RNA–Protein interactions for RNA: YGL173C

XRN1, Transcript of Evolutionarily-conserved 5'-3' exonuclease, yeastyeast

Gene XRN1, Length 4,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
XRN1YGL173C ZIP2P53061 704 aa3.55□□□□□ -1.84
XRN1YGL173C YNL034WP53963 612 aa3.55□□□□□ -1.84
XRN1YGL173C YNL018CP53976 612 aa3.55□□□□□ -1.84
XRN1YGL173C HED1Q03937 162 aa3.55□□□□□ -1.84
XRN1YGL173C YLR352WQ06479 807 aa3.55□□□□□ -1.84
XRN1YGL173C YPL066WQ12194 479 aa3.55□□□□□ -1.84
XRN1YGL173C RMP1Q12530 201 aa3.55□□□□□ -1.84
XRN1YGL173C OLE1P21147 510 aaKnown RBP3.55□□□□□ -1.84
XRN1YGL173C AFG2P32794 780 aa3.55□□□□□ -1.84
XRN1YGL173C MKS1P34072 584 aa3.55□□□□□ -1.84
XRN1YGL173C PIM1P36775 1133 aa3.55□□□□□ -1.84
XRN1YGL173C GDT1P38301 280 aaPredicted RBP3.55□□□□□ -1.84
XRN1YGL173C SEC27P41811 889 aaKnown RBP3.55□□□□□ -1.84
XRN1YGL173C VNX1P42839 908 aa3.55□□□□□ -1.84
XRN1YGL173C BNA2P47125 453 aa3.55□□□□□ -1.84
XRN1YGL173C UBP15P50101 1230 aa3.55□□□□□ -1.84
XRN1YGL173C MET13P53128 600 aa3.55□□□□□ -1.84
XRN1YGL173C NPY1P53164 384 aa3.55□□□□□ -1.84
XRN1YGL173C CPR6P53691 371 aaKnown RBP3.55□□□□□ -1.84
XRN1YGL173C PEX29Q03370 554 aa3.55□□□□□ -1.84
XRN1YGL173C NMD4Q12129 218 aa3.55□□□□□ -1.84
XRN1YGL173C OPI1P21957 404 aa3.55□□□□□ -1.84
XRN1YGL173C MOT2P34909 587 aaKnown RBP3.55□□□□□ -1.84
XRN1YGL173C MCD4P36051 919 aa3.55□□□□□ -1.84
XRN1YGL173C DLD3P39976 496 aaKnown RBP3.55□□□□□ -1.84
XRN1YGL173C BUD27P43573 796 aaKnown RBP RIP-Chip data3.55□□□□□ -1.84not detected
XRN1YGL173C SIP4P46954 829 aa3.55□□□□□ -1.84
XRN1YGL173C SPT16P32558 1035 aaKnown RBP3.54□□□□□ -1.84
XRN1YGL173C PAH1P32567 862 aa3.54□□□□□ -1.84
XRN1YGL173C EXO84P38261 753 aa3.54□□□□□ -1.84
XRN1YGL173C XKS1P42826 600 aa3.54□□□□□ -1.84
XRN1YGL173C QRI7P43122 407 aa3.54□□□□□ -1.84
XRN1YGL173C SND1Q04007 877 aa3.54□□□□□ -1.84
XRN1YGL173C ENT2Q05785 613 aa3.54□□□□□ -1.84
XRN1YGL173C ACM1Q08981 209 aa3.54□□□□□ -1.84
XRN1YGL173C FAP7Q12055 197 aaPredicted RBP3.54□□□□□ -1.84
XRN1YGL173C SRF1Q12516 437 aa3.54□□□□□ -1.84
XRN1YGL173C SNT1P25357 1226 aa3.54□□□□□ -1.84
XRN1YGL173C FUN30P31380 1131 aa3.54□□□□□ -1.84
XRN1YGL173C FRD1P32614 470 aaKnown RBP3.54□□□□□ -1.84
XRN1YGL173C SWH1P35845 1188 aa3.54□□□□□ -1.84
XRN1YGL173C HXT6P39003 570 aaKnown RBP3.54□□□□□ -1.84
XRN1YGL173C HXT7P39004 570 aa3.54□□□□□ -1.84
XRN1YGL173C RCO1Q04779 684 aa3.54□□□□□ -1.84
XRN1YGL173C ILS1P09436 1072 aaKnown RBP3.54□□□□□ -1.84
XRN1YGL173C UBC1P21734 215 aaKnown RBP3.54□□□□□ -1.84
XRN1YGL173C MSH3P25336 1018 aa3.54□□□□□ -1.84
XRN1YGL173C SHM2P37291 469 aaKnown RBP3.54□□□□□ -1.84
XRN1YGL173C PHM8P40025 321 aa3.54□□□□□ -1.84
XRN1YGL173C CAF120P53836 1060 aa3.54□□□□□ -1.84
XRN1YGL173C PML39Q03760 334 aa3.54□□□□□ -1.84
XRN1YGL173C YDR131CQ03899 556 aa3.54□□□□□ -1.84
XRN1YGL173C UTP5Q04177 643 aaKnown RBP3.54□□□□□ -1.84
XRN1YGL173C GRC3Q07845 632 aa3.54□□□□□ -1.84
XRN1YGL173C PSK2Q08217 1101 aa3.54□□□□□ -1.84
XRN1YGL173C ETT1Q08421 412 aaKnown RBP3.54□□□□□ -1.84
XRN1YGL173C RAV1P47104 1357 aa3.54□□□□□ -1.84
XRN1YGL173C GFA1P14742 717 aaKnown RBP3.54□□□□□ -1.84
XRN1YGL173C CHS3P29465 1165 aa3.54□□□□□ -1.84
XRN1YGL173C MCM10P32354 571 aa3.54□□□□□ -1.84
XRN1YGL173C MF(ALPHA)2P32435 120 aa3.54□□□□□ -1.84
XRN1YGL173C BCK2P33306 851 aa3.54□□□□□ -1.84
XRN1YGL173C PET100P38958 111 aa3.54□□□□□ -1.84
XRN1YGL173C BEM4P39011 633 aa3.54□□□□□ -1.84
XRN1YGL173C LSM5P40089 93 aaKnown RBP3.54□□□□□ -1.84
XRN1YGL173C SET4P42948 560 aa3.54□□□□□ -1.84
XRN1YGL173C SDA1P53313 767 aaKnown RBP3.54□□□□□ -1.84
XRN1YGL173C ECM9Q02202 377 aa3.54□□□□□ -1.84
XRN1YGL173C NOP56Q12460 504 aaKnown RBP RIP-Chip data3.54□□□□□ -1.84not detected
XRN1YGL173C REC107P21651 314 aa3.53□□□□□ -1.84
XRN1YGL173C SWI3P32591 825 aa3.53□□□□□ -1.84
XRN1YGL173C SLA2P33338 968 aa3.53□□□□□ -1.84
XRN1YGL173C CTF13P35203 478 aa3.53□□□□□ -1.84
XRN1YGL173C OAF3P36023 863 aa3.53□□□□□ -1.84
XRN1YGL173C YKR018CP36114 725 aa3.53□□□□□ -1.84
XRN1YGL173C SPT8P38915 602 aa3.53□□□□□ -1.84
XRN1YGL173C YTA6P40328 754 aa3.53□□□□□ -1.84
XRN1YGL173C IRC5P43610 853 aa3.53□□□□□ -1.84
XRN1YGL173C CCT8P47079 568 aaKnown RBP3.53□□□□□ -1.84
XRN1YGL173C SUT1P53032 299 aaKnown RBP3.53□□□□□ -1.84
XRN1YGL173C TAN1P53072 289 aaPredicted RBP3.53□□□□□ -1.84
XRN1YGL173C NYV1Q12255 253 aa3.53□□□□□ -1.84
XRN1YGL173C ADE8P04161 214 aa3.53□□□□□ -1.84
XRN1YGL173C FUM1P08417 488 aaKnown RBP3.53□□□□□ -1.84
XRN1YGL173C PDX1P16451 410 aa3.53□□□□□ -1.84
XRN1YGL173C ARE1P25628 610 aa3.53□□□□□ -1.84
XRN1YGL173C DBF20P32328 564 aa3.53□□□□□ -1.84
XRN1YGL173C YKL077WP36081 392 aa3.53□□□□□ -1.84
XRN1YGL173C AXL1P40851 1208 aa3.53□□□□□ -1.84
XRN1YGL173C HOL1P53389 586 aa3.53□□□□□ -1.84
XRN1YGL173C HMO1Q03973 246 aaKnown RBP3.53□□□□□ -1.84
XRN1YGL173C CRD1Q07560 283 aa3.53□□□□□ -1.84
XRN1YGL173C ENV7Q12003 364 aa3.53□□□□□ -1.84
XRN1YGL173C RPA135P22138 1203 aaKnown RBP3.53□□□□□ -1.84
XRN1YGL173C TFC3P34111 1160 aa3.53□□□□□ -1.84
XRN1YGL173C SDS22P36047 338 aa3.53□□□□□ -1.84
XRN1YGL173C PSY4P38193 441 aa3.53□□□□□ -1.84
XRN1YGL173C SSZ1P38788 538 aaKnown RBP3.53□□□□□ -1.84
XRN1YGL173C NIT1P40447 199 aa3.53□□□□□ -1.84
XRN1YGL173C FYV8P46949 817 aaKnown RBP3.53□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 97.7 ms