RNA–Protein interactions for RNA: YKR040C

YKR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YKR040C, Length 504 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YKR040CYKR040C CDC37P06101 506 aaKnown RBP12.63□□□□□ -0.39
YKR040CYKR040C ADE17P38009 592 aaKnown RBP12.63□□□□□ -0.39
YKR040CYKR040C YHR131CP38835 850 aa12.63□□□□□ -0.39
YKR040CYKR040C AIP1P46680 615 aaKnown RBP12.63□□□□□ -0.39
YKR040CYKR040C SPP1Q03012 353 aa12.63□□□□□ -0.39
YKR040CYKR040C RCR2Q03446 210 aaKnown RBP12.63□□□□□ -0.39
YKR040CYKR040C EBS1Q03466 884 aaKnown RBP12.63□□□□□ -0.39
YKR040CYKR040C HCR1Q05775 265 aaKnown RBP12.63□□□□□ -0.39
YKR040CYKR040C COG4Q06096 861 aa12.63□□□□□ -0.39
YKR040CYKR040C HAP2P06774 265 aa12.62□□□□□ -0.39
YKR040CYKR040C CIT2P08679 460 aa12.62□□□□□ -0.39
YKR040CYKR040C NAT1P12945 854 aaKnown RBP12.62□□□□□ -0.39
YKR040CYKR040C CYS3P31373 394 aaKnown RBP12.62□□□□□ -0.39
YKR040CYKR040C SYN8P31377 255 aa12.62□□□□□ -0.39
YKR040CYKR040C GCS1P35197 352 aa12.62□□□□□ -0.39
YKR040CYKR040C STB5P38699 743 aa12.62□□□□□ -0.39
YKR040CYKR040C YHR054CP38780 354 aa12.62□□□□□ -0.39
YKR040CYKR040C FTR1P40088 404 aa12.62□□□□□ -0.39
YKR040CYKR040C DAS1P47005 663 aa12.62□□□□□ -0.39
YKR040CYKR040C MRI1Q06489 411 aaKnown RBP12.62□□□□□ -0.39
YKR040CYKR040C CTF3Q12748 733 aa12.62□□□□□ -0.39
YKR040CYKR040C MRC1P25588 1096 aa12.61□□□□□ -0.39
YKR040CYKR040C YEL023CP39992 682 aa12.61□□□□□ -0.39
YKR040CYKR040C TBF1Q02457 562 aa12.61□□□□□ -0.39
YKR040CYKR040C GFD1Q04839 188 aaKnown RBP12.61□□□□□ -0.39
YKR040CYKR040C FAL1Q12099 399 aaKnown RBP12.61□□□□□ -0.39
YKR040CYKR040C SNU56Q03782 492 aaKnown RBP12.6□□□□□ -0.39
YKR040CYKR040C CDD1Q06549 142 aa12.6□□□□□ -0.39
YKR040CYKR040C YAP7Q08182 245 aa12.6□□□□□ -0.39
YKR040CYKR040C SLX4Q12098 748 aa12.6□□□□□ -0.39
YKR040CYKR040C YLR422WQ06409 1932 aa12.6□□□□□ -0.39
YKR040CYKR040C IME1P21190 360 aa12.59□□□□□ -0.39
YKR040CYKR040C PTC4P38089 393 aa12.59□□□□□ -0.39
YKR040CYKR040C APM2P38700 605 aa12.59□□□□□ -0.39
YKR040CYKR040C OYE3P41816 400 aaPredicted RBP12.59□□□□□ -0.39
YKR040CYKR040C STP1Q00947 519 aa12.59□□□□□ -0.39
YKR040CYKR040C CEF1Q03654 590 aaPredicted RBP12.59□□□□□ -0.39
YKR040CYKR040C YML083CQ04526 418 aa12.59□□□□□ -0.39
YKR040CYKR040C RGA2Q06407 1009 aa12.59□□□□□ -0.39
YKR040CYKR040C VPS3P23643 1011 aa12.58□□□□□ -0.4
YKR040CYKR040C SWI3P32591 825 aa12.58□□□□□ -0.4
YKR040CYKR040C PEX2P32800 271 aa12.58□□□□□ -0.4
YKR040CYKR040C ARL1P38116 183 aaKnown RBP12.58□□□□□ -0.4
YKR040CYKR040C CTM1P38818 585 aa12.58□□□□□ -0.4
YKR040CYKR040C COS5P47187 383 aa12.58□□□□□ -0.4
YKR040CYKR040C EAF7P53911 425 aaKnown RBP12.58□□□□□ -0.4
YKR040CYKR040C LCD1Q04377 747 aa12.58□□□□□ -0.4
YKR040CYKR040C MNL2Q12205 849 aa12.58□□□□□ -0.4
YKR040CYKR040C TFC8Q12308 588 aa12.58□□□□□ -0.4
YKR040CYKR040C HMT1P38074 348 aa12.57□□□□□ -0.4
YKR040CYKR040C CCC2P38995 1004 aa12.57□□□□□ -0.4
YKR040CYKR040C SIP5P40210 489 aaKnown RBP12.57□□□□□ -0.4
YKR040CYKR040C YIR016WP40572 265 aa12.57□□□□□ -0.4
YKR040CYKR040C FIG4P42837 879 aa12.57□□□□□ -0.4
YKR040CYKR040C POL31P46957 487 aa12.57□□□□□ -0.4
YKR040CYKR040C NUT1P53114 1132 aa12.57□□□□□ -0.4
YKR040CYKR040C SPC98P53540 846 aa12.57□□□□□ -0.4
YKR040CYKR040C RPA49Q01080 415 aaPredicted RBP12.57□□□□□ -0.4
YKR040CYKR040C IWR1Q07532 353 aaPredicted RBP12.57□□□□□ -0.4
YKR040CYKR040C SPO75Q07798 868 aa12.57□□□□□ -0.4
YKR040CYKR040C PLP2Q12017 286 aa12.57□□□□□ -0.4
YKR040CYKR040C APL1P27351 700 aa12.56□□□□□ -0.4
YKR040CYKR040C YET1P35723 206 aa12.56□□□□□ -0.4
YKR040CYKR040C SMC3P47037 1230 aa12.56□□□□□ -0.4
YKR040CYKR040C ALT1P52893 592 aa12.56□□□□□ -0.4
YKR040CYKR040C TIF35Q04067 274 aaKnown RBP12.56□□□□□ -0.4
YKR040CYKR040C GIS3Q12418 502 aa12.56□□□□□ -0.4
YKR040CYKR040C ATP1P07251 545 aaKnown RBP12.55□□□□□ -0.4
YKR040CYKR040C ATE1P16639 503 aa12.55□□□□□ -0.4
YKR040CYKR040C VPH1P32563 840 aaKnown RBP12.55□□□□□ -0.4
YKR040CYKR040C RPC25P35718 212 aa12.55□□□□□ -0.4
YKR040CYKR040C YKL023WP36103 277 aaKnown RBP12.55□□□□□ -0.4
YKR040CYKR040C TBS1P38114 1094 aa12.55□□□□□ -0.4
YKR040CYKR040C PCM1P38628 557 aaKnown RBP12.55□□□□□ -0.4
YKR040CYKR040C MAF1P41910 395 aa12.55□□□□□ -0.4
YKR040CYKR040C FYV8P46949 817 aaKnown RBP12.55□□□□□ -0.4
YKR040CYKR040C NOP13P53883 403 aaKnown RBP RIP-Chip data12.55□□□□□ -0.4not detected
YKR040CYKR040C YLR257WQ06146 321 aaKnown RBP12.55□□□□□ -0.4
YKR040CYKR040C DAP1Q12091 152 aa12.55□□□□□ -0.4
YKR040CYKR040C GAL80P04387 435 aa12.54□□□□□ -0.4
YKR040CYKR040C KGD2P19262 463 aaPredicted RBP12.54□□□□□ -0.4
YKR040CYKR040C RAD27P26793 382 aa12.54□□□□□ -0.4
YKR040CYKR040C CBF2P32504 956 aa12.54□□□□□ -0.4
YKR040CYKR040C PSY4P38193 441 aa12.54□□□□□ -0.4
YKR040CYKR040C KAP123P40069 1113 aaKnown RBP12.54□□□□□ -0.4
YKR040CYKR040C YLR297WQ05899 129 aa12.54□□□□□ -0.4
YKR040CYKR040C ABP140Q08641 628 aaKnown RBP12.54□□□□□ -0.4
YKR040CYKR040C RRT12P25381 491 aa12.53□□□□□ -0.4
YKR040CYKR040C EFM2P38347 419 aa12.53□□□□□ -0.4
YKR040CYKR040C KIC1P38692 1080 aa12.53□□□□□ -0.4
YKR040CYKR040C UBP3Q01477 912 aaKnown RBP RIP-Chip data12.53□□□□□ -0.4not detected
YKR040CYKR040C STE20Q03497 939 aaKnown RBP12.53□□□□□ -0.4
YKR040CYKR040C PIG1Q06216 648 aa12.53□□□□□ -0.4
YKR040CYKR040C TMA16Q08687 178 aa12.53□□□□□ -0.4
YKR040CYKR040C YDL206WQ12424 762 aa12.53□□□□□ -0.4
YKR040CYKR040C CDC42P19073 191 aa12.52□□□□□ -0.41
YKR040CYKR040C AGP2P38090 596 aa12.52□□□□□ -0.41
YKR040CYKR040C SPT8P38915 602 aa12.52□□□□□ -0.41
YKR040CYKR040C MGA2P40578 1113 aa12.52□□□□□ -0.41
YKR040CYKR040C CPR7P47103 393 aa12.52□□□□□ -0.41
Retrieved 100 of 5,963 RNA–protein pairs in 41 ms