RNA–Protein interactions for RNA: YEL051W

VMA8, Transcript of Subunit D of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA8, Length 771 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA8	YEL051W	FPR4	Q06205	392 aa	Predicted RBP	4.16	□□□□□ -1.74
VMA8	YEL051W	TAD3	Q9URQ3	322 aa		4.16	□□□□□ -1.74
VMA8	YEL051W	PRC1	P00729	532 aa		4.15	□□□□□ -1.75
VMA8	YEL051W	PPR1	P07272	904 aa	Predicted RBP	4.15	□□□□□ -1.75
VMA8	YEL051W	GAL11	P19659	1081 aa		4.15	□□□□□ -1.75
VMA8	YEL051W	SAP190	P36123	1033 aa		4.15	□□□□□ -1.75
VMA8	YEL051W	PZF1	P39933	429 aa		4.15	□□□□□ -1.75
VMA8	YEL051W	FKH2	P41813	862 aa		4.15	□□□□□ -1.75
VMA8	YEL051W	SSY5	P47002	699 aa		4.15	□□□□□ -1.75
VMA8	YEL051W	REH1	Q06709	432 aa		4.15	□□□□□ -1.75
VMA8	YEL051W	MET3	P08536	511 aa		4.14	□□□□□ -1.75
VMA8	YEL051W	PPG1	P32838	368 aa		4.14	□□□□□ -1.75
VMA8	YEL051W	SAK1	P38990	1142 aa		4.14	□□□□□ -1.75
VMA8	YEL051W	MRPS35	P53292	345 aa		4.14	□□□□□ -1.75
VMA8	YEL051W	RNH70	P53331	553 aa		4.14	□□□□□ -1.75
VMA8	YEL051W	ATP25	Q03153	612 aa		4.14	□□□□□ -1.75
VMA8	YEL051W	PKH1	Q03407	766 aa		4.14	□□□□□ -1.75
VMA8	YEL051W	YMR206W	Q03695	313 aa		4.14	□□□□□ -1.75
VMA8	YEL051W	MUS81	Q04149	632 aa	Predicted RBP	4.14	□□□□□ -1.75
VMA8	YEL051W	IOC4	Q04213	475 aa		4.14	□□□□□ -1.75
VMA8	YEL051W	DLT1	Q04216	342 aa		4.14	□□□□□ -1.75
VMA8	YEL051W	MET7	Q08645	548 aa		4.14	□□□□□ -1.75
VMA8	YEL051W	CIT2	P08679	460 aa		4.13	□□□□□ -1.75
VMA8	YEL051W	CAF20	P12962	161 aa	Known RBP	4.13	□□□□□ -1.75
VMA8	YEL051W	NGG1	P32494	702 aa		4.13	□□□□□ -1.75
VMA8	YEL051W	SPC29	P33419	253 aa		4.13	□□□□□ -1.75
VMA8	YEL051W	SET5	P38890	526 aa	Known RBP	4.13	□□□□□ -1.75
VMA8	YEL051W	ELO3	P40319	345 aa		4.13	□□□□□ -1.75
VMA8	YEL051W	OSW7	P43611	510 aa		4.13	□□□□□ -1.75
VMA8	YEL051W	TY4A-J	P47023	414 aa		4.13	□□□□□ -1.75
VMA8	YEL051W	STB4	P50104	949 aa		4.13	□□□□□ -1.75
VMA8	YEL051W	RSC3	Q06639	885 aa		4.13	□□□□□ -1.75
VMA8	YEL051W	FRE5	Q08908	694 aa		4.13	□□□□□ -1.75
VMA8	YEL051W	THI21	Q08975	551 aa		4.13	□□□□□ -1.75
VMA8	YEL051W	ACF2	Q12168	779 aa		4.13	□□□□□ -1.75
VMA8	YEL051W	YBR182C-A	Q8TGU6	64 aa		4.13	□□□□□ -1.75
VMA8	YEL051W	YLR415C	O13578	112 aa		4.12	□□□□□ -1.75
VMA8	YEL051W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
VMA8	YEL051W	CHZ1	P40019	153 aa	Predicted RBP	4.12	□□□□□ -1.75
VMA8	YEL051W	ZDS1	P50111	915 aa	Known RBP	4.12	□□□□□ -1.75
VMA8	YEL051W	MUP1	P50276	574 aa		4.12	□□□□□ -1.75
VMA8	YEL051W	UBA2	P52488	636 aa		4.12	□□□□□ -1.75
VMA8	YEL051W	RPN4	Q03465	531 aa		4.12	□□□□□ -1.75
VMA8	YEL051W	OMS1	Q06668	471 aa		4.12	□□□□□ -1.75
VMA8	YEL051W	GDH3	P39708	457 aa		4.11	□□□□□ -1.75
VMA8	YEL051W	RLP7	P40693	322 aa	Known RBP	4.11	□□□□□ -1.75
VMA8	YEL051W	SHR5	P41912	237 aa		4.11	□□□□□ -1.75
VMA8	YEL051W	PFA3	P42836	336 aa		4.11	□□□□□ -1.75
VMA8	YEL051W	HXT16	P47185	567 aa		4.11	□□□□□ -1.75
VMA8	YEL051W	MUK1	Q02866	612 aa		4.11	□□□□□ -1.75
VMA8	YEL051W	MCH5	Q08777	521 aa		4.11	□□□□□ -1.75
VMA8	YEL051W	PER1	P25625	357 aa		4.1	□□□□□ -1.75
VMA8	YEL051W	PPS1	P38148	807 aa		4.1	□□□□□ -1.75
VMA8	YEL051W	BRN1	P38170	754 aa		4.1	□□□□□ -1.75
VMA8	YEL051W	AMA1	P50082	593 aa		4.1	□□□□□ -1.75
VMA8	YEL051W	ZIP2	P53061	704 aa		4.1	□□□□□ -1.75
VMA8	YEL051W	TIM44	Q01852	431 aa		4.1	□□□□□ -1.75
VMA8	YEL051W	NRG1	Q03125	231 aa		4.1	□□□□□ -1.75
VMA8	YEL051W	TMN2	Q04562	672 aa		4.1	□□□□□ -1.75
VMA8	YEL051W	ADY4	Q05955	493 aa		4.1	□□□□□ -1.75
VMA8	YEL051W	DIF1	O13577	133 aa		4.09	□□□□□ -1.75
VMA8	YEL051W	ERR1	P0CX10	437 aa		4.09	□□□□□ -1.75
VMA8	YEL051W	ERR2	P0CX11	437 aa		4.09	□□□□□ -1.75
VMA8	YEL051W	YBR053C	P38235	358 aa		4.09	□□□□□ -1.75
VMA8	YEL051W	NMD2	P38798	1089 aa	Known RBP	4.09	□□□□□ -1.75
VMA8	YEL051W	MTR3	P48240	250 aa	Predicted RBP	4.09	□□□□□ -1.75
VMA8	YEL051W	HSV2	P50079	448 aa	Predicted RBP	4.09	□□□□□ -1.75
VMA8	YEL051W	NUP82	P40368	713 aa		4.08	□□□□□ -1.76
VMA8	YEL051W	YIR042C	P40586	236 aa		4.08	□□□□□ -1.76
VMA8	YEL051W	BUD6	P41697	788 aa		4.08	□□□□□ -1.76
VMA8	YEL051W	ALY2	P47029	1046 aa		4.08	□□□□□ -1.76
VMA8	YEL051W	ASM4	Q05166	528 aa		4.08	□□□□□ -1.76
VMA8	YEL051W	TGL5	Q12043	749 aa		4.08	□□□□□ -1.76
VMA8	YEL051W	GPR1	Q12361	961 aa		4.08	□□□□□ -1.76
VMA8	YEL051W	TIM23	P32897	222 aa		4.07	□□□□□ -1.76
VMA8	YEL051W	YJL163C	P46996	555 aa		4.07	□□□□□ -1.76
VMA8	YEL051W	MAL11	P53048	616 aa		4.07	□□□□□ -1.76
VMA8	YEL051W	CRR1	Q05790	422 aa		4.07	□□□□□ -1.76
VMA8	YEL051W	MET6	P05694	767 aa	Known RBP	4.06	□□□□□ -1.76
VMA8	YEL051W	MTC2	P34246	357 aa		4.06	□□□□□ -1.76
VMA8	YEL051W	YPT53	P36019	220 aa		4.06	□□□□□ -1.76
VMA8	YEL051W	YBR259W	P38338	688 aa		4.06	□□□□□ -1.76
VMA8	YEL051W	SIC1	P38634	284 aa		4.06	□□□□□ -1.76
VMA8	YEL051W	YHL017W	P38745	532 aa		4.06	□□□□□ -1.76
VMA8	YEL051W	DAS1	P47005	663 aa		4.06	□□□□□ -1.76
VMA8	YEL051W	ALG12	P53730	551 aa		4.06	□□□□□ -1.76
VMA8	YEL051W	HBT1	Q07653	1046 aa	Known RBP	4.06	□□□□□ -1.76
VMA8	YEL051W	IRC10	Q08118	586 aa		4.06	□□□□□ -1.76
VMA8	YEL051W	PHO8	P11491	566 aa		4.05	□□□□□ -1.76
VMA8	YEL051W	LAT1	P12695	482 aa	Known RBP	4.05	□□□□□ -1.76
VMA8	YEL051W	MTH1	P35198	433 aa		4.05	□□□□□ -1.76
VMA8	YEL051W	QRI1	P43123	477 aa	Known RBP	4.05	□□□□□ -1.76
VMA8	YEL051W	STU2	P46675	888 aa		4.05	□□□□□ -1.76
VMA8	YEL051W	GND2	P53319	492 aa		4.05	□□□□□ -1.76
VMA8	YEL051W	YDR338C	Q05497	695 aa		4.05	□□□□□ -1.76
VMA8	YEL051W	IRC13	Q08630	104 aa		4.05	□□□□□ -1.76
VMA8	YEL051W	MDM12	Q92328	271 aa		4.05	□□□□□ -1.76
VMA8	YEL051W	THI4	P32318	326 aa		4.04	□□□□□ -1.76
VMA8	YEL051W	MCD4	P36051	919 aa		4.04	□□□□□ -1.76
VMA8	YEL051W	SPC42	P36094	363 aa		4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 22.1 ms