RNA–Protein interactions for RNA: YJR036C

HUL4, Transcript of Protein with similarity to hect domain E3 ubiquitin-protein ligases, yeast

Gene HUL4, Length 2,679 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HUL4	YJR036C	LYS4	P49367	693 aa	Predicted RBP	4.93	□□□□□ -1.62
HUL4	YJR036C	ECM9	Q02202	377 aa		4.93	□□□□□ -1.62
HUL4	YJR036C	GAD1	Q04792	585 aa		4.93	□□□□□ -1.62
HUL4	YJR036C	TRM8	Q12009	286 aa		4.93	□□□□□ -1.62
HUL4	YJR036C	PFK1	P16861	987 aa	Known RBP	4.92	□□□□□ -1.62
HUL4	YJR036C	MRPL33	P20084	86 aa		4.92	□□□□□ -1.62
HUL4	YJR036C	PUP2	P32379	260 aa		4.92	□□□□□ -1.62
HUL4	YJR036C	YEL1	P34225	687 aa		4.92	□□□□□ -1.62
HUL4	YJR036C	DSS1	P39112	969 aa		4.92	□□□□□ -1.62
HUL4	YJR036C	PKP1	P40530	394 aa		4.92	□□□□□ -1.62
HUL4	YJR036C	STU2	P46675	888 aa		4.92	□□□□□ -1.62
HUL4	YJR036C	SCY1	P53009	804 aa		4.92	□□□□□ -1.62
HUL4	YJR036C	VPS9	P54787	451 aa		4.92	□□□□□ -1.62
HUL4	YJR036C	YPL107W	Q02873	248 aa		4.92	□□□□□ -1.62
HUL4	YJR036C	SNZ1	Q03148	297 aa		4.92	□□□□□ -1.62
HUL4	YJR036C	COG8	Q04632	607 aa		4.92	□□□□□ -1.62
HUL4	YJR036C	RKM4	Q12504	494 aa		4.92	□□□□□ -1.62
HUL4	YJR036C	YJU2	P28320	278 aa	Predicted RBP	4.92	□□□□□ -1.62
HUL4	YJR036C	NAM7	P30771	971 aa	Known RBP	4.92	□□□□□ -1.62
HUL4	YJR036C	ASF2	P32448	525 aa	Predicted RBP	4.92	□□□□□ -1.62
HUL4	YJR036C	NIP1	P32497	812 aa	Known RBP	4.92	□□□□□ -1.62
HUL4	YJR036C	PRP19	P32523	503 aa	Known RBP	4.92	□□□□□ -1.62
HUL4	YJR036C	CCT5	P40413	562 aa	Known RBP	4.92	□□□□□ -1.62
HUL4	YJR036C	INA22	P40576	216 aa		4.92	□□□□□ -1.62
HUL4	YJR036C	MNN11	P46985	422 aa	Known RBP	4.92	□□□□□ -1.62
HUL4	YJR036C	SHE4	P51534	789 aa		4.92	□□□□□ -1.62
HUL4	YJR036C	HLR1	Q04429	423 aa		4.92	□□□□□ -1.62
HUL4	YJR036C	HDA2	Q06629	674 aa		4.92	□□□□□ -1.62
HUL4	YJR036C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.92	□□□□□ -1.62	not detected
HUL4	YJR036C	ENT1	Q12518	454 aa		4.92	□□□□□ -1.62
HUL4	YJR036C	YIL002W-A	Q3E7Z5	69 aa		4.92	□□□□□ -1.62
HUL4	YJR036C	PET111	P08468	800 aa		4.91	□□□□□ -1.62
HUL4	YJR036C	APE1	P14904	514 aa		4.91	□□□□□ -1.62
HUL4	YJR036C	CKA1	P15790	372 aa		4.91	□□□□□ -1.62
HUL4	YJR036C	NCP1	P16603	691 aa	Known RBP	4.91	□□□□□ -1.62
HUL4	YJR036C	HXT6	P39003	570 aa	Known RBP	4.91	□□□□□ -1.62
HUL4	YJR036C	HXT7	P39004	570 aa		4.91	□□□□□ -1.62
HUL4	YJR036C	FET5	P43561	622 aa		4.91	□□□□□ -1.62
HUL4	YJR036C	UBP6	P43593	499 aa	Known RBP	4.91	□□□□□ -1.62
HUL4	YJR036C	YMR018W	Q04364	514 aa		4.91	□□□□□ -1.62
HUL4	YJR036C	YDR338C	Q05497	695 aa		4.91	□□□□□ -1.62
HUL4	YJR036C	YDL206W	Q12424	762 aa		4.91	□□□□□ -1.62
HUL4	YJR036C	PAR32	Q12515	295 aa	Known RBP	4.91	□□□□□ -1.62
HUL4	YJR036C	CTT1	P06115	562 aa		4.91	□□□□□ -1.62
HUL4	YJR036C	CDC16	P09798	840 aa		4.91	□□□□□ -1.62
HUL4	YJR036C	HOP1	P20050	605 aa		4.91	□□□□□ -1.62
HUL4	YJR036C	MLS1	P30952	554 aa		4.91	□□□□□ -1.62
HUL4	YJR036C	EFB1	P32471	206 aa	Known RBP	4.91	□□□□□ -1.62
HUL4	YJR036C	MDL1	P33310	695 aa		4.91	□□□□□ -1.62
HUL4	YJR036C	CCL1	P37366	393 aa		4.91	□□□□□ -1.62
HUL4	YJR036C	DED81	P38707	554 aa	Known RBP	4.91	□□□□□ -1.62
HUL4	YJR036C	STL1	P39932	569 aa		4.91	□□□□□ -1.62
HUL4	YJR036C	YEL068C	P39977	110 aa		4.91	□□□□□ -1.62
HUL4	YJR036C	VPS53	P47061	822 aa		4.91	□□□□□ -1.62
HUL4	YJR036C	YNR061C	P53747	219 aa		4.91	□□□□□ -1.62
HUL4	YJR036C	RRN5	Q02983	363 aa		4.91	□□□□□ -1.62
HUL4	YJR036C	RPS21A	P0C0V8	87 aa	Known RBP	4.9	□□□□□ -1.62
HUL4	YJR036C	RPS6A	P0CX37	236 aa	Known RBP	4.9	□□□□□ -1.62
HUL4	YJR036C	RPS6B	P0CX38	236 aa	Predicted RBP	4.9	□□□□□ -1.62
HUL4	YJR036C	MTF2	P10849	440 aa		4.9	□□□□□ -1.62
HUL4	YJR036C	GUK1	P15454	187 aa	Known RBP	4.9	□□□□□ -1.62
HUL4	YJR036C	PRP28	P23394	588 aa		4.9	□□□□□ -1.62
HUL4	YJR036C	MNE1	P24720	663 aa		4.9	□□□□□ -1.62
HUL4	YJR036C	KRE6	P32486	720 aa		4.9	□□□□□ -1.62
HUL4	YJR036C	SIF2	P38262	535 aa		4.9	□□□□□ -1.62
HUL4	YJR036C	RTS1	P38903	757 aa		4.9	□□□□□ -1.62
HUL4	YJR036C	SNF12	P53628	566 aa		4.9	□□□□□ -1.62
HUL4	YJR036C	CPR6	P53691	371 aa	Known RBP	4.9	□□□□□ -1.62
HUL4	YJR036C	PEX25	Q02969	394 aa		4.9	□□□□□ -1.62
HUL4	YJR036C	YDL124W	Q07551	312 aa	Known RBP	4.9	□□□□□ -1.62
HUL4	YJR036C	HAL9	Q12180	1030 aa		4.9	□□□□□ -1.62
HUL4	YJR036C	PSY3	Q12318	242 aa		4.9	□□□□□ -1.62
HUL4	YJR036C	FRE6	Q12473	712 aa		4.9	□□□□□ -1.62
HUL4	YJR036C	YBL111C	Q3E7Y5	667 aa		4.9	□□□□□ -1.62
HUL4	YJR036C	MET17	P06106	444 aa		4.9	□□□□□ -1.63
HUL4	YJR036C	SES1	P07284	462 aa	Known RBP	4.9	□□□□□ -1.63
HUL4	YJR036C	SWI5	P08153	709 aa		4.9	□□□□□ -1.63
HUL4	YJR036C	KEX2	P13134	814 aa		4.9	□□□□□ -1.63
HUL4	YJR036C	COX11	P19516	300 aa	Known RBP	4.9	□□□□□ -1.63
HUL4	YJR036C	SUI2	P20459	304 aa	Known RBP	4.9	□□□□□ -1.63
HUL4	YJR036C	YKT6	P36015	200 aa	Known RBP	4.9	□□□□□ -1.63
HUL4	YJR036C	SEC28	P40509	296 aa	Known RBP	4.9	□□□□□ -1.63
HUL4	YJR036C	XKS1	P42826	600 aa		4.9	□□□□□ -1.63
HUL4	YJR036C	PUS4	P48567	403 aa	Known RBP	4.9	□□□□□ -1.63
HUL4	YJR036C	NNF2	P53253	936 aa		4.9	□□□□□ -1.63
HUL4	YJR036C	MFB1	Q04922	465 aa		4.9	□□□□□ -1.63
HUL4	YJR036C	BLS1	Q06071	122 aa		4.9	□□□□□ -1.63
HUL4	YJR036C	ISR1	Q06098	443 aa	Known RBP	4.9	□□□□□ -1.63
HUL4	YJR036C	ARP7	Q12406	477 aa		4.9	□□□□□ -1.63
HUL4	YJR036C	ADF1	Q2V2Q1	113 aa		4.9	□□□□□ -1.63
HUL4	YJR036C	JIP3	O13555	125 aa		4.9	□□□□□ -1.63
HUL4	YJR036C	YER152C	P10356	443 aa		4.9	□□□□□ -1.63
HUL4	YJR036C	PHO81	P17442	1178 aa		4.9	□□□□□ -1.63
HUL4	YJR036C	RPB4	P20433	221 aa	Predicted RBP	4.9	□□□□□ -1.63
HUL4	YJR036C	LAM1	P38851	1228 aa		4.9	□□□□□ -1.63
HUL4	YJR036C	MBP1	P39678	833 aa		4.9	□□□□□ -1.63
HUL4	YJR036C	YCK3	P39962	524 aa		4.9	□□□□□ -1.63
HUL4	YJR036C	OSW5	P40219	148 aa		4.9	□□□□□ -1.63
HUL4	YJR036C	YFL034W	P43564	1073 aa		4.9	□□□□□ -1.63
HUL4	YJR036C	TCB2	P48231	1178 aa		4.9	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 32.4 ms