ -0.95
AMF1YOR378W TIF1P10081 395 aaKnown RBP9.1□□□□□ -0.95
AMF1YOR378W TCD1P38756 429 aa9.1□□□□□ -0.95
AMF1YOR378W DYS1P38791 387 aa9.1□□□□□ -0.95
AMF1YOR378W SET5P38890 526 aaKnown RBP9.1□□□□□ -0.95
Retrieved 100 of 5,963 RNA–protein pairs in 47.9 ms