RNA–Protein interactions for RNA: YLR022C

SDO1, Transcript of Guanine nucleotide exchange factor (GEF) for Ria1p, yeastyeast

Gene SDO1, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDO1YLR022C FIG2P25653 1609 aa4.35□□□□□ -1.71
SDO1YLR022C OSM1P21375 501 aaKnown RBP4.34□□□□□ -1.71
SDO1YLR022C STE11P23561 717 aa4.34□□□□□ -1.71
SDO1YLR022C YAP1801P38856 637 aa4.34□□□□□ -1.71
SDO1YLR022C MND2P40577 368 aa4.34□□□□□ -1.71
SDO1YLR022C SHE9Q04172 456 aa4.34□□□□□ -1.71
SDO1YLR022C XYL2Q07993 356 aa4.34□□□□□ -1.71
SDO1YLR022C LPD1P09624 499 aaKnown RBP4.33□□□□□ -1.72
SDO1YLR022C PAH1P32567 862 aa4.33□□□□□ -1.72
SDO1YLR022C GIC1P38785 314 aa4.33□□□□□ -1.72
SDO1YLR022C YBP2P53169 641 aa4.33□□□□□ -1.72
SDO1YLR022C GTF1P53260 183 aaPredicted RBP4.33□□□□□ -1.72
SDO1YLR022C CWC24P53769 259 aa4.33□□□□□ -1.72
SDO1YLR022C TRM44Q02648 567 aaKnown RBP4.33□□□□□ -1.72
SDO1YLR022C SRT1Q03175 343 aa4.33□□□□□ -1.72
SDO1YLR022C YML122CQ03207 126 aa4.33□□□□□ -1.72
SDO1YLR022C YAP6Q03935 383 aa4.33□□□□□ -1.72
SDO1YLR022C OPI10Q08202 246 aa4.33□□□□□ -1.72
SDO1YLR022C FAS2P19097 1887 aaKnown RBP4.32□□□□□ -1.72
SDO1YLR022C EMC1P25574 760 aa4.32□□□□□ -1.72
SDO1YLR022C FUN30P31380 1131 aa4.32□□□□□ -1.72
SDO1YLR022C CDC12P32468 407 aaKnown RBP4.32□□□□□ -1.72
SDO1YLR022C TRM2P33753 639 aa4.32□□□□□ -1.72
SDO1YLR022C LST4P34239 828 aa4.32□□□□□ -1.72
SDO1YLR022C YKL069WP36088 180 aa4.32□□□□□ -1.72
SDO1YLR022C MCM6P53091 1017 aaKnown RBP4.32□□□□□ -1.72
SDO1YLR022C RRT6P53117 311 aaPredicted RBP4.32□□□□□ -1.72
SDO1YLR022C YGR117CP53270 476 aa4.32□□□□□ -1.72
SDO1YLR022C BDF2Q07442 638 aa4.32□□□□□ -1.72
SDO1YLR022C ADY3Q07732 790 aa4.32□□□□□ -1.72
SDO1YLR022C NOP12Q08208 459 aaKnown RBP4.32□□□□□ -1.72
SDO1YLR022C OSW2Q12202 724 aa4.32□□□□□ -1.72
SDO1YLR022C CAF20P12962 161 aaKnown RBP4.31□□□□□ -1.72
SDO1YLR022C HCM1P25364 564 aa4.31□□□□□ -1.72
SDO1YLR022C VBA5P36172 582 aa4.31□□□□□ -1.72
SDO1YLR022C MBP1P39678 833 aa4.31□□□□□ -1.72
SDO1YLR022C ZRG8P40021 1076 aa4.31□□□□□ -1.72
SDO1YLR022C BUD27P43573 796 aaKnown RBP RIP-Chip data4.31□□□□□ -1.72not detected
SDO1YLR022C MET12P46151 657 aa4.31□□□□□ -1.72
SDO1YLR022C GUS1P46655 708 aaKnown RBP RIP-Chip data4.31□□□□□ -1.72not detected
SDO1YLR022C GCV2P49095 1034 aa4.31□□□□□ -1.72
SDO1YLR022C NOP7P53261 605 aaKnown RBP4.31□□□□□ -1.72
SDO1YLR022C CDA1Q06702 301 aa4.31□□□□□ -1.72
SDO1YLR022C TPO1Q07824 586 aa4.31□□□□□ -1.72
SDO1YLR022C PUS9Q12069 462 aa4.31□□□□□ -1.72
SDO1YLR022C NUM1Q00402 2748 aa4.3□□□□□ -1.72
SDO1YLR022C HPR1P17629 752 aaKnown RBP4.3□□□□□ -1.72
SDO1YLR022C ECM21P38167 1117 aaKnown RBP4.3□□□□□ -1.72
SDO1YLR022C SAH1P39954 449 aaKnown RBP4.3□□□□□ -1.72
SDO1YLR022C MSE1P48525 536 aa4.3□□□□□ -1.72
SDO1YLR022C MNN10P50108 393 aaKnown RBP4.3□□□□□ -1.72
SDO1YLR022C VPS4P52917 437 aa4.3□□□□□ -1.72
SDO1YLR022C SUN4P53616 420 aa4.3□□□□□ -1.72
SDO1YLR022C ALD6P54115 500 aaKnown RBP4.3□□□□□ -1.72
SDO1YLR022C SRP1Q02821 542 aaKnown RBP4.3□□□□□ -1.72
SDO1YLR022C RBA50Q04418 439 aa4.3□□□□□ -1.72
SDO1YLR022C YLR224WQ05947 369 aa4.3□□□□□ -1.72
SDO1YLR022C SSM4P40318 1319 aa4.29□□□□□ -1.72
SDO1YLR022C RPP2AP05319 106 aaKnown RBP4.29□□□□□ -1.72
SDO1YLR022C PRI2P20457 528 aa4.29□□□□□ -1.72
SDO1YLR022C RPC82P32349 654 aa4.29□□□□□ -1.72
SDO1YLR022C MRP8P35719 219 aa4.29□□□□□ -1.72
SDO1YLR022C POA1P38218 177 aa4.29□□□□□ -1.72
SDO1YLR022C VAC8P39968 578 aa4.29□□□□□ -1.72
SDO1YLR022C NPP2P39997 493 aa4.29□□□□□ -1.72
SDO1YLR022C YGR012WP53206 393 aa4.29□□□□□ -1.72
SDO1YLR022C SLI1P53304 468 aa4.29□□□□□ -1.72
SDO1YLR022C HIS5P07172 385 aa4.28□□□□□ -1.72
SDO1YLR022C ENA1P13587 1091 aa4.28□□□□□ -1.72
SDO1YLR022C YKR078WP36158 585 aaKnown RBP4.28□□□□□ -1.72
SDO1YLR022C SPF1P39986 1215 aaKnown RBP4.28□□□□□ -1.72
SDO1YLR022C GYP7P48365 746 aa4.28□□□□□ -1.72
SDO1YLR022C PHO23P50947 330 aa4.28□□□□□ -1.72
SDO1YLR022C ENA2Q01896 1091 aa4.28□□□□□ -1.72
SDO1YLR022C DUS3Q06053 668 aaKnown RBP4.28□□□□□ -1.72
SDO1YLR022C ENA5Q12691 1091 aa4.28□□□□□ -1.72
SDO1YLR022C IKI3Q06706 1349 aaKnown RBP4.27□□□□□ -1.73
SDO1YLR022C SPE1P08432 466 aa4.27□□□□□ -1.73
SDO1YLR022C HSF1P10961 833 aa4.27□□□□□ -1.73
SDO1YLR022C SPE2P21182 396 aa4.27□□□□□ -1.73
SDO1YLR022C SRP101P32916 621 aa4.27□□□□□ -1.73
SDO1YLR022C SER1P33330 395 aaKnown RBP4.27□□□□□ -1.73
SDO1YLR022C PBY1P38254 753 aa4.27□□□□□ -1.73
SDO1YLR022C CHA4P43634 648 aa4.27□□□□□ -1.73
SDO1YLR022C HSP104P31539 908 aaKnown RBP4.26□□□□□ -1.73
SDO1YLR022C STV1P37296 890 aa4.26□□□□□ -1.73
SDO1YLR022C YBR238CP38330 731 aaKnown RBP4.26□□□□□ -1.73
SDO1YLR022C TSL1P38427 1098 aaKnown RBP4.26□□□□□ -1.73
SDO1YLR022C CCC2P38995 1004 aa4.26□□□□□ -1.73
SDO1YLR022C PLB1P39105 664 aa4.26□□□□□ -1.73
SDO1YLR022C SIT1P39980 628 aa4.26□□□□□ -1.73
SDO1YLR022C YER158CP40095 573 aa4.26□□□□□ -1.73
SDO1YLR022C IRR1P40541 1150 aa4.26□□□□□ -1.73
SDO1YLR022C SFB2P53953 876 aa4.26□□□□□ -1.73
SDO1YLR022C DIB1Q06819 143 aaPredicted RBP4.26□□□□□ -1.73
SDO1YLR022C NTO1Q12311 748 aa4.26□□□□□ -1.73
SDO1YLR022C TOR1P35169 2470 aa4.26□□□□□ -1.73
SDO1YLR022C PMD1P32634 1753 aa4.25□□□□□ -1.73
SDO1YLR022C TAO3P40468 2376 aa4.25□□□□□ -1.73
SDO1YLR022C PMA1P05030 918 aaKnown RBP4.25□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 75.2 ms