RNA–Protein interactions for RNA: YJL001W

PRE3, Transcript of Beta 1 subunit of the 20S proteasome, yeastyeast

Gene PRE3, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE3YJL001W PDC6P26263 563 aaKnown RBP7.04□□□□□ -1.28
PRE3YJL001W NUP85P46673 744 aa7.04□□□□□ -1.28
PRE3YJL001W YJL045WP47052 634 aa7.04□□□□□ -1.28
PRE3YJL001W YJR098CP47139 656 aa7.04□□□□□ -1.28
PRE3YJL001W LSC2P53312 427 aa7.04□□□□□ -1.28
PRE3YJL001W SPR28Q04921 423 aa7.04□□□□□ -1.28
PRE3YJL001W YDR341CQ05506 607 aaKnown RBP7.04□□□□□ -1.28
PRE3YJL001W PHM6Q05637 104 aa7.04□□□□□ -1.28
PRE3YJL001W PIG1Q06216 648 aa7.04□□□□□ -1.28
PRE3YJL001W TY1A-DR3Q12441 440 aa7.04□□□□□ -1.28
PRE3YJL001W STI1P15705 589 aaKnown RBP RIP-Chip data7.03□□□□□ -1.28not detected
PRE3YJL001W DID4P36108 232 aa7.03□□□□□ -1.28
PRE3YJL001W GIP1P38229 639 aa7.03□□□□□ -1.28
PRE3YJL001W CCT3P39077 534 aaKnown RBP7.03□□□□□ -1.28
PRE3YJL001W PSY2P40164 858 aa7.03□□□□□ -1.28
PRE3YJL001W GPD2P41911 440 aaKnown RBP7.03□□□□□ -1.28
PRE3YJL001W ZPR1P53303 486 aaKnown RBP7.03□□□□□ -1.28
PRE3YJL001W MET6P05694 767 aaKnown RBP7.02□□□□□ -1.29
PRE3YJL001W RPC31P17890 251 aa7.02□□□□□ -1.29
PRE3YJL001W ADK2P26364 225 aa7.02□□□□□ -1.29
PRE3YJL001W EFT1P32324 842 aaKnown RBP7.02□□□□□ -1.29
PRE3YJL001W APM2P38700 605 aa7.02□□□□□ -1.29
PRE3YJL001W RPS26AP39938 119 aaKnown RBP7.02□□□□□ -1.29
PRE3YJL001W RPS26BP39939 119 aaKnown RBP7.02□□□□□ -1.29
PRE3YJL001W YTA12P40341 825 aa7.02□□□□□ -1.29
PRE3YJL001W IRC10Q08118 586 aa7.02□□□□□ -1.29
PRE3YJL001W SGO1Q08490 590 aa7.02□□□□□ -1.29
PRE3YJL001W YOR296WQ08748 1289 aa7.02□□□□□ -1.29
PRE3YJL001W LEU1P07264 779 aaKnown RBP7.01□□□□□ -1.29
PRE3YJL001W TPM1P17536 199 aaKnown RBP7.01□□□□□ -1.29
PRE3YJL001W PEP7P32609 515 aa7.01□□□□□ -1.29
PRE3YJL001W BUD2P33314 1104 aa7.01□□□□□ -1.29
PRE3YJL001W YHL026CP38740 315 aa7.01□□□□□ -1.29
PRE3YJL001W ESL1P40456 1118 aa7.01□□□□□ -1.29
PRE3YJL001W SEN1Q00416 2231 aaKnown RBP7□□□□□ -1.29
PRE3YJL001W DED1P06634 604 aaKnown RBP7□□□□□ -1.29
PRE3YJL001W SRO9P25567 434 aaKnown RBP7□□□□□ -1.29
PRE3YJL001W IMG2P25642 146 aaPredicted RBP7□□□□□ -1.29
PRE3YJL001W MRPL7P36519 292 aa7□□□□□ -1.29
PRE3YJL001W YAP1801P38856 637 aa7□□□□□ -1.29
PRE3YJL001W AKR1P39010 764 aa7□□□□□ -1.29
PRE3YJL001W CNM67P53865 581 aaKnown RBP7□□□□□ -1.29
PRE3YJL001W YNL134CP53912 376 aaKnown RBP7□□□□□ -1.29
PRE3YJL001W AIM33Q04516 312 aa7□□□□□ -1.29
PRE3YJL001W PCD1Q12524 340 aa7□□□□□ -1.29
PRE3YJL001W ADE2P21264 571 aaKnown RBP6.99□□□□□ -1.29
PRE3YJL001W CDC48P25694 835 aaKnown RBP6.99□□□□□ -1.29
PRE3YJL001W SAF1P38352 637 aa6.99□□□□□ -1.29
PRE3YJL001W YHL008CP38750 627 aa6.99□□□□□ -1.29
PRE3YJL001W CCC2P38995 1004 aa6.99□□□□□ -1.29
PRE3YJL001W COQ9Q05779 260 aa6.99□□□□□ -1.29
PRE3YJL001W YDL176WQ12027 708 aa6.99□□□□□ -1.29
PRE3YJL001W WHI2P12611 486 aa6.98□□□□□ -1.29
PRE3YJL001W BET2P20133 325 aa6.98□□□□□ -1.29
PRE3YJL001W NAB2P32505 525 aaKnown RBP RIP-Chip data6.98□□□□□ -1.29not detected
PRE3YJL001W PGM1P33401 570 aaKnown RBP6.98□□□□□ -1.29
PRE3YJL001W BRN1P38170 754 aa6.98□□□□□ -1.29
PRE3YJL001W RXT2P38255 430 aa6.98□□□□□ -1.29
PRE3YJL001W AIM46P38885 310 aa6.98□□□□□ -1.29
PRE3YJL001W GAA1P39012 614 aa6.98□□□□□ -1.29
PRE3YJL001W MMF1P40185 145 aaKnown RBP6.98□□□□□ -1.29
PRE3YJL001W PCI8P40512 444 aa6.98□□□□□ -1.29
PRE3YJL001W CIT3P43635 486 aa6.98□□□□□ -1.29
PRE3YJL001W YGL138CP53122 345 aa6.98□□□□□ -1.29
PRE3YJL001W BNI5P53890 448 aaKnown RBP6.98□□□□□ -1.29
PRE3YJL001W YLR346CQ06139 101 aa6.98□□□□□ -1.29
PRE3YJL001W HIF1Q12373 385 aa6.98□□□□□ -1.29
PRE3YJL001W ILV1P00927 576 aaKnown RBP6.97□□□□□ -1.29
PRE3YJL001W SNF1P06782 633 aaKnown RBP6.97□□□□□ -1.29
PRE3YJL001W CYC8P14922 966 aa6.97□□□□□ -1.29
PRE3YJL001W SEC21P32074 935 aaKnown RBP6.97□□□□□ -1.29
PRE3YJL001W YHR202WP38887 602 aa6.97□□□□□ -1.29
PRE3YJL001W EAF5P39995 279 aa6.97□□□□□ -1.29
PRE3YJL001W MOB1P40484 314 aa6.97□□□□□ -1.29
PRE3YJL001W YIR016WP40572 265 aa6.97□□□□□ -1.29
PRE3YJL001W MAD1P40957 749 aa6.97□□□□□ -1.29
PRE3YJL001W ALT2P52892 507 aa6.97□□□□□ -1.29
PRE3YJL001W DIP5P53388 608 aa6.97□□□□□ -1.29
PRE3YJL001W ROD1Q02805 837 aa6.97□□□□□ -1.29
PRE3YJL001W GIS4Q04233 774 aa6.97□□□□□ -1.29
PRE3YJL001W DAL4Q04895 635 aa6.97□□□□□ -1.29
PRE3YJL001W YCS4Q06156 1176 aa6.97□□□□□ -1.29
PRE3YJL001W SMD2Q06217 110 aaKnown RBP6.97□□□□□ -1.29
PRE3YJL001W HFI1Q12060 488 aa6.97□□□□□ -1.29
PRE3YJL001W IRA1P18963 3092 aa6.97□□□□□ -1.29
PRE3YJL001W FLP1P03870 423 aa6.96□□□□□ -1.3
PRE3YJL001W APE1P14904 514 aa6.96□□□□□ -1.3
PRE3YJL001W RGP1P16664 663 aa6.96□□□□□ -1.3
PRE3YJL001W PRP22P24384 1145 aaKnown RBP6.96□□□□□ -1.3
PRE3YJL001W TMT1P32643 299 aa6.96□□□□□ -1.3
PRE3YJL001W SAS3P34218 831 aa6.96□□□□□ -1.3
PRE3YJL001W YKL097CP34245 136 aa6.96□□□□□ -1.3
PRE3YJL001W GCS1P35197 352 aa6.96□□□□□ -1.3
PRE3YJL001W PEX28P38848 579 aa6.96□□□□□ -1.3
PRE3YJL001W FIS1P40515 155 aa6.96□□□□□ -1.3
PRE3YJL001W MAF1P41910 395 aa6.96□□□□□ -1.3
PRE3YJL001W JJJ3P47138 172 aa6.96□□□□□ -1.3
PRE3YJL001W NNF1P47149 201 aa6.96□□□□□ -1.3
PRE3YJL001W SKP1P52286 194 aa6.96□□□□□ -1.3
PRE3YJL001W HXT17P53631 564 aa6.96□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 30.5 ms