RNA–Protein interactions for RNA: YIL126W

STH1, Transcript of ATPase component of the RSC chromatin remodeling complex, yeast

Gene STH1, Length 4,080 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
STH1	YIL126W	HSP42	Q12329	375 aa		2.35	□□□□□ -2.03
STH1	YIL126W	LAM4	P38800	1345 aa		2.35	□□□□□ -2.03
STH1	YIL126W	BIK1	P11709	440 aa		2.34	□□□□□ -2.03
STH1	YIL126W	RSR1	P13856	272 aa		2.34	□□□□□ -2.03
STH1	YIL126W	RRP43	P25359	394 aa	Predicted RBP	2.34	□□□□□ -2.03
STH1	YIL126W	RPC53	P25441	422 aa		2.34	□□□□□ -2.03
STH1	YIL126W	ASH1	P34233	588 aa		2.34	□□□□□ -2.03
STH1	YIL126W	MRP8	P35719	219 aa		2.34	□□□□□ -2.03
STH1	YIL126W	VPS51	P36116	164 aa		2.34	□□□□□ -2.03
STH1	YIL126W	MRPL10	P36520	322 aa		2.34	□□□□□ -2.03
STH1	YIL126W	PGM2	P37012	569 aa	Known RBP	2.34	□□□□□ -2.03
STH1	YIL126W	BOI1	P38041	980 aa	Known RBP	2.34	□□□□□ -2.03
STH1	YIL126W	IFA38	P38286	347 aa		2.34	□□□□□ -2.03
STH1	YIL126W	ORC6	P38826	435 aa		2.34	□□□□□ -2.03
STH1	YIL126W	CST6	P40535	587 aa		2.34	□□□□□ -2.03
STH1	YIL126W	YIR042C	P40586	236 aa		2.34	□□□□□ -2.03
STH1	YIL126W	GSM1	P42950	618 aa		2.34	□□□□□ -2.03
STH1	YIL126W	CSN12	P47130	423 aa		2.34	□□□□□ -2.03
STH1	YIL126W	ILM1	P47155	203 aa		2.34	□□□□□ -2.03
STH1	YIL126W	SHE10	P53075	577 aa		2.34	□□□□□ -2.03
STH1	YIL126W	ELA1	P53861	379 aa	Predicted RBP	2.34	□□□□□ -2.03
STH1	YIL126W	ALF1	P53904	254 aa		2.34	□□□□□ -2.03
STH1	YIL126W	TOF2	Q02208	771 aa		2.34	□□□□□ -2.03
STH1	YIL126W	GYL1	Q04322	720 aa		2.34	□□□□□ -2.03
STH1	YIL126W	POB3	Q04636	552 aa	Known RBP	2.34	□□□□□ -2.03
STH1	YIL126W	NNT1	Q05874	261 aa		2.34	□□□□□ -2.03
STH1	YIL126W	ISU2	Q12056	156 aa		2.34	□□□□□ -2.03
STH1	YIL126W	MED2	Q12124	431 aa		2.34	□□□□□ -2.03
STH1	YIL126W	TY3B-I	Q7LHG5	1498 aa	Known RBP	2.34	□□□□□ -2.03
STH1	YIL126W	NUP192	P47054	1683 aa		2.34	□□□□□ -2.03
STH1	YIL126W	MDM35	O60200	86 aa		2.34	□□□□□ -2.03
STH1	YIL126W	RPS6A	P0CX37	236 aa	Known RBP	2.34	□□□□□ -2.03
STH1	YIL126W	RPS6B	P0CX38	236 aa	Predicted RBP	2.34	□□□□□ -2.03
STH1	YIL126W	DAL7	P21826	554 aa		2.34	□□□□□ -2.03
STH1	YIL126W	MRPL25	P23369	157 aa		2.34	□□□□□ -2.03
STH1	YIL126W	CLB2	P24869	491 aa		2.34	□□□□□ -2.03
STH1	YIL126W	HIR2	P32480	875 aa		2.34	□□□□□ -2.03
STH1	YIL126W	PET112	P33893	541 aa		2.34	□□□□□ -2.03
STH1	YIL126W	BMH2	P34730	273 aa	Known RBP	2.34	□□□□□ -2.03
STH1	YIL126W	YHL026C	P38740	315 aa		2.34	□□□□□ -2.03
STH1	YIL126W	MET18	P40469	1032 aa		2.34	□□□□□ -2.03
STH1	YIL126W	VTC4	P47075	721 aa		2.34	□□□□□ -2.03
STH1	YIL126W	CCM1	P48237	864 aa	Predicted RBP	2.34	□□□□□ -2.03
STH1	YIL126W	KRE33	P53914	1056 aa	Known RBP	2.34	□□□□□ -2.03
STH1	YIL126W	SEC5	P89102	971 aa		2.34	□□□□□ -2.03
STH1	YIL126W	IRC4	Q03036	179 aa		2.34	□□□□□ -2.03
STH1	YIL126W	RPN4	Q03465	531 aa		2.34	□□□□□ -2.03
STH1	YIL126W	HRD3	Q05787	833 aa		2.34	□□□□□ -2.03
STH1	YIL126W	ATG17	Q06410	417 aa		2.34	□□□□□ -2.03
STH1	YIL126W	NOB1	Q08444	459 aa	Known RBP	2.34	□□□□□ -2.03
STH1	YIL126W	TIF1	P10081	395 aa	Known RBP	2.34	□□□□□ -2.04
STH1	YIL126W	MAS1	P10507	462 aa		2.34	□□□□□ -2.04
STH1	YIL126W	SSB1	P11484	613 aa	Known RBP	2.34	□□□□□ -2.04
STH1	YIL126W	CMP2	P14747	604 aa		2.34	□□□□□ -2.04
STH1	YIL126W	RPB4	P20433	221 aa	Predicted RBP	2.34	□□□□□ -2.04
STH1	YIL126W	CLN1	P20437	546 aa		2.34	□□□□□ -2.04
STH1	YIL126W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	2.34	□□□□□ -2.04	not detected
STH1	YIL126W	SRM1	P21827	482 aa		2.34	□□□□□ -2.04
STH1	YIL126W	MEF1	P25039	761 aa		2.34	□□□□□ -2.04
STH1	YIL126W	HCM1	P25364	564 aa		2.34	□□□□□ -2.04
STH1	YIL126W	MCM5	P29496	775 aa	Known RBP	2.34	□□□□□ -2.04
STH1	YIL126W	RPN12	P32496	274 aa		2.34	□□□□□ -2.04
STH1	YIL126W	SSE1	P32589	693 aa	Known RBP	2.34	□□□□□ -2.04
STH1	YIL126W	NGR1	P32831	672 aa	Known RBP	2.34	□□□□□ -2.04
STH1	YIL126W	HSP78	P33416	811 aa		2.34	□□□□□ -2.04
STH1	YIL126W	BIM1	P40013	344 aa		2.34	□□□□□ -2.04
STH1	YIL126W	SSB2	P40150	613 aa	Known RBP	2.34	□□□□□ -2.04
STH1	YIL126W	NUP42	P49686	430 aa	Known RBP	2.34	□□□□□ -2.04
STH1	YIL126W	DIP5	P53388	608 aa		2.34	□□□□□ -2.04
STH1	YIL126W	MEH1	Q02205	184 aa		2.34	□□□□□ -2.04
STH1	YIL126W	ELP4	Q02884	456 aa	Known RBP	2.34	□□□□□ -2.04
STH1	YIL126W	FCP1	Q03254	732 aa		2.34	□□□□□ -2.04
STH1	YIL126W	VPS20	Q04272	221 aa		2.34	□□□□□ -2.04
STH1	YIL126W	DBP9	Q06218	594 aa	Known RBP	2.34	□□□□□ -2.04
STH1	YIL126W	CDC73	Q06697	393 aa		2.34	□□□□□ -2.04
STH1	YIL126W	LAP2	Q10740	671 aa		2.34	□□□□□ -2.04
STH1	YIL126W	APC2	Q12440	853 aa		2.34	□□□□□ -2.04
STH1	YIL126W	ATP1	P07251	545 aa	Known RBP	2.33	□□□□□ -2.04
STH1	YIL126W	CDC16	P09798	840 aa		2.33	□□□□□ -2.04
STH1	YIL126W	COY1	P34237	679 aa		2.33	□□□□□ -2.04
STH1	YIL126W	JNM1	P36224	373 aa		2.33	□□□□□ -2.04
STH1	YIL126W	MRPL40	P36534	297 aa		2.33	□□□□□ -2.04
STH1	YIL126W	MTW1	P39731	289 aa		2.33	□□□□□ -2.04
STH1	YIL126W	ARB1	P40024	610 aa	Known RBP	2.33	□□□□□ -2.04
STH1	YIL126W	ACF4	P47129	309 aa		2.33	□□□□□ -2.04
STH1	YIL126W	ASI1	P54074	624 aa		2.33	□□□□□ -2.04
STH1	YIL126W	SSL2	Q00578	843 aa		2.33	□□□□□ -2.04
STH1	YIL126W	HAP5	Q02516	242 aa		2.33	□□□□□ -2.04
STH1	YIL126W	ECM30	Q06673	1274 aa		2.33	□□□□□ -2.04
STH1	YIL126W	CMS1	Q07897	291 aa	Known RBP	2.33	□□□□□ -2.04
STH1	YIL126W	YLR125W	Q12138	136 aa		2.33	□□□□□ -2.04
STH1	YIL126W	GFA1	P14742	717 aa	Known RBP	2.33	□□□□□ -2.04
STH1	YIL126W	CHL1	P22516	861 aa	Predicted RBP	2.33	□□□□□ -2.04
STH1	YIL126W	OCA4	P25366	362 aa		2.33	□□□□□ -2.04
STH1	YIL126W	SPB1	P25582	841 aa	Predicted RBP	2.33	□□□□□ -2.04
STH1	YIL126W	MRE11	P32829	692 aa		2.33	□□□□□ -2.04
STH1	YIL126W	PTR2	P32901	601 aa		2.33	□□□□□ -2.04
STH1	YIL126W	TFC3	P34111	1160 aa		2.33	□□□□□ -2.04
STH1	YIL126W	BLI1	P35727	113 aa		2.33	□□□□□ -2.04
STH1	YIL126W	SPC42	P36094	363 aa		2.33	□□□□□ -2.04

Retrieved 100 of 5,963 RNA–protein pairs in 85.5 ms