RNA–Protein interactions for RNA: YDR425W

SNX41, Transcript of Sorting nexin, yeastyeast

Gene SNX41, Length 1,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNX41YDR425W YDR514CQ04408 483 aa3.28□□□□□ -1.88
SNX41YDR425W MET7Q08645 548 aa3.28□□□□□ -1.88
SNX41YDR425W YOR022CQ12204 715 aa3.28□□□□□ -1.88
SNX41YDR425W GPR1Q12361 961 aa3.28□□□□□ -1.88
SNX41YDR425W ERR1P0CX10 437 aa3.27□□□□□ -1.89
SNX41YDR425W ERR2P0CX11 437 aa3.27□□□□□ -1.89
SNX41YDR425W SET5P38890 526 aaKnown RBP3.27□□□□□ -1.89
SNX41YDR425W PHR1P05066 565 aaKnown RBP RIP-Chip data3.26□□□□□ -1.89not detected
SNX41YDR425W TIM23P32897 222 aa3.26□□□□□ -1.89
SNX41YDR425W YKL091CP33324 310 aaKnown RBP3.26□□□□□ -1.89
SNX41YDR425W MTC2P34246 357 aa3.26□□□□□ -1.89
SNX41YDR425W VHR1P40522 640 aa3.26□□□□□ -1.89
SNX41YDR425W MUS81Q04149 632 aaPredicted RBP3.26□□□□□ -1.89
SNX41YDR425W YOL073CQ08232 322 aa3.26□□□□□ -1.89
SNX41YDR425W TRM13Q12383 476 aa3.26□□□□□ -1.89
SNX41YDR425W MDM12Q92328 271 aa3.26□□□□□ -1.89
SNX41YDR425W PRC1P00729 532 aa3.26□□□□□ -1.89
SNX41YDR425W RAD53P22216 821 aa3.26□□□□□ -1.89
SNX41YDR425W RPP1P38786 293 aa3.26□□□□□ -1.89
SNX41YDR425W RLP7P40693 322 aaKnown RBP3.26□□□□□ -1.89
SNX41YDR425W HSV2P50079 448 aaPredicted RBP3.26□□□□□ -1.89
SNX41YDR425W ZDS1P50111 915 aaKnown RBP3.26□□□□□ -1.89
SNX41YDR425W MRPS35P53292 345 aa3.26□□□□□ -1.89
SNX41YDR425W RNT1Q02555 471 aa3.26□□□□□ -1.89
SNX41YDR425W RSC3Q06639 885 aa3.26□□□□□ -1.89
SNX41YDR425W YTA7P40340 1379 aa3.25□□□□□ -1.89
SNX41YDR425W OAR1P35731 278 aa3.25□□□□□ -1.89
SNX41YDR425W SIC1P38634 284 aa3.25□□□□□ -1.89
SNX41YDR425W NUP82P40368 713 aa3.25□□□□□ -1.89
SNX41YDR425W PFA3P42836 336 aa3.25□□□□□ -1.89
SNX41YDR425W SSY5P47002 699 aa3.25□□□□□ -1.89
SNX41YDR425W ZIP2P53061 704 aa3.25□□□□□ -1.89
SNX41YDR425W YLR415CO13578 112 aa3.24□□□□□ -1.89
SNX41YDR425W PPR1P07272 904 aaPredicted RBP3.24□□□□□ -1.89
SNX41YDR425W SUL1P38359 859 aa3.24□□□□□ -1.89
SNX41YDR425W PZF1P39933 429 aa3.24□□□□□ -1.89
SNX41YDR425W PKH1Q03407 766 aa3.24□□□□□ -1.89
SNX41YDR425W DLT1Q04216 342 aa3.24□□□□□ -1.89
SNX41YDR425W YLR125WQ12138 136 aa3.24□□□□□ -1.89
SNX41YDR425W DIF1O13577 133 aa3.24□□□□□ -1.89
SNX41YDR425W ALG7P07286 448 aa3.24□□□□□ -1.89
SNX41YDR425W CIT2P08679 460 aa3.24□□□□□ -1.89
SNX41YDR425W NGG1P32494 702 aa3.24□□□□□ -1.89
SNX41YDR425W MCD4P36051 919 aa3.24□□□□□ -1.89
SNX41YDR425W MOH1P38191 138 aa3.24□□□□□ -1.89
SNX41YDR425W YBR053CP38235 358 aa3.24□□□□□ -1.89
SNX41YDR425W SAK1P38990 1142 aa3.24□□□□□ -1.89
SNX41YDR425W ELO3P40319 345 aa3.24□□□□□ -1.89
SNX41YDR425W CAF16P43569 289 aa3.24□□□□□ -1.89
SNX41YDR425W YDR338CQ05497 695 aa3.24□□□□□ -1.89
SNX41YDR425W FPR4Q06205 392 aaPredicted RBP3.24□□□□□ -1.89
SNX41YDR425W OMS1Q06668 471 aa3.24□□□□□ -1.89
SNX41YDR425W MET3P08536 511 aa3.23□□□□□ -1.89
SNX41YDR425W PHO8P11491 566 aa3.23□□□□□ -1.89
SNX41YDR425W MSH2P25847 964 aa3.23□□□□□ -1.89
SNX41YDR425W SAP190P36123 1033 aa3.23□□□□□ -1.89
SNX41YDR425W AMA1P50082 593 aa3.23□□□□□ -1.89
SNX41YDR425W FRE5Q08908 694 aa3.23□□□□□ -1.89
SNX41YDR425W PER1P25625 357 aa3.22□□□□□ -1.89
SNX41YDR425W FKH2P41813 862 aa3.22□□□□□ -1.89
SNX41YDR425W ALY2P47029 1046 aa3.22□□□□□ -1.89
SNX41YDR425W UGO1Q03327 502 aa3.22□□□□□ -1.89
SNX41YDR425W ADY4Q05955 493 aa3.22□□□□□ -1.89
SNX41YDR425W ATG11Q12527 1178 aa3.22□□□□□ -1.89
SNX41YDR425W CAF20P12962 161 aaKnown RBP3.22□□□□□ -1.89
SNX41YDR425W MEF1P25039 761 aa3.22□□□□□ -1.89
SNX41YDR425W STO1P34160 861 aaKnown RBP3.22□□□□□ -1.89
SNX41YDR425W ECM1P39715 212 aa3.22□□□□□ -1.89
SNX41YDR425W OSW7P43611 510 aa3.22□□□□□ -1.89
SNX41YDR425W BNA2P47125 453 aa3.22□□□□□ -1.89
SNX41YDR425W MUP1P50276 574 aa3.22□□□□□ -1.89
SNX41YDR425W INO80P53115 1489 aa3.22□□□□□ -1.89
SNX41YDR425W CDC9P04819 755 aa3.21□□□□□ -1.9
SNX41YDR425W YBR259WP38338 688 aa3.21□□□□□ -1.9
SNX41YDR425W SHR5P41912 237 aa3.21□□□□□ -1.9
SNX41YDR425W SNP1Q00916 300 aaPredicted RBP3.21□□□□□ -1.9
SNX41YDR425W NRG1Q03125 231 aa3.21□□□□□ -1.9
SNX41YDR425W ASM4Q05166 528 aa3.21□□□□□ -1.9
SNX41YDR425W LAT1P12695 482 aaKnown RBP3.2□□□□□ -1.9
SNX41YDR425W GSY1P23337 708 aa3.2□□□□□ -1.9
SNX41YDR425W MIH1P23748 554 aa3.2□□□□□ -1.9
SNX41YDR425W YIR042CP40586 236 aa3.2□□□□□ -1.9
SNX41YDR425W BAP3P41815 604 aa3.2□□□□□ -1.9
SNX41YDR425W TGL5Q12043 749 aa3.2□□□□□ -1.9
SNX41YDR425W ACF2Q12168 779 aa3.2□□□□□ -1.9
SNX41YDR425W TAD3Q9URQ3 322 aa3.2□□□□□ -1.9
SNX41YDR425W SRD1P09007 221 aa3.2□□□□□ -1.9
SNX41YDR425W VBA3P25594 458 aa3.2□□□□□ -1.9
SNX41YDR425W YEL1P34225 687 aa3.2□□□□□ -1.9
SNX41YDR425W HOS4P40480 1083 aa3.2□□□□□ -1.9
SNX41YDR425W YJL163CP46996 555 aa3.2□□□□□ -1.9
SNX41YDR425W MTR3P48240 250 aaPredicted RBP3.2□□□□□ -1.9
SNX41YDR425W COG8Q04632 607 aa3.2□□□□□ -1.9
SNX41YDR425W YLR149CQ99296 730 aa3.2□□□□□ -1.9
SNX41YDR425W THI4P32318 326 aa3.19□□□□□ -1.9
SNX41YDR425W PEX6P33760 1030 aa3.19□□□□□ -1.9
SNX41YDR425W MIP6P38760 659 aaKnown RBP3.19□□□□□ -1.9
SNX41YDR425W STB4P50104 949 aa3.19□□□□□ -1.9
SNX41YDR425W MCH5Q08777 521 aa3.19□□□□□ -1.9
SNX41YDR425W HOG1P32485 435 aa3.18□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 102.8 ms