RNA–Protein interactions for RNA: YGR109W-B

YGR109W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YGR109W-B, Length 4,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YGR109W-BYGR109W-B CDC25P04821 1589 aa1.97□□□□□ -2.09
YGR109W-BYGR109W-B CDC43P18898 376 aa1.97□□□□□ -2.09
YGR109W-BYGR109W-B CTF13P35203 478 aa1.97□□□□□ -2.09
YGR109W-BYGR109W-B SUL1P38359 859 aa1.97□□□□□ -2.09
YGR109W-BYGR109W-B GGA2P38817 585 aaKnown RBP1.97□□□□□ -2.09
YGR109W-BYGR109W-B YCF1P39109 1515 aaKnown RBP1.97□□□□□ -2.09
YGR109W-BYGR109W-B RIA1P53893 1110 aa1.97□□□□□ -2.09
YGR109W-BYGR109W-B PEX19Q07418 342 aa1.97□□□□□ -2.09
YGR109W-BYGR109W-B IRC10Q08118 586 aa1.97□□□□□ -2.09
YGR109W-BYGR109W-B ECM1P39715 212 aa1.97□□□□□ -2.09
YGR109W-BYGR109W-B YAP1802P53309 568 aa1.97□□□□□ -2.09
YGR109W-BYGR109W-B WRS1Q12109 432 aaKnown RBP1.97□□□□□ -2.09
YGR109W-BYGR109W-B CLF1Q12309 687 aaPredicted RBP1.97□□□□□ -2.09
YGR109W-BYGR109W-B OSH2Q12451 1283 aa1.97□□□□□ -2.09
YGR109W-BYGR109W-B TY1B-JR2P47100 1755 aaKnown RBP1.96□□□□□ -2.09
YGR109W-BYGR109W-B TY1B-ER2Q03619 1755 aa1.96□□□□□ -2.09
YGR109W-BYGR109W-B TY1B-MR1Q04214 1755 aa1.96□□□□□ -2.09
YGR109W-BYGR109W-B TY1B-MR2Q04670 1755 aaKnown RBP1.96□□□□□ -2.09
YGR109W-BYGR109W-B TY1B-LR1Q12088 1755 aaKnown RBP1.96□□□□□ -2.09
YGR109W-BYGR109W-B TY1B-NL1Q12112 1755 aa1.96□□□□□ -2.09
YGR109W-BYGR109W-B TY1B-GR1Q12141 1755 aa1.96□□□□□ -2.09
YGR109W-BYGR109W-B TY1B-BLQ12490 1755 aa1.96□□□□□ -2.09
YGR109W-BYGR109W-B BRN1P38170 754 aa1.96□□□□□ -2.1
YGR109W-BYGR109W-B MBP1P39678 833 aa1.96□□□□□ -2.1
YGR109W-BYGR109W-B NNF1P47149 201 aa1.96□□□□□ -2.1
YGR109W-BYGR109W-B YKR011CQ02209 353 aa1.96□□□□□ -2.1
YGR109W-BYGR109W-B YOR093CQ12275 1648 aa1.96□□□□□ -2.1
YGR109W-BYGR109W-B GFA1P14742 717 aaKnown RBP1.96□□□□□ -2.1
YGR109W-BYGR109W-B TIF5P38431 405 aaKnown RBP1.96□□□□□ -2.1
YGR109W-BYGR109W-B ADY4Q05955 493 aa1.96□□□□□ -2.1
YGR109W-BYGR109W-B PLP2Q12017 286 aa1.96□□□□□ -2.1
YGR109W-BYGR109W-B SIN3P22579 1536 aa1.96□□□□□ -2.1
YGR109W-BYGR109W-B CAF20P12962 161 aaKnown RBP1.96□□□□□ -2.1
YGR109W-BYGR109W-B URA1P28272 314 aaPredicted RBP1.96□□□□□ -2.1
YGR109W-BYGR109W-B RTS3P53289 263 aa1.96□□□□□ -2.1
YGR109W-BYGR109W-B YHR078WP38799 552 aa1.95□□□□□ -2.1
YGR109W-BYGR109W-B ELO3P40319 345 aa1.95□□□□□ -2.1
YGR109W-BYGR109W-B BFA1P47113 574 aa1.95□□□□□ -2.1
YGR109W-BYGR109W-B ALG7P07286 448 aa1.95□□□□□ -2.1
YGR109W-BYGR109W-B HCA4P20448 770 aaKnown RBP1.95□□□□□ -2.1
YGR109W-BYGR109W-B SWE1P32944 819 aa1.95□□□□□ -2.1
YGR109W-BYGR109W-B EMC3P36039 253 aa1.95□□□□□ -2.1
YGR109W-BYGR109W-B SLI1P53304 468 aa1.95□□□□□ -2.1
YGR109W-BYGR109W-B JIP5Q06214 492 aaPredicted RBP1.95□□□□□ -2.1
YGR109W-BYGR109W-B FMP25Q08023 583 aa1.95□□□□□ -2.1
YGR109W-BYGR109W-B SPT6P23615 1451 aaKnown RBP1.95□□□□□ -2.1
YGR109W-BYGR109W-B DMC1P25453 334 aa1.95□□□□□ -2.1
YGR109W-BYGR109W-B SPC42P36094 363 aa1.95□□□□□ -2.1
YGR109W-BYGR109W-B YIR042CP40586 236 aa1.95□□□□□ -2.1
YGR109W-BYGR109W-B PKH1Q03407 766 aa1.95□□□□□ -2.1
YGR109W-BYGR109W-B YDL124WQ07551 312 aaKnown RBP1.95□□□□□ -2.1
YGR109W-BYGR109W-B YLR040CQ07988 224 aa1.95□□□□□ -2.1
YGR109W-BYGR109W-B PET10P36139 283 aa1.95□□□□□ -2.1
YGR109W-BYGR109W-B YIL108WP40483 696 aaKnown RBP1.95□□□□□ -2.1
YGR109W-BYGR109W-B ATG36P46983 293 aa1.95□□□□□ -2.1
YGR109W-BYGR109W-B TIM50Q02776 476 aa1.95□□□□□ -2.1
YGR109W-BYGR109W-B HSP60P19882 572 aaKnown RBP1.94□□□□□ -2.1
YGR109W-BYGR109W-B TFC3P34111 1160 aa1.94□□□□□ -2.1
YGR109W-BYGR109W-B PZF1P39933 429 aa1.94□□□□□ -2.1
YGR109W-BYGR109W-B HSV2P50079 448 aaPredicted RBP1.94□□□□□ -2.1
YGR109W-BYGR109W-B ZDS1P50111 915 aaKnown RBP1.94□□□□□ -2.1
YGR109W-BYGR109W-B ASI2P53895 289 aa1.94□□□□□ -2.1
YGR109W-BYGR109W-B SUI2P20459 304 aaKnown RBP1.94□□□□□ -2.1
YGR109W-BYGR109W-B SEC21P32074 935 aaKnown RBP1.94□□□□□ -2.1
YGR109W-BYGR109W-B HUL4P40985 892 aa1.94□□□□□ -2.1
YGR109W-BYGR109W-B BUL1P48524 976 aa1.94□□□□□ -2.1
YGR109W-BYGR109W-B ERG5P54781 538 aa1.94□□□□□ -2.1
YGR109W-BYGR109W-B NPL3Q01560 414 aaKnown RBP RIP-Chip data1.94□□□□□ -2.1not detected
YGR109W-BYGR109W-B BUL2Q03758 920 aaKnown RBP1.94□□□□□ -2.1
YGR109W-BYGR109W-B RNA1P11745 407 aaKnown RBP1.94□□□□□ -2.1
YGR109W-BYGR109W-B MFT1P33441 392 aaKnown RBP1.94□□□□□ -2.1
YGR109W-BYGR109W-B YBR259WP38338 688 aa1.94□□□□□ -2.1
YGR109W-BYGR109W-B NPP2P39997 493 aa1.94□□□□□ -2.1
YGR109W-BYGR109W-B NRG1Q03125 231 aa1.94□□□□□ -2.1
YGR109W-BYGR109W-B TMN2Q04562 672 aa1.94□□□□□ -2.1
YGR109W-BYGR109W-B HBS1P32769 611 aaKnown RBP1.94□□□□□ -2.1
YGR109W-BYGR109W-B APT2P36973 181 aa1.94□□□□□ -2.1
YGR109W-BYGR109W-B TOK1P40310 691 aa1.94□□□□□ -2.1
YGR109W-BYGR109W-B ATF1P40353 525 aa1.94□□□□□ -2.1
YGR109W-BYGR109W-B RSC3Q06639 885 aa1.94□□□□□ -2.1
YGR109W-BYGR109W-B NDJ1Q12366 352 aa1.94□□□□□ -2.1
YGR109W-BYGR109W-B SIC1P38634 284 aa1.93□□□□□ -2.1
YGR109W-BYGR109W-B IES1P43579 692 aa1.93□□□□□ -2.1
YGR109W-BYGR109W-B FRE5Q08908 694 aa1.93□□□□□ -2.1
YGR109W-BYGR109W-B DNF2Q12675 1612 aa1.93□□□□□ -2.1
YGR109W-BYGR109W-B RKR1Q04781 1562 aa1.93□□□□□ -2.1
YGR109W-BYGR109W-B YLR415CO13578 112 aa1.93□□□□□ -2.1
YGR109W-BYGR109W-B GAL11P19659 1081 aa1.93□□□□□ -2.1
YGR109W-BYGR109W-B PTH2P34222 208 aa1.93□□□□□ -2.1
YGR109W-BYGR109W-B CUE2P36075 443 aaKnown RBP1.93□□□□□ -2.1
YGR109W-BYGR109W-B ALR2P43553 858 aa1.93□□□□□ -2.1
YGR109W-BYGR109W-B YOL098CQ12496 1037 aa1.93□□□□□ -2.1
YGR109W-BYGR109W-B LAT1P12695 482 aaKnown RBP1.93□□□□□ -2.1
YGR109W-BYGR109W-B CYS3P31373 394 aaKnown RBP1.93□□□□□ -2.1
YGR109W-BYGR109W-B VAC8P39968 578 aa1.93□□□□□ -2.1
YGR109W-BYGR109W-B PRP3Q03338 469 aaPredicted RBP1.93□□□□□ -2.1
YGR109W-BYGR109W-B YDR514CQ04408 483 aa1.93□□□□□ -2.1
YGR109W-BYGR109W-B ENV7Q12003 364 aa1.93□□□□□ -2.1
YGR109W-BYGR109W-B RPO31P04051 1460 aa1.93□□□□□ -2.1
YGR109W-BYGR109W-B DUS1P53759 423 aaKnown RBP1.92□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 28.6 ms