RNA–Protein interactions for RNA: YMR048W

CSM3, Transcript of Replication fork associated factor, yeastyeast

Gene CSM3, Length 954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSM3YMR048W REH1Q06709 432 aa5.55□□□□□ -1.52
CSM3YMR048W YOR022CQ12204 715 aa5.55□□□□□ -1.52
CSM3YMR048W PRC1P00729 532 aa5.54□□□□□ -1.52
CSM3YMR048W PPS1P38148 807 aa5.54□□□□□ -1.52
CSM3YMR048W MRPS35P53292 345 aa5.54□□□□□ -1.52
CSM3YMR048W FLC1Q08967 793 aa5.54□□□□□ -1.52
CSM3YMR048W TOM70P07213 617 aaKnown RBP5.53□□□□□ -1.52
CSM3YMR048W MTH1P35198 433 aa5.53□□□□□ -1.52
CSM3YMR048W YHR020WP38708 688 aaKnown RBP5.53□□□□□ -1.52
CSM3YMR048W GYP8P43570 497 aa5.53□□□□□ -1.52
CSM3YMR048W SSY5P47002 699 aa5.53□□□□□ -1.52
CSM3YMR048W TAD1P53065 400 aa5.53□□□□□ -1.52
CSM3YMR048W RSC3Q06639 885 aa5.53□□□□□ -1.52
CSM3YMR048W YBR053CP38235 358 aa5.52□□□□□ -1.53
CSM3YMR048W GGA2P38817 585 aaKnown RBP5.52□□□□□ -1.53
CSM3YMR048W SAK1P38990 1142 aa5.52□□□□□ -1.53
CSM3YMR048W GND2P53319 492 aa5.52□□□□□ -1.53
CSM3YMR048W YDR514CQ04408 483 aa5.52□□□□□ -1.53
CSM3YMR048W THI21Q08975 551 aa5.52□□□□□ -1.53
CSM3YMR048W YLR415CO13578 112 aa5.51□□□□□ -1.53
CSM3YMR048W YCL002CP25565 263 aa5.51□□□□□ -1.53
CSM3YMR048W SPC42P36094 363 aa5.51□□□□□ -1.53
CSM3YMR048W SAP190P36123 1033 aa5.51□□□□□ -1.53
CSM3YMR048W SET5P38890 526 aaKnown RBP5.51□□□□□ -1.53
CSM3YMR048W SDS3P40505 327 aa5.51□□□□□ -1.53
CSM3YMR048W ALG2P43636 503 aa5.51□□□□□ -1.53
CSM3YMR048W NRG1Q03125 231 aa5.51□□□□□ -1.53
CSM3YMR048W YML122CQ03207 126 aa5.51□□□□□ -1.53
CSM3YMR048W LRS4Q04087 347 aaKnown RBP5.51□□□□□ -1.53
CSM3YMR048W YIR042CP40586 236 aa5.5□□□□□ -1.53
CSM3YMR048W PFA3P42836 336 aa5.5□□□□□ -1.53
CSM3YMR048W YJL163CP46996 555 aa5.5□□□□□ -1.53
CSM3YMR048W ATP25Q03153 612 aa5.5□□□□□ -1.53
CSM3YMR048W BET3P36149 193 aa5.49□□□□□ -1.53
CSM3YMR048W RSP5P39940 809 aaKnown RBP5.49□□□□□ -1.53
CSM3YMR048W ZDS1P50111 915 aaKnown RBP5.49□□□□□ -1.53
CSM3YMR048W HUL5P53119 910 aa5.49□□□□□ -1.53
CSM3YMR048W CRR1Q05790 422 aa5.49□□□□□ -1.53
CSM3YMR048W INO80P53115 1489 aa5.48□□□□□ -1.53
CSM3YMR048W LAT1P12695 482 aaKnown RBP5.48□□□□□ -1.53
CSM3YMR048W RIA1P53893 1110 aa5.48□□□□□ -1.53
CSM3YMR048W MET7Q08645 548 aa5.48□□□□□ -1.53
CSM3YMR048W ATG11Q12527 1178 aa5.48□□□□□ -1.53
CSM3YMR048W YBR182C-AQ8TGU6 64 aa5.48□□□□□ -1.53
CSM3YMR048W CAN1P04817 590 aa5.47□□□□□ -1.53
CSM3YMR048W GAL11P19659 1081 aa5.47□□□□□ -1.53
CSM3YMR048W SIC1P38634 284 aa5.47□□□□□ -1.53
CSM3YMR048W RLP7P40693 322 aaKnown RBP5.47□□□□□ -1.53
CSM3YMR048W PHR1P05066 565 aaKnown RBP RIP-Chip data5.46□□□□□ -1.54not detected
CSM3YMR048W SPC29P33419 253 aa5.46□□□□□ -1.54
CSM3YMR048W YBR259WP38338 688 aa5.46□□□□□ -1.54
CSM3YMR048W ATF1P40353 525 aa5.46□□□□□ -1.54
CSM3YMR048W SHR5P41912 237 aa5.46□□□□□ -1.54
CSM3YMR048W HSV2P50079 448 aaPredicted RBP5.46□□□□□ -1.54
CSM3YMR048W RTA1P53047 317 aa5.46□□□□□ -1.54
CSM3YMR048W MRH1Q12117 320 aaPredicted RBP5.46□□□□□ -1.54
CSM3YMR048W MSL5Q12186 476 aaKnown RBP RIP-Chip data5.46□□□□□ -1.54not detected
CSM3YMR048W DIF1O13577 133 aa5.45□□□□□ -1.54
CSM3YMR048W MTR3P48240 250 aaPredicted RBP5.45□□□□□ -1.54
CSM3YMR048W ZIP2P53061 704 aa5.45□□□□□ -1.54
CSM3YMR048W BDF2Q07442 638 aa5.45□□□□□ -1.54
CSM3YMR048W TGL5Q12043 749 aa5.45□□□□□ -1.54
CSM3YMR048W GPR1Q12361 961 aa5.45□□□□□ -1.54
CSM3YMR048W HXT16P47185 567 aa5.44□□□□□ -1.54
CSM3YMR048W SGO1Q08490 590 aa5.44□□□□□ -1.54
CSM3YMR048W IRC13Q08630 104 aa5.44□□□□□ -1.54
CSM3YMR048W SGS1P35187 1447 aa5.43□□□□□ -1.54
CSM3YMR048W STI1P15705 589 aaKnown RBP RIP-Chip data5.43□□□□□ -1.54not detected
CSM3YMR048W CUE2P36075 443 aaKnown RBP5.43□□□□□ -1.54
CSM3YMR048W PCL5P38794 229 aa5.43□□□□□ -1.54
CSM3YMR048W ECM1P39715 212 aa5.43□□□□□ -1.54
CSM3YMR048W FMP52P40008 231 aa5.43□□□□□ -1.54
CSM3YMR048W GFA1P14742 717 aaKnown RBP5.42□□□□□ -1.54
CSM3YMR048W CDC43P18898 376 aa5.42□□□□□ -1.54
CSM3YMR048W HOS4P40480 1083 aa5.42□□□□□ -1.54
CSM3YMR048W NNF1P47149 201 aa5.42□□□□□ -1.54
CSM3YMR048W NSE3Q05541 303 aa5.42□□□□□ -1.54
CSM3YMR048W HIS7P33734 552 aaKnown RBP5.41□□□□□ -1.54
CSM3YMR048W BCD1P38772 366 aa5.41□□□□□ -1.54
CSM3YMR048W BAP3P41815 604 aa5.41□□□□□ -1.54
CSM3YMR048W TY4A-JP47023 414 aa5.41□□□□□ -1.54
CSM3YMR048W UBC11P52492 156 aa5.41□□□□□ -1.54
CSM3YMR048W SSL2Q00578 843 aa5.41□□□□□ -1.54
CSM3YMR048W CDC53Q12018 815 aaKnown RBP5.41□□□□□ -1.54
CSM3YMR048W TCB3Q03640 1545 aaKnown RBP5.41□□□□□ -1.54
CSM3YMR048W CHZ1P40019 153 aaPredicted RBP5.4□□□□□ -1.54
CSM3YMR048W ALY2P47029 1046 aa5.4□□□□□ -1.54
CSM3YMR048W TEL2P53038 688 aa5.4□□□□□ -1.54
CSM3YMR048W YBP2P53169 641 aa5.4□□□□□ -1.54
CSM3YMR048W YAP1802P53309 568 aa5.4□□□□□ -1.54
CSM3YMR048W ASM4Q05166 528 aa5.4□□□□□ -1.54
CSM3YMR048W HCA4P20448 770 aaKnown RBP5.39□□□□□ -1.55
CSM3YMR048W PER1P25625 357 aa5.39□□□□□ -1.55
CSM3YMR048W TEX1P53851 422 aaKnown RBP5.39□□□□□ -1.55
CSM3YMR048W GAD1Q04792 585 aa5.39□□□□□ -1.55
CSM3YMR048W KIN3P22209 435 aa5.38□□□□□ -1.55
CSM3YMR048W TDP1P38319 544 aa5.38□□□□□ -1.55
CSM3YMR048W REV7P38927 245 aa5.38□□□□□ -1.55
CSM3YMR048W GDH3P39708 457 aa5.38□□□□□ -1.55
CSM3YMR048W VPS73P53142 486 aaKnown RBP5.38□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 68 ms