RNA–Protein interactions for RNA: YNL197C

WHI3, Transcript of RNA binding protein that sequesters CLN3 mRNA in cytoplasmic foci, yeast

Gene WHI3, Length 1,986 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
WHI3	YNL197C	BNA2	P47125	453 aa		4.27	□□□□□ -1.73
WHI3	YNL197C	YGR153W	P48238	217 aa		4.27	□□□□□ -1.73
WHI3	YNL197C	ENV11	P53246	860 aa		4.27	□□□□□ -1.73
WHI3	YNL197C	HSF1	P10961	833 aa		4.27	□□□□□ -1.73
WHI3	YNL197C	ADP1	P25371	1049 aa		4.27	□□□□□ -1.73
WHI3	YNL197C	SER1	P33330	395 aa	Known RBP	4.27	□□□□□ -1.73
WHI3	YNL197C	KAE1	P36132	386 aa		4.27	□□□□□ -1.73
WHI3	YNL197C	DOT6	P40059	670 aa	Known RBP	4.27	□□□□□ -1.73
WHI3	YNL197C	ZIP2	P53061	704 aa		4.27	□□□□□ -1.73
WHI3	YNL197C	DUS1	P53759	423 aa	Known RBP	4.27	□□□□□ -1.73
WHI3	YNL197C	CRR1	Q05790	422 aa		4.27	□□□□□ -1.73
WHI3	YNL197C	RPS9A	O13516	197 aa	Known RBP	4.26	□□□□□ -1.73
WHI3	YNL197C	PRC1	P00729	532 aa		4.26	□□□□□ -1.73
WHI3	YNL197C	TRP3	P00937	484 aa		4.26	□□□□□ -1.73
WHI3	YNL197C	KIN2	P13186	1147 aa	Known RBP	4.26	□□□□□ -1.73
WHI3	YNL197C	HIR1	P32479	840 aa		4.26	□□□□□ -1.73
WHI3	YNL197C	ZRG8	P40021	1076 aa		4.26	□□□□□ -1.73
WHI3	YNL197C	NPY1	P53164	384 aa		4.26	□□□□□ -1.73
WHI3	YNL197C	RSM24	Q03976	319 aa		4.26	□□□□□ -1.73
WHI3	YNL197C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.26	□□□□□ -1.73	not detected
WHI3	YNL197C	RPS21B	Q3E754	87 aa	Known RBP	4.26	□□□□□ -1.73
WHI3	YNL197C	APM4	Q99186	491 aa		4.26	□□□□□ -1.73
WHI3	YNL197C	CYC7	P00045	113 aa		4.25	□□□□□ -1.73
WHI3	YNL197C	SST2	P11972	698 aa	Known RBP	4.25	□□□□□ -1.73
WHI3	YNL197C	HSP78	P33416	811 aa		4.25	□□□□□ -1.73
WHI3	YNL197C	DID4	P36108	232 aa		4.25	□□□□□ -1.73
WHI3	YNL197C	SAP190	P36123	1033 aa		4.25	□□□□□ -1.73
WHI3	YNL197C	FLR1	P38124	548 aa		4.25	□□□□□ -1.73
WHI3	YNL197C	FUI1	P38196	639 aa		4.25	□□□□□ -1.73
WHI3	YNL197C	TDA3	P38758	523 aa		4.25	□□□□□ -1.73
WHI3	YNL197C	YIL108W	P40483	696 aa	Known RBP	4.25	□□□□□ -1.73
WHI3	YNL197C	MND2	P40577	368 aa		4.25	□□□□□ -1.73
WHI3	YNL197C	SHR5	P41912	237 aa		4.25	□□□□□ -1.73
WHI3	YNL197C	RPN7	Q06103	429 aa	Known RBP	4.25	□□□□□ -1.73
WHI3	YNL197C	CYC1	P00044	109 aa	Predicted RBP	4.25	□□□□□ -1.73
WHI3	YNL197C	CMP2	P14747	604 aa		4.25	□□□□□ -1.73
WHI3	YNL197C	HEM12	P32347	362 aa	Predicted RBP	4.25	□□□□□ -1.73
WHI3	YNL197C	YKR073C	P36153	106 aa		4.25	□□□□□ -1.73
WHI3	YNL197C	RRP8	P38961	392 aa	Known RBP	4.25	□□□□□ -1.73
WHI3	YNL197C	HFI1	Q12060	488 aa		4.25	□□□□□ -1.73
WHI3	YNL197C	RMP1	Q12530	201 aa		4.25	□□□□□ -1.73
WHI3	YNL197C	SPE1	P08432	466 aa		4.24	□□□□□ -1.73
WHI3	YNL197C	OAF3	P36023	863 aa		4.24	□□□□□ -1.73
WHI3	YNL197C	VPS24	P36095	224 aa	Known RBP	4.24	□□□□□ -1.73
WHI3	YNL197C	BIT2	P38346	545 aa		4.24	□□□□□ -1.73
WHI3	YNL197C	SSZ1	P38788	538 aa	Known RBP	4.24	□□□□□ -1.73
WHI3	YNL197C	CTF8	P38877	133 aa		4.24	□□□□□ -1.73
WHI3	YNL197C	IES5	P40060	125 aa		4.24	□□□□□ -1.73
WHI3	YNL197C	PCL10	P53124	433 aa		4.24	□□□□□ -1.73
WHI3	YNL197C	BRE5	P53741	515 aa	Known RBP	4.24	□□□□□ -1.73
WHI3	YNL197C	WHI4	Q07655	649 aa	Known RBP	4.24	□□□□□ -1.73
WHI3	YNL197C	ADY3	Q07732	790 aa		4.24	□□□□□ -1.73
WHI3	YNL197C	YDL177C	Q12257	170 aa		4.24	□□□□□ -1.73
WHI3	YNL197C	GAL10	P04397	699 aa		4.23	□□□□□ -1.73
WHI3	YNL197C	ENA1	P13587	1091 aa		4.23	□□□□□ -1.73
WHI3	YNL197C	FAT1	P38225	669 aa		4.23	□□□□□ -1.73
WHI3	YNL197C	URM1	P40554	99 aa	Predicted RBP	4.23	□□□□□ -1.73
WHI3	YNL197C	PBP1	P53297	722 aa	Known RBP	4.23	□□□□□ -1.73
WHI3	YNL197C	ENA2	Q01896	1091 aa		4.23	□□□□□ -1.73
WHI3	YNL197C	MET14	Q02196	202 aa		4.23	□□□□□ -1.73
WHI3	YNL197C	LEE1	Q02799	301 aa	Known RBP	4.23	□□□□□ -1.73
WHI3	YNL197C	PLB2	Q03674	706 aa		4.23	□□□□□ -1.73
WHI3	YNL197C	NSI1	Q12457	570 aa		4.23	□□□□□ -1.73
WHI3	YNL197C	ENA5	Q12691	1091 aa		4.23	□□□□□ -1.73
WHI3	YNL197C	GAL1	P04385	528 aa		4.23	□□□□□ -1.73
WHI3	YNL197C	PWP2	P25635	923 aa	Known RBP	4.23	□□□□□ -1.73
WHI3	YNL197C	STE14	P32584	239 aa		4.23	□□□□□ -1.73
WHI3	YNL197C	SDP1	P40479	209 aa		4.23	□□□□□ -1.73
WHI3	YNL197C	RSC8	P43609	557 aa	Known RBP	4.23	□□□□□ -1.73
WHI3	YNL197C	DAS1	P47005	663 aa		4.23	□□□□□ -1.73
WHI3	YNL197C	YJR039W	P47107	1121 aa		4.23	□□□□□ -1.73
WHI3	YNL197C	PIP2	P52960	996 aa		4.23	□□□□□ -1.73
WHI3	YNL197C	VPS30	Q02948	557 aa		4.23	□□□□□ -1.73
WHI3	YNL197C	ASM4	Q05166	528 aa		4.23	□□□□□ -1.73
WHI3	YNL197C	CDC6	P09119	513 aa		4.22	□□□□□ -1.73
WHI3	YNL197C	MIP6	P38760	659 aa	Known RBP	4.22	□□□□□ -1.73
WHI3	YNL197C	YFL052W	P43551	465 aa		4.22	□□□□□ -1.73
WHI3	YNL197C	PUS2	P53167	370 aa		4.22	□□□□□ -1.73
WHI3	YNL197C	SKY1	Q03656	742 aa		4.22	□□□□□ -1.73
WHI3	YNL197C	PHM6	Q05637	104 aa		4.22	□□□□□ -1.73
WHI3	YNL197C	ATP12	P22135	325 aa		4.22	□□□□□ -1.73
WHI3	YNL197C	POA1	P38218	177 aa		4.22	□□□□□ -1.73
WHI3	YNL197C	ETP1	P38748	585 aa	Known RBP	4.22	□□□□□ -1.73
WHI3	YNL197C	ECM38	Q05902	660 aa	Predicted RBP	4.22	□□□□□ -1.73
WHI3	YNL197C	UPC2	Q12151	913 aa		4.22	□□□□□ -1.73
WHI3	YNL197C	SWI6	P09959	803 aa		4.21	□□□□□ -1.74
WHI3	YNL197C	COX11	P19516	300 aa	Known RBP	4.21	□□□□□ -1.74
WHI3	YNL197C	NIC96	P34077	839 aa		4.21	□□□□□ -1.74
WHI3	YNL197C	ATG19	P35193	415 aa		4.21	□□□□□ -1.74
WHI3	YNL197C	TRZ1	P36159	838 aa	Predicted RBP	4.21	□□□□□ -1.74
WHI3	YNL197C	MAL31	P38156	614 aa		4.21	□□□□□ -1.74
WHI3	YNL197C	BEM4	P39011	633 aa		4.21	□□□□□ -1.74
WHI3	YNL197C	SSY5	P47002	699 aa		4.21	□□□□□ -1.74
WHI3	YNL197C	YHM2	Q04013	314 aa		4.21	□□□□□ -1.74
WHI3	YNL197C	TPO1	Q07824	586 aa		4.21	□□□□□ -1.74
WHI3	YNL197C	NYV1	Q12255	253 aa		4.21	□□□□□ -1.74
WHI3	YNL197C	TUB3	P09734	445 aa	Known RBP	4.2	□□□□□ -1.74
WHI3	YNL197C	CDC26	P14724	124 aa		4.2	□□□□□ -1.74
WHI3	YNL197C	YEF3	P16521	1044 aa	Known RBP	4.2	□□□□□ -1.74
WHI3	YNL197C	PRP4	P20053	465 aa	Known RBP	4.2	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 57.3 ms