RNA–Protein interactions for RNA: YHR027C

RPN1, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN1, Length 2,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN1YHR027C MEP1P40260 492 aa3.31□□□□□ -1.88
RPN1YHR027C QDR2P40474 542 aa3.31□□□□□ -1.88
RPN1YHR027C MNN11P46985 422 aaKnown RBP3.31□□□□□ -1.88
RPN1YHR027C RIM21P48565 533 aa3.31□□□□□ -1.88
RPN1YHR027C RAD17P48581 401 aa3.31□□□□□ -1.88
RPN1YHR027C IMD3P50095 523 aaKnown RBP3.31□□□□□ -1.88
RPN1YHR027C OCA1P50946 238 aaPredicted RBP3.31□□□□□ -1.88
RPN1YHR027C RBG2P53295 368 aaKnown RBP3.31□□□□□ -1.88
RPN1YHR027C RPN8Q08723 338 aaKnown RBP3.31□□□□□ -1.88
RPN1YHR027C YIL002W-AQ3E7Z5 69 aa3.31□□□□□ -1.88
RPN1YHR027C MST1P07236 462 aa3.3□□□□□ -1.88
RPN1YHR027C RPS19AP07280 144 aaKnown RBP3.3□□□□□ -1.88
RPN1YHR027C RPS19BP07281 144 aaPredicted RBP3.3□□□□□ -1.88
RPN1YHR027C ILS1P09436 1072 aaKnown RBP3.3□□□□□ -1.88
RPN1YHR027C STF2P16965 84 aa3.3□□□□□ -1.88
RPN1YHR027C SEC2P17065 759 aa3.3□□□□□ -1.88
RPN1YHR027C GCD7P32502 381 aaPredicted RBP3.3□□□□□ -1.88
RPN1YHR027C SUV3P32580 737 aa3.3□□□□□ -1.88
RPN1YHR027C PTR2P32901 601 aa3.3□□□□□ -1.88
RPN1YHR027C BCK2P33306 851 aa3.3□□□□□ -1.88
RPN1YHR027C YKT6P36015 200 aaKnown RBP3.3□□□□□ -1.88
RPN1YHR027C LAS1P36146 502 aaPredicted RBP3.3□□□□□ -1.88
RPN1YHR027C GIP1P38229 639 aa3.3□□□□□ -1.88
RPN1YHR027C NPT1P39683 429 aaKnown RBP3.3□□□□□ -1.88
RPN1YHR027C BOI2P39969 1040 aa3.3□□□□□ -1.88
RPN1YHR027C AVT6P40074 448 aa3.3□□□□□ -1.88
RPN1YHR027C YER186CP40101 306 aa3.3□□□□□ -1.88
RPN1YHR027C RIC1P40395 1056 aa3.3□□□□□ -1.88
RPN1YHR027C LYS14P40971 790 aa3.3□□□□□ -1.88
RPN1YHR027C TDA10P42938 290 aa3.3□□□□□ -1.88
RPN1YHR027C GNP1P48813 663 aa3.3□□□□□ -1.88
RPN1YHR027C GPI17Q04080 534 aa3.3□□□□□ -1.88
RPN1YHR027C HFD1Q04458 532 aa3.3□□□□□ -1.88
RPN1YHR027C SEC10Q06245 871 aa3.3□□□□□ -1.88
RPN1YHR027C RSC3Q06639 885 aa3.3□□□□□ -1.88
RPN1YHR027C ARP6Q12509 438 aa3.3□□□□□ -1.88
RPN1YHR027C APC1P53886 1748 aa3.3□□□□□ -1.88
RPN1YHR027C CMD1P06787 147 aaKnown RBP3.3□□□□□ -1.88
RPN1YHR027C URA1P28272 314 aaPredicted RBP3.3□□□□□ -1.88
RPN1YHR027C OXP1P28273 1286 aa3.3□□□□□ -1.88
RPN1YHR027C GYP6P32806 458 aa3.3□□□□□ -1.88
RPN1YHR027C XRS2P33301 854 aa3.3□□□□□ -1.88
RPN1YHR027C AST1P35183 429 aa3.3□□□□□ -1.88
RPN1YHR027C STP2P38704 541 aa3.3□□□□□ -1.88
RPN1YHR027C SWD1P39706 426 aa3.3□□□□□ -1.88
RPN1YHR027C TIF4631P39935 952 aaKnown RBP3.3□□□□□ -1.88
RPN1YHR027C ULP2P40537 1034 aaPredicted RBP3.3□□□□□ -1.88
RPN1YHR027C MDV1P47025 714 aa3.3□□□□□ -1.88
RPN1YHR027C SRB7P47822 140 aa3.3□□□□□ -1.88
RPN1YHR027C BRO1P48582 844 aa3.3□□□□□ -1.88
RPN1YHR027C ERG5P54781 538 aa3.3□□□□□ -1.88
RPN1YHR027C SLU7Q02775 382 aaKnown RBP3.3□□□□□ -1.88
RPN1YHR027C ENT2Q05785 613 aa3.3□□□□□ -1.88
RPN1YHR027C ARV1Q06541 321 aa3.3□□□□□ -1.88
RPN1YHR027C YLR031WQ07978 186 aa3.3□□□□□ -1.88
RPN1YHR027C REB1P21538 810 aa3.3□□□□□ -1.88
RPN1YHR027C CLB2P24869 491 aa3.3□□□□□ -1.88
RPN1YHR027C MCM4P30665 933 aaKnown RBP3.3□□□□□ -1.88
RPN1YHR027C MLS1P30952 554 aa3.3□□□□□ -1.88
RPN1YHR027C SMY1P32364 656 aaKnown RBP3.3□□□□□ -1.88
RPN1YHR027C GCG1P32656 232 aaKnown RBP3.3□□□□□ -1.88
RPN1YHR027C BLI1P35727 113 aa3.3□□□□□ -1.88
RPN1YHR027C MIA40P36046 403 aa3.3□□□□□ -1.88
RPN1YHR027C SHM1P37292 490 aaPredicted RBP3.3□□□□□ -1.88
RPN1YHR027C SDH8P38345 138 aa3.3□□□□□ -1.88
RPN1YHR027C YBR287WP38355 427 aa3.3□□□□□ -1.88
RPN1YHR027C SSF1P38789 453 aaPredicted RBP3.3□□□□□ -1.88
RPN1YHR027C MEF2P39677 819 aa3.3□□□□□ -1.88
RPN1YHR027C DLD3P39976 496 aaKnown RBP3.3□□□□□ -1.88
RPN1YHR027C XKS1P42826 600 aa3.3□□□□□ -1.88
RPN1YHR027C YFH7P43591 353 aa3.3□□□□□ -1.88
RPN1YHR027C NOP9P47077 666 aaKnown RBP3.3□□□□□ -1.88
RPN1YHR027C YJR039WP47107 1121 aa3.3□□□□□ -1.88
RPN1YHR027C UBP15P50101 1230 aa3.3□□□□□ -1.88
RPN1YHR027C COS6P53344 381 aa3.3□□□□□ -1.88
RPN1YHR027C BSC5P53755 489 aa3.3□□□□□ -1.88
RPN1YHR027C PGA2P53903 129 aa3.3□□□□□ -1.88
RPN1YHR027C YNL040WP53960 456 aaPredicted RBP3.3□□□□□ -1.88
RPN1YHR027C HER2Q03557 464 aa3.3□□□□□ -1.88
RPN1YHR027C FMP42Q04991 504 aa3.3□□□□□ -1.88
RPN1YHR027C RGC1Q06108 1083 aaKnown RBP3.3□□□□□ -1.88
RPN1YHR027C GPI13Q07830 1017 aa3.3□□□□□ -1.88
RPN1YHR027C TIP41Q12199 356 aa3.3□□□□□ -1.88
RPN1YHR027C MED4Q12343 284 aa3.3□□□□□ -1.88
RPN1YHR027C SSB1P11484 613 aaKnown RBP3.29□□□□□ -1.88
RPN1YHR027C TEC1P18412 486 aa3.29□□□□□ -1.88
RPN1YHR027C DAP2P18962 818 aa3.29□□□□□ -1.88
RPN1YHR027C PWP1P21304 576 aaKnown RBP3.29□□□□□ -1.88
RPN1YHR027C GSY1P23337 708 aa3.29□□□□□ -1.88
RPN1YHR027C TPS2P31688 896 aaKnown RBP3.29□□□□□ -1.88
RPN1YHR027C EUG1P32474 517 aa3.29□□□□□ -1.88
RPN1YHR027C SQT1P35184 431 aa3.29□□□□□ -1.88
RPN1YHR027C YHR218WP38899 603 aa3.29□□□□□ -1.88
RPN1YHR027C SSB2P40150 613 aaKnown RBP3.29□□□□□ -1.88
RPN1YHR027C PDS1P40316 373 aaPredicted RBP3.29□□□□□ -1.88
RPN1YHR027C SNZ3P43545 298 aa3.29□□□□□ -1.88
RPN1YHR027C SNZ2P53824 298 aa3.29□□□□□ -1.88
RPN1YHR027C TOF1P53840 1238 aa3.29□□□□□ -1.88
RPN1YHR027C MCM21Q06675 368 aa3.29□□□□□ -1.88
RPN1YHR027C BRX1Q08235 291 aaKnown RBP3.29□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 27.3 ms