RNA–Protein interactions for RNA: YLR005W

SSL1, Transcript of Subunit of the core form of RNA polymerase transcription factor TFIIH, yeastyeast

Gene SSL1, Length 1,386 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSL1YLR005W PDR18P53756 1333 aa4.55□□□□□ -1.68
SSL1YLR005W TOR2P32600 2474 aaKnown RBP4.55□□□□□ -1.68
SSL1YLR005W KRS1P15180 591 aaKnown RBP4.54□□□□□ -1.68
SSL1YLR005W SRP40P32583 406 aaPredicted RBP4.54□□□□□ -1.68
SSL1YLR005W RVB2Q12464 471 aaKnown RBP4.54□□□□□ -1.68
SSL1YLR005W RAD61Q99359 647 aa4.54□□□□□ -1.68
SSL1YLR005W MYO1P08964 1928 aa4.54□□□□□ -1.68
SSL1YLR005W NOT3P06102 836 aaKnown RBP4.53□□□□□ -1.68
SSL1YLR005W GAS1P22146 559 aaKnown RBP4.53□□□□□ -1.68
SSL1YLR005W UTR4P32626 227 aa4.53□□□□□ -1.68
SSL1YLR005W BCS1P32839 456 aa4.53□□□□□ -1.68
SSL1YLR005W PBY1P38254 753 aa4.53□□□□□ -1.68
SSL1YLR005W PHO88P38264 188 aaPredicted RBP4.53□□□□□ -1.68
SSL1YLR005W ATG14P38270 344 aa4.53□□□□□ -1.68
SSL1YLR005W RRP8P38961 392 aaKnown RBP4.53□□□□□ -1.68
SSL1YLR005W NOC2P39744 710 aaKnown RBP4.53□□□□□ -1.68
SSL1YLR005W ECL1P48235 211 aa4.53□□□□□ -1.68
SSL1YLR005W RSA3Q05942 220 aaKnown RBP4.53□□□□□ -1.68
SSL1YLR005W MRD1Q06106 887 aaKnown RBP4.53□□□□□ -1.68
SSL1YLR005W RAD18P10862 487 aa4.53□□□□□ -1.69
SSL1YLR005W HEM13P11353 328 aaKnown RBP4.53□□□□□ -1.69
SSL1YLR005W VMA4P22203 233 aaKnown RBP4.53□□□□□ -1.69
SSL1YLR005W SEC8P32855 1065 aa4.53□□□□□ -1.69
SSL1YLR005W NMD2P38798 1089 aaKnown RBP4.53□□□□□ -1.69
SSL1YLR005W VPS8P39702 1274 aa4.53□□□□□ -1.69
SSL1YLR005W UBP5P39944 805 aa4.53□□□□□ -1.69
SSL1YLR005W VID27P40157 782 aa4.53□□□□□ -1.69
SSL1YLR005W YMR147WP40218 223 aaKnown RBP4.53□□□□□ -1.69
SSL1YLR005W MCM6P53091 1017 aaKnown RBP4.53□□□□□ -1.69
SSL1YLR005W YGL140CP53120 1219 aa4.53□□□□□ -1.69
SSL1YLR005W YPL109CQ02981 657 aa4.53□□□□□ -1.69
SSL1YLR005W ADI1Q03677 179 aa4.53□□□□□ -1.69
SSL1YLR005W BUL2Q03758 920 aaKnown RBP4.53□□□□□ -1.69
SSL1YLR005W LPX1Q12405 387 aaKnown RBP4.53□□□□□ -1.69
SSL1YLR005W TOR1P35169 2470 aa4.52□□□□□ -1.69
SSL1YLR005W SNA3P14359 133 aa4.52□□□□□ -1.69
SSL1YLR005W SEC20P28791 383 aa4.52□□□□□ -1.69
SSL1YLR005W CHS3P29465 1165 aa4.52□□□□□ -1.69
SSL1YLR005W MCM4P30665 933 aaKnown RBP4.52□□□□□ -1.69
SSL1YLR005W KTR3P38130 404 aaPredicted RBP4.52□□□□□ -1.69
SSL1YLR005W ECM21P38167 1117 aaKnown RBP4.52□□□□□ -1.69
SSL1YLR005W SKP2P42843 763 aa4.52□□□□□ -1.69
SSL1YLR005W ISA1Q07821 250 aaPredicted RBP4.52□□□□□ -1.69
SSL1YLR005W TAH18Q12181 623 aa4.52□□□□□ -1.69
SSL1YLR005W CLF1Q12309 687 aaPredicted RBP4.52□□□□□ -1.69
SSL1YLR005W RTP1Q12751 981 aa4.52□□□□□ -1.69
SSL1YLR005W RIF1P29539 1916 aa4.51□□□□□ -1.69
SSL1YLR005W TY1B-AO13527 1196 aaKnown RBP4.51□□□□□ -1.69
SSL1YLR005W HXK1P04806 485 aaKnown RBP4.51□□□□□ -1.69
SSL1YLR005W SCP160P06105 1222 aaKnown RBP RIP-Chip data4.51□□□□□ -1.69not detected
SSL1YLR005W DED1P06634 604 aaKnown RBP4.51□□□□□ -1.69
SSL1YLR005W POX1P13711 748 aa4.51□□□□□ -1.69
SSL1YLR005W TFC4P33339 1025 aa4.51□□□□□ -1.69
SSL1YLR005W RDH54P38086 958 aa4.51□□□□□ -1.69
SSL1YLR005W HSE1P38753 452 aa4.51□□□□□ -1.69
SSL1YLR005W PIC2P40035 300 aa4.51□□□□□ -1.69
SSL1YLR005W RSC8P43609 557 aaKnown RBP4.51□□□□□ -1.69
SSL1YLR005W FOL2P51601 243 aaKnown RBP4.51□□□□□ -1.69
SSL1YLR005W RMD1Q03441 430 aa4.51□□□□□ -1.69
SSL1YLR005W SPH1Q06160 661 aa4.51□□□□□ -1.69
SSL1YLR005W GUD1Q07729 489 aa4.51□□□□□ -1.69
SSL1YLR005W SAM1P10659 382 aaKnown RBP4.5□□□□□ -1.69
SSL1YLR005W SAM35P14693 329 aa4.5□□□□□ -1.69
SSL1YLR005W OPI1P21957 404 aa4.5□□□□□ -1.69
SSL1YLR005W TGL1P34163 548 aa4.5□□□□□ -1.69
SSL1YLR005W ADD66P36040 267 aa4.5□□□□□ -1.69
SSL1YLR005W YHL012WP38709 493 aa4.5□□□□□ -1.69
SSL1YLR005W QNS1P38795 714 aaKnown RBP4.5□□□□□ -1.69
SSL1YLR005W JHD1P40034 492 aa4.5□□□□□ -1.69
SSL1YLR005W YJL045WP47052 634 aa4.5□□□□□ -1.69
SSL1YLR005W DAK1P54838 584 aaKnown RBP4.5□□□□□ -1.69
SSL1YLR005W ESF1Q06344 628 aaKnown RBP4.5□□□□□ -1.69
SSL1YLR005W BRE1Q07457 700 aaKnown RBP4.5□□□□□ -1.69
SSL1YLR005W YDR524C-BQ3E6R4 66 aa4.5□□□□□ -1.69
SSL1YLR005W HIP1P06775 603 aa4.49□□□□□ -1.69
SSL1YLR005W SAM2P19358 384 aaKnown RBP4.49□□□□□ -1.69
SSL1YLR005W YUR1P26725 428 aa4.49□□□□□ -1.69
SSL1YLR005W POT1P27796 417 aaKnown RBP RIP-Chip data4.49□□□□□ -1.69not detected
SSL1YLR005W MCR1P36060 302 aaKnown RBP4.49□□□□□ -1.69
SSL1YLR005W VPS45P38932 577 aa4.49□□□□□ -1.69
SSL1YLR005W LSB1P53281 241 aa4.49□□□□□ -1.69
SSL1YLR005W ORC3P54790 616 aa4.49□□□□□ -1.69
SSL1YLR005W SLD5Q03406 294 aa4.49□□□□□ -1.69
SSL1YLR005W EST2Q06163 884 aa4.49□□□□□ -1.69
SSL1YLR005W TRM11Q12463 433 aa4.49□□□□□ -1.69
SSL1YLR005W TKL1P23254 680 aaKnown RBP4.48□□□□□ -1.69
SSL1YLR005W POA1P38218 177 aa4.48□□□□□ -1.69
SSL1YLR005W FOL1P53848 824 aa4.48□□□□□ -1.69
SSL1YLR005W VPS30Q02948 557 aa4.48□□□□□ -1.69
SSL1YLR005W DUS3Q06053 668 aaKnown RBP4.48□□□□□ -1.69
SSL1YLR005W CDA2Q06703 312 aa4.48□□□□□ -1.69
SSL1YLR005W HRK1Q08732 759 aaKnown RBP4.48□□□□□ -1.69
SSL1YLR005W SSF2Q12153 453 aaPredicted RBP4.48□□□□□ -1.69
SSL1YLR005W ERP3Q12403 225 aa4.48□□□□□ -1.69
SSL1YLR005W YDR034W-BQ6Q5X2 51 aa4.48□□□□□ -1.69
SSL1YLR005W CDC16P09798 840 aa4.47□□□□□ -1.69
SSL1YLR005W COQ1P18900 473 aa4.47□□□□□ -1.69
SSL1YLR005W MCM2P29469 868 aa4.47□□□□□ -1.69
SSL1YLR005W AIM26P32858 118 aa4.47□□□□□ -1.69
SSL1YLR005W SHP1P34223 423 aa4.47□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 116.3 ms