RNA–Protein interactions for RNA: YGR184C

UBR1, Transcript of E3 ubiquitin ligase (N-recognin), yeastyeast

Gene UBR1, Length 5,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBR1YGR184C PGS1P25578 521 aa2.42□□□□□ -2.02
UBR1YGR184C URA1P28272 314 aaPredicted RBP2.42□□□□□ -2.02
UBR1YGR184C QNS1P38795 714 aaKnown RBP2.42□□□□□ -2.02
UBR1YGR184C VPS8P39702 1274 aa2.42□□□□□ -2.02
UBR1YGR184C PRM2P40534 656 aa2.42□□□□□ -2.02
UBR1YGR184C IMA1P53051 589 aa2.42□□□□□ -2.02
UBR1YGR184C ECM9Q02202 377 aa2.42□□□□□ -2.02
UBR1YGR184C HAS1Q03532 505 aaKnown RBP2.42□□□□□ -2.02
UBR1YGR184C NOP58Q12499 511 aaKnown RBP2.42□□□□□ -2.02
UBR1YGR184C LEU2P04173 364 aaPredicted RBP2.42□□□□□ -2.02
UBR1YGR184C RAD18P10862 487 aa2.42□□□□□ -2.02
UBR1YGR184C UGA3P26370 528 aa2.42□□□□□ -2.02
UBR1YGR184C YKR018CP36114 725 aa2.42□□□□□ -2.02
UBR1YGR184C SAP30P38429 201 aa2.42□□□□□ -2.02
UBR1YGR184C SRP72P38688 640 aaKnown RBP2.42□□□□□ -2.02
UBR1YGR184C CCT3P39077 534 aaKnown RBP2.42□□□□□ -2.02
UBR1YGR184C CPR6P53691 371 aaKnown RBP2.42□□□□□ -2.02
UBR1YGR184C YLR346CQ06139 101 aa2.42□□□□□ -2.02
UBR1YGR184C VPS5Q92331 675 aa2.42□□□□□ -2.02
UBR1YGR184C PFK1P16861 987 aaKnown RBP2.41□□□□□ -2.02
UBR1YGR184C UBC1P21734 215 aaKnown RBP2.41□□□□□ -2.02
UBR1YGR184C PRO1P32264 428 aa2.41□□□□□ -2.02
UBR1YGR184C SER1P33330 395 aaKnown RBP2.41□□□□□ -2.02
UBR1YGR184C PAN5P38787 379 aa2.41□□□□□ -2.02
UBR1YGR184C SET5P38890 526 aaKnown RBP2.41□□□□□ -2.02
UBR1YGR184C YJR039WP47107 1121 aa2.41□□□□□ -2.02
UBR1YGR184C ASK10P48361 1146 aa2.41□□□□□ -2.02
UBR1YGR184C UBA2P52488 636 aa2.41□□□□□ -2.02
UBR1YGR184C YLR287CQ05881 355 aa2.41□□□□□ -2.02
UBR1YGR184C ZRT2Q12436 422 aa2.41□□□□□ -2.02
UBR1YGR184C TOP3P13099 656 aa2.41□□□□□ -2.02
UBR1YGR184C KIP1P28742 1111 aa2.41□□□□□ -2.02
UBR1YGR184C YJR124CP47159 448 aa2.41□□□□□ -2.02
UBR1YGR184C CTF18P49956 741 aa2.41□□□□□ -2.02
UBR1YGR184C TEL2P53038 688 aa2.41□□□□□ -2.02
UBR1YGR184C CIK1Q01649 594 aa2.41□□□□□ -2.02
UBR1YGR184C MRPL13Q02204 264 aa2.41□□□□□ -2.02
UBR1YGR184C RSA3Q05942 220 aaKnown RBP2.41□□□□□ -2.02
UBR1YGR184C CRD1Q07560 283 aa2.41□□□□□ -2.02
UBR1YGR184C BRE4Q07660 1125 aa2.41□□□□□ -2.02
UBR1YGR184C VAS1P07806 1104 aaKnown RBP2.41□□□□□ -2.02
UBR1YGR184C TY1A-LR4P0C2I8 440 aaKnown RBP2.41□□□□□ -2.02
UBR1YGR184C TY1A-DR6P0CX70 440 aa2.41□□□□□ -2.02
UBR1YGR184C TY1A-ER1P0CX71 440 aa2.41□□□□□ -2.02
UBR1YGR184C TY1A-LR2P0CX72 440 aa2.41□□□□□ -2.02
UBR1YGR184C TY1A-PLP0CX73 440 aa2.41□□□□□ -2.02
UBR1YGR184C TY1A-JR1P0CX74 440 aa2.41□□□□□ -2.02
UBR1YGR184C TY1A-LR3P0CX75 440 aa2.41□□□□□ -2.02
UBR1YGR184C TY1A-ML2P0CX76 440 aa2.41□□□□□ -2.02
UBR1YGR184C CBF2P32504 956 aa2.41□□□□□ -2.02
UBR1YGR184C YKU70P32807 602 aa2.41□□□□□ -2.02
UBR1YGR184C REI1P38344 393 aaPredicted RBP2.41□□□□□ -2.02
UBR1YGR184C TSL1P38427 1098 aaKnown RBP2.41□□□□□ -2.02
UBR1YGR184C BEM4P39011 633 aa2.41□□□□□ -2.02
UBR1YGR184C JEM1P40358 645 aa2.41□□□□□ -2.02
UBR1YGR184C ARC1P46672 376 aaKnown RBP2.41□□□□□ -2.02
UBR1YGR184C YJR098CP47139 656 aa2.41□□□□□ -2.02
UBR1YGR184C TY1A-GR1Q12085 440 aa2.41□□□□□ -2.02
UBR1YGR184C TY1A-PR3Q6Q5H1 440 aaKnown RBP2.41□□□□□ -2.02
UBR1YGR184C TY1A-OLQ92392 440 aaKnown RBP2.41□□□□□ -2.02
UBR1YGR184C CDC19P00549 500 aaKnown RBP2.41□□□□□ -2.02
UBR1YGR184C GLY1P37303 387 aaKnown RBP2.41□□□□□ -2.02
UBR1YGR184C UME6P39001 836 aa2.41□□□□□ -2.02
UBR1YGR184C HST3P53687 447 aa2.41□□□□□ -2.02
UBR1YGR184C GPD1Q00055 391 aaKnown RBP2.41□□□□□ -2.02
UBR1YGR184C UBP2Q01476 1272 aa2.41□□□□□ -2.02
UBR1YGR184C SGS1P35187 1447 aa2.41□□□□□ -2.02
UBR1YGR184C PHR1P05066 565 aaKnown RBP RIP-Chip data2.4□□□□□ -2.02not detected
UBR1YGR184C SAC7P17121 654 aa2.4□□□□□ -2.02
UBR1YGR184C SLC1P33333 303 aa2.4□□□□□ -2.02
UBR1YGR184C CAB3P36076 571 aa2.4□□□□□ -2.02
UBR1YGR184C CCZ1P38273 704 aa2.4□□□□□ -2.02
UBR1YGR184C RLP7P40693 322 aaKnown RBP2.4□□□□□ -2.02
UBR1YGR184C ALY2P47029 1046 aa2.4□□□□□ -2.02
UBR1YGR184C NOP56Q12460 504 aaKnown RBP RIP-Chip data2.4□□□□□ -2.02not detected
UBR1YGR184C DIF1O13577 133 aa2.4□□□□□ -2.02
UBR1YGR184C FUM1P08417 488 aaKnown RBP2.4□□□□□ -2.02
UBR1YGR184C VMA2P16140 517 aaKnown RBP2.4□□□□□ -2.02
UBR1YGR184C PDX1P16451 410 aa2.4□□□□□ -2.02
UBR1YGR184C MLS1P30952 554 aa2.4□□□□□ -2.02
UBR1YGR184C RAD16P31244 790 aa2.4□□□□□ -2.02
UBR1YGR184C ATG19P35193 415 aa2.4□□□□□ -2.02
UBR1YGR184C FSH1P38777 243 aaKnown RBP2.4□□□□□ -2.02
UBR1YGR184C LRP1P38801 184 aaKnown RBP2.4□□□□□ -2.02
UBR1YGR184C STL1P39932 569 aa2.4□□□□□ -2.02
UBR1YGR184C SPO74P45819 413 aa2.4□□□□□ -2.02
UBR1YGR184C MEP3P53390 489 aa2.4□□□□□ -2.02
UBR1YGR184C YNR065CP53751 1116 aa2.4□□□□□ -2.02
UBR1YGR184C GCN4P03069 281 aa2.4□□□□□ -2.03
UBR1YGR184C RPL11AP0C0W9 174 aaKnown RBP2.4□□□□□ -2.03
UBR1YGR184C TGL1P34163 548 aa2.4□□□□□ -2.03
UBR1YGR184C ECM1P39715 212 aa2.4□□□□□ -2.03
UBR1YGR184C MTD1Q02046 320 aaKnown RBP2.4□□□□□ -2.03
UBR1YGR184C RCO1Q04779 684 aa2.4□□□□□ -2.03
UBR1YGR184C RPL11BQ3E757 174 aaPredicted RBP2.4□□□□□ -2.03
UBR1YGR184C GFA1P14742 717 aaKnown RBP2.4□□□□□ -2.03
UBR1YGR184C TFA2P36145 328 aa2.4□□□□□ -2.03
UBR1YGR184C SLS1P42900 643 aa2.4□□□□□ -2.03
UBR1YGR184C YHM2Q04013 314 aa2.4□□□□□ -2.03
UBR1YGR184C YPR071WQ12346 211 aa2.4□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 126.7 ms