RNA–Protein interactions for RNA: YNL304W

YPT11, Transcript of Rab GTPase, yeastyeast

Gene YPT11, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT11YNL304W ESBP6P53918 673 aa8.86□□□□□ -0.99
YPT11YNL304W STE20Q03497 939 aaKnown RBP8.86□□□□□ -0.99
YPT11YNL304W IWR1Q07532 353 aaPredicted RBP8.86□□□□□ -0.99
YPT11YNL304W SGT2Q12118 346 aaKnown RBP8.86□□□□□ -0.99
YPT11YNL304W SNF1P06782 633 aaKnown RBP8.85□□□□□ -0.99
YPT11YNL304W PET123P17558 318 aa8.85□□□□□ -0.99
YPT11YNL304W FUB1P25659 250 aa8.85□□□□□ -0.99
YPT11YNL304W SRB4P32569 687 aa8.85□□□□□ -0.99
YPT11YNL304W PCH2P38126 564 aa8.85□□□□□ -0.99
YPT11YNL304W SGM1P47166 707 aa8.85□□□□□ -0.99
YPT11YNL304W ISM1P48526 1002 aa8.85□□□□□ -0.99
YPT11YNL304W YDL206WQ12424 762 aa8.85□□□□□ -0.99
YPT11YNL304W CDC33P07260 213 aaKnown RBP8.84□□□□□ -0.99
YPT11YNL304W SEC23P15303 768 aaKnown RBP8.84□□□□□ -0.99
YPT11YNL304W ADE2P21264 571 aaKnown RBP8.84□□□□□ -0.99
YPT11YNL304W RAD54P32863 898 aa8.84□□□□□ -0.99
YPT11YNL304W DRE2P36152 348 aa8.84□□□□□ -0.99
YPT11YNL304W UBP3Q01477 912 aaKnown RBP RIP-Chip data8.84□□□□□ -0.99 RIP-Chip
YPT11YNL304W FMP30Q02883 468 aa8.84□□□□□ -0.99
YPT11YNL304W DOT1Q04089 582 aaKnown RBP8.84□□□□□ -0.99
YPT11YNL304W ZPS1Q12512 249 aa8.84□□□□□ -0.99
YPT11YNL304W PCD1Q12524 340 aa8.84□□□□□ -0.99
YPT11YNL304W TOM70P07213 617 aaKnown RBP8.83□□□□□ -1
YPT11YNL304W ASP3-2P0CX77 362 aa8.83□□□□□ -1
YPT11YNL304W ASP3-3P0CX78 362 aa8.83□□□□□ -1
YPT11YNL304W ASP3-4P0CX79 362 aa8.83□□□□□ -1
YPT11YNL304W ASP3-1P0CZ17 362 aa8.83□□□□□ -1
YPT11YNL304W STO1P34160 861 aaKnown RBP8.83□□□□□ -1
YPT11YNL304W MCX1P38323 520 aaPredicted RBP8.83□□□□□ -1
YPT11YNL304W KAP123P40069 1113 aaKnown RBP8.83□□□□□ -1
YPT11YNL304W INP51P40559 946 aaKnown RBP8.83□□□□□ -1
YPT11YNL304W MMM1P41800 426 aa8.83□□□□□ -1
YPT11YNL304W SBE2P42223 864 aaKnown RBP8.83□□□□□ -1
YPT11YNL304W SAD1P43589 448 aa8.83□□□□□ -1
YPT11YNL304W DAS1P47005 663 aa8.83□□□□□ -1
YPT11YNL304W CPR7P47103 393 aa8.83□□□□□ -1
YPT11YNL304W ALG11P53954 548 aaKnown RBP8.83□□□□□ -1
YPT11YNL304W MUK1Q02866 612 aa8.83□□□□□ -1
YPT11YNL304W GIS3Q12418 502 aa8.83□□□□□ -1
YPT11YNL304W TUP1P16649 713 aa8.82□□□□□ -1
YPT11YNL304W GLN3P18494 730 aa8.82□□□□□ -1
YPT11YNL304W COX11P19516 300 aaKnown RBP8.82□□□□□ -1
YPT11YNL304W PRR1P28708 518 aa8.82□□□□□ -1
YPT11YNL304W SEC21P32074 935 aaKnown RBP8.82□□□□□ -1
YPT11YNL304W YMR124WP39523 943 aaKnown RBP8.82□□□□□ -1
YPT11YNL304W PSY2P40164 858 aa8.82□□□□□ -1
YPT11YNL304W NDC80P40460 691 aa8.82□□□□□ -1
YPT11YNL304W YFL040WP43562 540 aa8.82□□□□□ -1
YPT11YNL304W CLA4P48562 842 aa8.82□□□□□ -1
YPT11YNL304W DRN1P53255 507 aaKnown RBP8.82□□□□□ -1
YPT11YNL304W JJJ1P53863 590 aa8.82□□□□□ -1
YPT11YNL304W VPS60Q03390 229 aa8.82□□□□□ -1
YPT11YNL304W ABP140Q08641 628 aaKnown RBP8.82□□□□□ -1
YPT11YNL304W DAS2Q12084 232 aa8.82□□□□□ -1
YPT11YNL304W PUS1Q12211 544 aaKnown RBP8.82□□□□□ -1
YPT11YNL304W OSH2Q12451 1283 aa8.82□□□□□ -1
YPT11YNL304W YDR524C-BQ3E6R4 66 aa8.82□□□□□ -1
YPT11YNL304W RPL4AP10664 362 aaKnown RBP8.81□□□□□ -1
YPT11YNL304W YAP1801P38856 637 aa8.81□□□□□ -1
YPT11YNL304W SEC9P40357 651 aa8.81□□□□□ -1
YPT11YNL304W GCV2P49095 1034 aa8.81□□□□□ -1
YPT11YNL304W RPL4BP49626 362 aaKnown RBP8.81□□□□□ -1
YPT11YNL304W YPL034WQ03083 165 aa8.81□□□□□ -1
YPT11YNL304W YLR455WQ06188 304 aa8.81□□□□□ -1
YPT11YNL304W SDH5Q08230 162 aa8.81□□□□□ -1
YPT11YNL304W TRP2P00899 507 aaKnown RBP8.8□□□□□ -1
YPT11YNL304W ADE4P04046 510 aaKnown RBP8.8□□□□□ -1
YPT11YNL304W IME1P21190 360 aa8.8□□□□□ -1
YPT11YNL304W EFB1P32471 206 aaKnown RBP8.8□□□□□ -1
YPT11YNL304W RPT1P33299 467 aaKnown RBP8.8□□□□□ -1
YPT11YNL304W CSG2P35206 410 aa8.8□□□□□ -1
YPT11YNL304W YHR054CP38780 354 aa8.8□□□□□ -1
YPT11YNL304W TAD1P53065 400 aa8.8□□□□□ -1
YPT11YNL304W YGR021WP53212 290 aa8.8□□□□□ -1
YPT11YNL304W ECM30Q06673 1274 aa8.8□□□□□ -1
YPT11YNL304W VAC14Q06708 880 aa8.8□□□□□ -1
YPT11YNL304W DNL4Q08387 944 aaPredicted RBP8.8□□□□□ -1
YPT11YNL304W GAL10P04397 699 aa8.79□□□□□ -1
YPT11YNL304W CKI1P20485 582 aa8.79□□□□□ -1
YPT11YNL304W SDH2P21801 266 aa8.79□□□□□ -1
YPT11YNL304W VMA4P22203 233 aaKnown RBP8.79□□□□□ -1
YPT11YNL304W RAD57P25301 460 aa8.79□□□□□ -1
YPT11YNL304W DAL2P25335 343 aa8.79□□□□□ -1
YPT11YNL304W RRT12P25381 491 aa8.79□□□□□ -1
YPT11YNL304W POT1P27796 417 aaKnown RBP RIP-Chip data8.79□□□□□ -1not detected
YPT11YNL304W YKL050CP35736 922 aa8.79□□□□□ -1
YPT11YNL304W EXO5P38289 585 aa8.79□□□□□ -1
YPT11YNL304W TVP23P38962 199 aa8.79□□□□□ -1
YPT11YNL304W SPC72P39723 622 aa8.79□□□□□ -1
YPT11YNL304W ESL1P40456 1118 aa8.79□□□□□ -1
YPT11YNL304W SPO74P45819 413 aa8.79□□□□□ -1
YPT11YNL304W YGR130CP53278 816 aa8.79□□□□□ -1
YPT11YNL304W NOP13P53883 403 aaKnown RBP RIP-Chip data8.79□□□□□ -1not detected
YPT11YNL304W SYH1Q02875 849 aaKnown RBP8.79□□□□□ -1
YPT11YNL304W YMR018WQ04364 514 aa8.79□□□□□ -1
YPT11YNL304W SOV1Q04748 898 aa8.79□□□□□ -1
YPT11YNL304W LDB19Q12502 818 aa8.79□□□□□ -1
YPT11YNL304W COX4P04037 155 aa8.78□□□□□ -1
YPT11YNL304W SPT2P06843 333 aaPredicted RBP8.78□□□□□ -1
YPT11YNL304W CDC42P19073 191 aa8.78□□□□□ -1
Retrieved 100 of 5,963 RNA–protein pairs in 44.5 ms