RNA–Protein interactions for RNA: YML049C

RSE1, Transcript of Protein involved in pre-mRNA splicing, yeast

Gene RSE1, Length 4,086 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSE1	YML049C	CRD1	Q07560	283 aa		3.1	□□□□□ -1.91
RSE1	YML049C	RIT1	P23796	513 aa		3.09	□□□□□ -1.91
RSE1	YML049C	BRF1	P29056	596 aa		3.09	□□□□□ -1.91
RSE1	YML049C	ANP1	P32629	500 aa		3.09	□□□□□ -1.91
RSE1	YML049C	UGA4	P32837	571 aa		3.09	□□□□□ -1.91
RSE1	YML049C	NDT80	P38830	627 aa		3.09	□□□□□ -1.91
RSE1	YML049C	BAT1	P38891	393 aa	Known RBP	3.09	□□□□□ -1.91
RSE1	YML049C	ULI1	P43604	169 aa		3.09	□□□□□ -1.91
RSE1	YML049C	SCS3	P53012	380 aa		3.09	□□□□□ -1.91
RSE1	YML049C	REC8	Q12188	680 aa		3.09	□□□□□ -1.91
RSE1	YML049C	ERG6	P25087	383 aa	Known RBP	3.09	□□□□□ -1.91
RSE1	YML049C	SRO9	P25567	434 aa	Known RBP	3.09	□□□□□ -1.91
RSE1	YML049C	TCD2	P36101	447 aa	Known RBP	3.09	□□□□□ -1.91
RSE1	YML049C	CTF18	P49956	741 aa		3.09	□□□□□ -1.91
RSE1	YML049C	ALT1	P52893	592 aa		3.09	□□□□□ -1.91
RSE1	YML049C	CWC24	P53769	259 aa		3.09	□□□□□ -1.91
RSE1	YML049C	RSM10	Q03201	203 aa		3.09	□□□□□ -1.91
RSE1	YML049C	EST2	Q06163	884 aa		3.09	□□□□□ -1.91
RSE1	YML049C	YLR456W	Q06199	204 aa		3.09	□□□□□ -1.91
RSE1	YML049C	SPN1	Q06505	410 aa	Predicted RBP	3.09	□□□□□ -1.91
RSE1	YML049C	IRA2	P19158	3079 aa		3.09	□□□□□ -1.91
RSE1	YML049C	COX3	P00420	269 aa		3.09	□□□□□ -1.92
RSE1	YML049C	RPP2B	P02400	110 aa	Known RBP	3.09	□□□□□ -1.92
RSE1	YML049C	ISY1	P21374	235 aa	Predicted RBP	3.09	□□□□□ -1.92
RSE1	YML049C	YNR065C	P53751	1116 aa		3.09	□□□□□ -1.92
RSE1	YML049C	HPF1	Q05164	967 aa		3.09	□□□□□ -1.92
RSE1	YML049C	RAD3	P06839	778 aa		3.09	□□□□□ -1.92
RSE1	YML049C	RNR3	P21672	869 aa	Known RBP	3.09	□□□□□ -1.92
RSE1	YML049C	SWI4	P25302	1093 aa	Known RBP	3.09	□□□□□ -1.92
RSE1	YML049C	KIN82	P25341	720 aa		3.09	□□□□□ -1.92
RSE1	YML049C	CYM1	P32898	989 aa		3.09	□□□□□ -1.92
RSE1	YML049C	PGM1	P33401	570 aa	Known RBP	3.09	□□□□□ -1.92
RSE1	YML049C	YHL017W	P38745	532 aa		3.09	□□□□□ -1.92
RSE1	YML049C	VTC2	P43585	828 aa		3.09	□□□□□ -1.92
RSE1	YML049C	AIM23	P47015	356 aa		3.09	□□□□□ -1.92
RSE1	YML049C	ADA2	Q02336	434 aa		3.09	□□□□□ -1.92
RSE1	YML049C	FUS2	Q05670	677 aa		3.09	□□□□□ -1.92
RSE1	YML049C	ELG1	Q12050	791 aa		3.09	□□□□□ -1.92
RSE1	YML049C	MAK31	P23059	88 aa		3.08	□□□□□ -1.92
RSE1	YML049C	UBS1	P38290	277 aa		3.08	□□□□□ -1.92
RSE1	YML049C	OCA5	P38738	679 aa		3.08	□□□□□ -1.92
RSE1	YML049C	NUP42	P49686	430 aa	Known RBP	3.08	□□□□□ -1.92
RSE1	YML049C	NOP13	P53883	403 aa	Known RBP RIP-Chip data	3.08	□□□□□ -1.92	not detected
RSE1	YML049C	DOT1	Q04089	582 aa	Known RBP	3.08	□□□□□ -1.92
RSE1	YML049C	ESC2	Q06340	456 aa		3.08	□□□□□ -1.92
RSE1	YML049C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	3.08	□□□□□ -1.92	not detected
RSE1	YML049C	UBP11	P36026	717 aa		3.08	□□□□□ -1.92
RSE1	YML049C	PIK1	P39104	1066 aa		3.08	□□□□□ -1.92
RSE1	YML049C	GIP4	P39732	760 aa		3.08	□□□□□ -1.92
RSE1	YML049C	YPT11	P48559	417 aa		3.08	□□□□□ -1.92
RSE1	YML049C	ADY4	Q05955	493 aa		3.08	□□□□□ -1.92
RSE1	YML049C	PUS1	Q12211	544 aa	Known RBP	3.08	□□□□□ -1.92
RSE1	YML049C	VAS1	P07806	1104 aa	Known RBP	3.08	□□□□□ -1.92
RSE1	YML049C	KEX1	P09620	729 aa		3.08	□□□□□ -1.92
RSE1	YML049C	RNR2	P09938	399 aa	Known RBP	3.08	□□□□□ -1.92
RSE1	YML049C	RSA4	P25382	515 aa	Known RBP	3.08	□□□□□ -1.92
RSE1	YML049C	PUS2	P53167	370 aa		3.08	□□□□□ -1.92
RSE1	YML049C	DSE3	Q08729	430 aa		3.08	□□□□□ -1.92
RSE1	YML049C	PRP22	P24384	1145 aa	Known RBP	3.07	□□□□□ -1.92
RSE1	YML049C	PDC6	P26263	563 aa	Known RBP	3.07	□□□□□ -1.92
RSE1	YML049C	DPH2	P32461	534 aa		3.07	□□□□□ -1.92
RSE1	YML049C	SHM1	P37292	490 aa	Predicted RBP	3.07	□□□□□ -1.92
RSE1	YML049C	CIC1	P38779	376 aa	Known RBP	3.07	□□□□□ -1.92
RSE1	YML049C	RPN10	P38886	268 aa	Known RBP	3.07	□□□□□ -1.92
RSE1	YML049C	SIP5	P40210	489 aa	Known RBP	3.07	□□□□□ -1.92
RSE1	YML049C	OSW5	P40219	148 aa		3.07	□□□□□ -1.92
RSE1	YML049C	YJL070C	P40361	888 aa		3.07	□□□□□ -1.92
RSE1	YML049C	AIP1	P46680	615 aa	Known RBP	3.07	□□□□□ -1.92
RSE1	YML049C	MET6	P05694	767 aa	Known RBP	3.07	□□□□□ -1.92
RSE1	YML049C	PBS2	P08018	668 aa		3.07	□□□□□ -1.92
RSE1	YML049C	YEL076C-A	P0CX16	216 aa		3.07	□□□□□ -1.92
RSE1	YML049C	YLR464W	P0CX17	216 aa		3.07	□□□□□ -1.92
RSE1	YML049C	TSA1	P34760	196 aa	Known RBP	3.07	□□□□□ -1.92
RSE1	YML049C	HEL1	P36113	551 aa		3.07	□□□□□ -1.92
RSE1	YML049C	YEL076C	P39971	216 aa		3.07	□□□□□ -1.92
RSE1	YML049C	SHE10	P53075	577 aa		3.07	□□□□□ -1.92
RSE1	YML049C	RET3	P53600	189 aa		3.07	□□□□□ -1.92
RSE1	YML049C	ALG11	P53954	548 aa	Known RBP	3.07	□□□□□ -1.92
RSE1	YML049C	YDL057W	Q07379	328 aa		3.07	□□□□□ -1.92
RSE1	YML049C	HAA1	Q12753	694 aa	Known RBP	3.07	□□□□□ -1.92
RSE1	YML049C	BEM2	P39960	2167 aa	Known RBP	3.07	□□□□□ -1.92
RSE1	YML049C	CIT1	P00890	479 aa		3.07	□□□□□ -1.92
RSE1	YML049C	ALG1	P16661	449 aa		3.07	□□□□□ -1.92
RSE1	YML049C	YKL050C	P35736	922 aa		3.07	□□□□□ -1.92
RSE1	YML049C	KDX1	P36005	433 aa		3.07	□□□□□ -1.92
RSE1	YML049C	AKR1	P39010	764 aa		3.07	□□□□□ -1.92
RSE1	YML049C	BNA5	Q05979	453 aa		3.07	□□□□□ -1.92
RSE1	YML049C	PRX1	P34227	261 aa	Known RBP	3.06	□□□□□ -1.92
RSE1	YML049C	SRX1	P36077	127 aa		3.06	□□□□□ -1.92
RSE1	YML049C	DUG2	P38149	878 aa		3.06	□□□□□ -1.92
RSE1	YML049C	ATG12	P38316	186 aa		3.06	□□□□□ -1.92
RSE1	YML049C	UBX7	P38349	436 aa		3.06	□□□□□ -1.92
RSE1	YML049C	CRP1	P38845	465 aa	Known RBP	3.06	□□□□□ -1.92
RSE1	YML049C	TGL3	P40308	642 aa		3.06	□□□□□ -1.92
RSE1	YML049C	TIF35	Q04067	274 aa	Known RBP	3.06	□□□□□ -1.92
RSE1	YML049C	LEA1	Q08963	238 aa	Predicted RBP	3.06	□□□□□ -1.92
RSE1	YML049C	YOR111W	Q99210	232 aa		3.06	□□□□□ -1.92
RSE1	YML049C	CSF1	Q12150	2958 aa		3.06	□□□□□ -1.92
RSE1	YML049C	YCL042W	P25572	119 aa		3.06	□□□□□ -1.92
RSE1	YML049C	TAD1	P53065	400 aa		3.06	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms