RNA–Protein interactions for RNA: YDR311W

TFB1, Transcript of Subunit of TFIIH and nucleotide excision repair factor 3 complexes, yeast

Gene TFB1, Length 1,929 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFB1	YDR311W	YLL058W	Q12198	575 aa		3.36	□□□□□ -1.87
TFB1	YDR311W	YBR182C-A	Q8TGU6	64 aa		3.36	□□□□□ -1.87
TFB1	YDR311W	CHS2	P14180	963 aa		3.35	□□□□□ -1.87
TFB1	YDR311W	ATP12	P22135	325 aa		3.35	□□□□□ -1.87
TFB1	YDR311W	SSH4	P32343	579 aa		3.35	□□□□□ -1.87
TFB1	YDR311W	YKU70	P32807	602 aa		3.35	□□□□□ -1.87
TFB1	YDR311W	PTH2	P34222	208 aa		3.35	□□□□□ -1.87
TFB1	YDR311W	MAC1	P35192	417 aa		3.35	□□□□□ -1.87
TFB1	YDR311W	YKR051W	P36142	418 aa		3.35	□□□□□ -1.87
TFB1	YDR311W	FAT1	P38225	669 aa		3.35	□□□□□ -1.87
TFB1	YDR311W	HSL7	P38274	827 aa		3.35	□□□□□ -1.87
TFB1	YDR311W	VPS27	P40343	622 aa	Known RBP	3.35	□□□□□ -1.87
TFB1	YDR311W	RLP7	P40693	322 aa	Known RBP	3.35	□□□□□ -1.87
TFB1	YDR311W	ERR3	P42222	437 aa		3.35	□□□□□ -1.87
TFB1	YDR311W	QRI7	P43122	407 aa		3.35	□□□□□ -1.87
TFB1	YDR311W	SLD3	P53135	668 aa		3.35	□□□□□ -1.87
TFB1	YDR311W	SKY1	Q03656	742 aa		3.35	□□□□□ -1.87
TFB1	YDR311W	TPP1	Q03796	238 aa		3.35	□□□□□ -1.87
TFB1	YDR311W	YPR196W	Q06595	470 aa		3.35	□□□□□ -1.87
TFB1	YDR311W	REH1	Q06709	432 aa		3.35	□□□□□ -1.87
TFB1	YDR311W	Q0142	Q9ZZW4	58 aa		3.35	□□□□□ -1.87
TFB1	YDR311W	MNN4	P36044	1178 aa		3.34	□□□□□ -1.87
TFB1	YDR311W	CTH1	P47976	325 aa		3.34	□□□□□ -1.87
TFB1	YDR311W	ENV11	P53246	860 aa		3.34	□□□□□ -1.87
TFB1	YDR311W	YGR130C	P53278	816 aa		3.34	□□□□□ -1.87
TFB1	YDR311W	MOT3	P54785	490 aa	Known RBP	3.34	□□□□□ -1.87
TFB1	YDR311W	YHM2	Q04013	314 aa		3.34	□□□□□ -1.87
TFB1	YDR311W	PUS7	Q08647	676 aa	Known RBP	3.34	□□□□□ -1.87
TFB1	YDR311W	HRK1	Q08732	759 aa	Known RBP	3.34	□□□□□ -1.87
TFB1	YDR311W	YPR027C	Q12079	277 aa		3.34	□□□□□ -1.87
TFB1	YDR311W	YOL087C	Q99247	1116 aa		3.34	□□□□□ -1.87
TFB1	YDR311W	OAF3	P36023	863 aa		3.34	□□□□□ -1.88
TFB1	YDR311W	ACA1	P39970	489 aa		3.34	□□□□□ -1.88
TFB1	YDR311W	CEP3	P40969	608 aa		3.34	□□□□□ -1.88
TFB1	YDR311W	ALT1	P52893	592 aa		3.34	□□□□□ -1.88
TFB1	YDR311W	NPY1	P53164	384 aa		3.34	□□□□□ -1.88
TFB1	YDR311W	TNA1	P53322	534 aa		3.34	□□□□□ -1.88
TFB1	YDR311W	CEG1	Q01159	459 aa	Predicted RBP	3.34	□□□□□ -1.88
TFB1	YDR311W	CRR1	Q05790	422 aa		3.34	□□□□□ -1.88
TFB1	YDR311W	XYL2	Q07993	356 aa		3.34	□□□□□ -1.88
TFB1	YDR311W	PEX15	Q08215	383 aa		3.34	□□□□□ -1.88
TFB1	YDR311W	SSP2	Q08646	371 aa		3.34	□□□□□ -1.88
TFB1	YDR311W	HFI1	Q12060	488 aa		3.34	□□□□□ -1.88
TFB1	YDR311W	YOL114C	Q12322	202 aa		3.34	□□□□□ -1.88
TFB1	YDR311W	SEC18	P18759	758 aa	Known RBP	3.33	□□□□□ -1.88
TFB1	YDR311W	ACE2	P21192	770 aa		3.33	□□□□□ -1.88
TFB1	YDR311W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	3.33	□□□□□ -1.88	RIP-Chip
TFB1	YDR311W	YAP1801	P38856	637 aa		3.33	□□□□□ -1.88
TFB1	YDR311W	SAP185	P40856	1058 aa		3.33	□□□□□ -1.88
TFB1	YDR311W	TAN1	P53072	289 aa	Predicted RBP	3.33	□□□□□ -1.88
TFB1	YDR311W	NOG2	P53742	486 aa	Known RBP	3.33	□□□□□ -1.88
TFB1	YDR311W	GIR2	Q03768	265 aa	Predicted RBP	3.33	□□□□□ -1.88
TFB1	YDR311W	CIA1	Q05583	330 aa		3.33	□□□□□ -1.88
TFB1	YDR311W	PSR2	Q07949	397 aa		3.33	□□□□□ -1.88
TFB1	YDR311W	YOR059C	Q08448	450 aa	Known RBP	3.33	□□□□□ -1.88
TFB1	YDR311W	DIF1	O13577	133 aa		3.32	□□□□□ -1.88
TFB1	YDR311W	MSB1	P21339	1137 aa	Known RBP	3.32	□□□□□ -1.88
TFB1	YDR311W	RFA1	P22336	621 aa	Known RBP	3.32	□□□□□ -1.88
TFB1	YDR311W	URA1	P28272	314 aa	Predicted RBP	3.32	□□□□□ -1.88
TFB1	YDR311W	CYS3	P31373	394 aa	Known RBP	3.32	□□□□□ -1.88
TFB1	YDR311W	FUN30	P31380	1131 aa		3.32	□□□□□ -1.88
TFB1	YDR311W	RPD3	P32561	433 aa		3.32	□□□□□ -1.88
TFB1	YDR311W	EMP65	P40085	556 aa		3.32	□□□□□ -1.88
TFB1	YDR311W	SHR5	P41912	237 aa		3.32	□□□□□ -1.88
TFB1	YDR311W	HFM1	P51979	1187 aa		3.32	□□□□□ -1.88
TFB1	YDR311W	UBA2	P52488	636 aa		3.32	□□□□□ -1.88
TFB1	YDR311W	HDA1	P53973	706 aa		3.32	□□□□□ -1.88
TFB1	YDR311W	DCS2	Q12123	353 aa		3.32	□□□□□ -1.88
TFB1	YDR311W	RRI2	Q12348	645 aa		3.32	□□□□□ -1.88
TFB1	YDR311W	NOT3	P06102	836 aa	Known RBP	3.32	□□□□□ -1.88
TFB1	YDR311W	RPS4A	P0CX35	261 aa	Known RBP	3.32	□□□□□ -1.88
TFB1	YDR311W	RPS4B	P0CX36	261 aa	Known RBP	3.32	□□□□□ -1.88
TFB1	YDR311W	HCA4	P20448	770 aa	Known RBP	3.32	□□□□□ -1.88
TFB1	YDR311W	MCM10	P32354	571 aa		3.32	□□□□□ -1.88
TFB1	YDR311W	SAP190	P36123	1033 aa		3.32	□□□□□ -1.88
TFB1	YDR311W	TOS1	P38288	455 aa		3.32	□□□□□ -1.88
TFB1	YDR311W	ARP4	P80428	489 aa		3.32	□□□□□ -1.88
TFB1	YDR311W	SDH1	Q00711	640 aa		3.32	□□□□□ -1.88
TFB1	YDR311W	PTA1	Q01329	785 aa	Predicted RBP	3.32	□□□□□ -1.88
TFB1	YDR311W	RPN7	Q06103	429 aa	Known RBP	3.32	□□□□□ -1.88
TFB1	YDR311W	HIM1	Q06674	414 aa		3.32	□□□□□ -1.88
TFB1	YDR311W	YOR022C	Q12204	715 aa		3.32	□□□□□ -1.88
TFB1	YDR311W	APM4	Q99186	491 aa		3.32	□□□□□ -1.88
TFB1	YDR311W	YLR149C	Q99296	730 aa		3.32	□□□□□ -1.88
TFB1	YDR311W	CYC7	P00045	113 aa		3.31	□□□□□ -1.88
TFB1	YDR311W	SAM35	P14693	329 aa		3.31	□□□□□ -1.88
TFB1	YDR311W	GFD2	P25370	566 aa	Known RBP	3.31	□□□□□ -1.88
TFB1	YDR311W	SEC65	P29478	273 aa		3.31	□□□□□ -1.88
TFB1	YDR311W	BEM3	P32873	1128 aa		3.31	□□□□□ -1.88
TFB1	YDR311W	ECM21	P38167	1117 aa	Known RBP	3.31	□□□□□ -1.88
TFB1	YDR311W	HOS4	P40480	1083 aa		3.31	□□□□□ -1.88
TFB1	YDR311W	TAF1	P46677	1066 aa		3.31	□□□□□ -1.88
TFB1	YDR311W	PAP2	P53632	584 aa	Known RBP	3.31	□□□□□ -1.88
TFB1	YDR311W	CNM67	P53865	581 aa	Known RBP	3.31	□□□□□ -1.88
TFB1	YDR311W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	3.31	□□□□□ -1.88	not detected
TFB1	YDR311W	MDM1	Q01846	1127 aa		3.31	□□□□□ -1.88
TFB1	YDR311W	VPS30	Q02948	557 aa		3.31	□□□□□ -1.88
TFB1	YDR311W	OMS1	Q06668	471 aa		3.31	□□□□□ -1.88
TFB1	YDR311W	BRE4	Q07660	1125 aa		3.31	□□□□□ -1.88
TFB1	YDR311W	HAL9	Q12180	1030 aa		3.31	□□□□□ -1.88

Retrieved 100 of 5,963 RNA–protein pairs in 7.9 ms