RNA–Protein interactions for RNA: YMR017W

SPO20, Transcript of Meiosis-specific subunit of the t-SNARE complex, yeastyeast

Gene SPO20, Length 1,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPO20YMR017W YHR078WP38799 552 aa5.94□□□□□ -1.46
SPO20YMR017W YDR338CQ05497 695 aa5.94□□□□□ -1.46
SPO20YMR017W THI21Q08975 551 aa5.94□□□□□ -1.46
SPO20YMR017W YLR358CO13565 187 aa5.93□□□□□ -1.46
SPO20YMR017W HOG1P32485 435 aa5.93□□□□□ -1.46
SPO20YMR017W LST4P34239 828 aa5.93□□□□□ -1.46
SPO20YMR017W RPN10P38886 268 aaKnown RBP5.93□□□□□ -1.46
SPO20YMR017W CRR1Q05790 422 aa5.93□□□□□ -1.46
SPO20YMR017W PCL2P25693 308 aa5.92□□□□□ -1.46
SPO20YMR017W YEL1P34225 687 aa5.92□□□□□ -1.46
SPO20YMR017W SEC21P32074 935 aaKnown RBP5.91□□□□□ -1.46
SPO20YMR017W UBP5P39944 805 aa5.91□□□□□ -1.46
SPO20YMR017W IRC24P40580 263 aa5.91□□□□□ -1.46
SPO20YMR017W ZIP2P53061 704 aa5.91□□□□□ -1.46
SPO20YMR017W SDA1P53313 767 aaKnown RBP5.91□□□□□ -1.46
SPO20YMR017W NHX1Q04121 633 aa5.91□□□□□ -1.46
SPO20YMR017W COG8Q04632 607 aa5.91□□□□□ -1.46
SPO20YMR017W SFL1P20134 766 aa5.9□□□□□ -1.46
SPO20YMR017W STE11P23561 717 aa5.9□□□□□ -1.46
SPO20YMR017W SSY5P47002 699 aa5.9□□□□□ -1.46
SPO20YMR017W HLJ1P48353 224 aa5.9□□□□□ -1.46
SPO20YMR017W CLU1Q03690 1277 aaKnown RBP5.9□□□□□ -1.46
SPO20YMR017W MIH1P23748 554 aa5.89□□□□□ -1.47
SPO20YMR017W CRP1P38845 465 aaKnown RBP5.89□□□□□ -1.47
SPO20YMR017W MCM6P53091 1017 aaKnown RBP5.89□□□□□ -1.47
SPO20YMR017W GUP2Q08929 609 aa5.89□□□□□ -1.47
SPO20YMR017W TUB3P09734 445 aaKnown RBP5.88□□□□□ -1.47
SPO20YMR017W HMG1P12683 1054 aa5.88□□□□□ -1.47
SPO20YMR017W KAR4P25583 335 aa5.88□□□□□ -1.47
SPO20YMR017W FLR1P38124 548 aa5.88□□□□□ -1.47
SPO20YMR017W HSL7P38274 827 aa5.88□□□□□ -1.47
SPO20YMR017W PCM1P38628 557 aaKnown RBP5.88□□□□□ -1.47
SPO20YMR017W SAK1P38990 1142 aa5.88□□□□□ -1.47
SPO20YMR017W MSS4P38994 779 aa5.88□□□□□ -1.47
SPO20YMR017W DOT6P40059 670 aaKnown RBP5.88□□□□□ -1.47
SPO20YMR017W YFL052WP43551 465 aa5.88□□□□□ -1.47
SPO20YMR017W MNN10P50108 393 aaKnown RBP5.88□□□□□ -1.47
SPO20YMR017W EXG2P52911 562 aa5.88□□□□□ -1.47
SPO20YMR017W AIM14P53109 570 aa5.88□□□□□ -1.47
SPO20YMR017W NPY1P53164 384 aa5.88□□□□□ -1.47
SPO20YMR017W SLU7Q02775 382 aaKnown RBP5.88□□□□□ -1.47
SPO20YMR017W ATG33Q06485 197 aa5.88□□□□□ -1.47
SPO20YMR017W SWM1Q12379 170 aa5.88□□□□□ -1.47
SPO20YMR017W CAD1P24813 409 aaKnown RBP5.87□□□□□ -1.47
SPO20YMR017W PZF1P39933 429 aa5.87□□□□□ -1.47
SPO20YMR017W MGS1P40151 587 aa5.87□□□□□ -1.47
SPO20YMR017W VHR1P40522 640 aa5.87□□□□□ -1.47
SPO20YMR017W MET13P53128 600 aa5.87□□□□□ -1.47
SPO20YMR017W YNR029CP53729 429 aaKnown RBP5.87□□□□□ -1.47
SPO20YMR017W ASI2P53895 289 aa5.87□□□□□ -1.47
SPO20YMR017W PEX19Q07418 342 aa5.87□□□□□ -1.47
SPO20YMR017W YLR149CQ99296 730 aa5.87□□□□□ -1.47
SPO20YMR017W Q0142Q9ZZW4 58 aa5.87□□□□□ -1.47
SPO20YMR017W NUP145P49687 1317 aa5.86□□□□□ -1.47
SPO20YMR017W YKR051WP36142 418 aa5.86□□□□□ -1.47
SPO20YMR017W MPT5P39016 859 aaKnown RBP RIP-Chip data5.86□□□□□ -1.47not detected
SPO20YMR017W PFA3P42836 336 aa5.86□□□□□ -1.47
SPO20YMR017W BNA2P47125 453 aa5.86□□□□□ -1.47
SPO20YMR017W UBC9P50623 157 aaPredicted RBP5.86□□□□□ -1.47
SPO20YMR017W YGL081WP53156 320 aa5.86□□□□□ -1.47
SPO20YMR017W MUS81Q04149 632 aaPredicted RBP5.86□□□□□ -1.47
SPO20YMR017W GUD1Q07729 489 aa5.86□□□□□ -1.47
SPO20YMR017W THI73Q07904 523 aa5.86□□□□□ -1.47
SPO20YMR017W GIN4Q12263 1142 aa5.86□□□□□ -1.47
SPO20YMR017W PRP4P20053 465 aaKnown RBP5.85□□□□□ -1.47
SPO20YMR017W CTS1P29029 562 aa5.85□□□□□ -1.47
SPO20YMR017W MTR3P48240 250 aaPredicted RBP5.85□□□□□ -1.47
SPO20YMR017W RPN7Q06103 429 aaKnown RBP5.85□□□□□ -1.47
SPO20YMR017W ENB1Q08299 606 aa5.85□□□□□ -1.47
SPO20YMR017W SSD1P24276 1250 aaKnown RBP RIP-Chip data5.84□□□□□ -1.47not detected
SPO20YMR017W PMT3P47190 753 aa5.84□□□□□ -1.47
SPO20YMR017W PKH1Q03407 766 aa5.84□□□□□ -1.47
SPO20YMR017W ASM4Q05166 528 aa5.84□□□□□ -1.47
SPO20YMR017W ESC8Q08119 714 aa5.84□□□□□ -1.47
SPO20YMR017W GPR1Q12361 961 aa5.84□□□□□ -1.47
SPO20YMR017W LAS17Q12446 633 aa5.84□□□□□ -1.47
SPO20YMR017W DCG1P32460 244 aa5.83□□□□□ -1.48
SPO20YMR017W TRM11Q12463 433 aa5.83□□□□□ -1.48
SPO20YMR017W PFK1P16861 987 aaKnown RBP5.82□□□□□ -1.48
SPO20YMR017W CCR4P31384 837 aaKnown RBP5.82□□□□□ -1.48
SPO20YMR017W NGG1P32494 702 aa5.82□□□□□ -1.48
SPO20YMR017W UBP12P39538 1254 aa5.82□□□□□ -1.48
SPO20YMR017W UME1Q03010 460 aa5.82□□□□□ -1.48
SPO20YMR017W YLR415CO13578 112 aa5.81□□□□□ -1.48
SPO20YMR017W TSR4P25040 408 aa5.81□□□□□ -1.48
SPO20YMR017W CTF13P35203 478 aa5.81□□□□□ -1.48
SPO20YMR017W YKR018CP36114 725 aa5.81□□□□□ -1.48
SPO20YMR017W TYS1P36421 394 aaKnown RBP5.81□□□□□ -1.48
SPO20YMR017W SHM2P37291 469 aaKnown RBP5.81□□□□□ -1.48
SPO20YMR017W RPP1P38786 293 aa5.81□□□□□ -1.48
SPO20YMR017W YJR096WP47137 282 aa5.81□□□□□ -1.48
SPO20YMR017W YGR237CP50089 785 aa5.81□□□□□ -1.48
SPO20YMR017W PMA1P05030 918 aaKnown RBP5.8□□□□□ -1.48
SPO20YMR017W HCM1P25364 564 aa5.8□□□□□ -1.48
SPO20YMR017W GRX4P32642 244 aa5.8□□□□□ -1.48
SPO20YMR017W SIC1P38634 284 aa5.8□□□□□ -1.48
SPO20YMR017W TAF1P46677 1066 aa5.8□□□□□ -1.48
SPO20YMR017W PCL10P53124 433 aa5.8□□□□□ -1.48
SPO20YMR017W PRP19P32523 503 aaKnown RBP5.79□□□□□ -1.48
SPO20YMR017W MIP6P38760 659 aaKnown RBP5.79□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 33 ms