RNA–Protein interactions for RNA: YDL074C

BRE1, Transcript of E3 ubiquitin ligase, yeastyeast

Gene BRE1, Length 2,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRE1YDL074C YSC83P32792 385 aa2.26□□□□□ -2.05
BRE1YDL074C RPC25P35718 212 aa2.26□□□□□ -2.05
BRE1YDL074C PHO88P38264 188 aaPredicted RBP2.26□□□□□ -2.05
BRE1YDL074C ERG7P38604 731 aa2.26□□□□□ -2.05
BRE1YDL074C PIH1P38768 344 aa2.26□□□□□ -2.05
BRE1YDL074C KEL1P38853 1164 aaKnown RBP2.26□□□□□ -2.05
BRE1YDL074C BIM1P40013 344 aa2.26□□□□□ -2.05
BRE1YDL074C GPD2P41911 440 aaKnown RBP2.26□□□□□ -2.05
BRE1YDL074C BTN2P53286 410 aa2.26□□□□□ -2.05
BRE1YDL074C NGL3Q03210 505 aa2.26□□□□□ -2.05
BRE1YDL074C YML037CQ03703 340 aa2.26□□□□□ -2.05
BRE1YDL074C YMR114CQ04471 368 aaKnown RBP2.26□□□□□ -2.05
BRE1YDL074C HPF1Q05164 967 aa2.26□□□□□ -2.05
BRE1YDL074C SPH1Q06160 661 aa2.26□□□□□ -2.05
BRE1YDL074C ISA1Q07821 250 aaPredicted RBP2.26□□□□□ -2.05
BRE1YDL074C HFI1Q12060 488 aa2.26□□□□□ -2.05
BRE1YDL074C ARP6Q12509 438 aa2.26□□□□□ -2.05
BRE1YDL074C CSR2Q12734 1121 aa2.26□□□□□ -2.05
BRE1YDL074C FLO11P08640 1367 aa2.26□□□□□ -2.05
BRE1YDL074C NAT1P12945 854 aaKnown RBP2.26□□□□□ -2.05
BRE1YDL074C PRP22P24384 1145 aaKnown RBP2.26□□□□□ -2.05
BRE1YDL074C KIP1P28742 1111 aa2.26□□□□□ -2.05
BRE1YDL074C GCD11P32481 527 aaKnown RBP2.26□□□□□ -2.05
BRE1YDL074C COT1P32798 439 aa2.26□□□□□ -2.05
BRE1YDL074C TIM23P32897 222 aa2.26□□□□□ -2.05
BRE1YDL074C TFC4P33339 1025 aa2.26□□□□□ -2.05
BRE1YDL074C MCD4P36051 919 aa2.26□□□□□ -2.05
BRE1YDL074C SHM1P37292 490 aaPredicted RBP2.26□□□□□ -2.05
BRE1YDL074C RCK2P38623 610 aa2.26□□□□□ -2.05
BRE1YDL074C SMF1P38925 575 aa2.26□□□□□ -2.05
BRE1YDL074C PMC1P38929 1173 aaPredicted RBP2.26□□□□□ -2.05
BRE1YDL074C FET4P40988 552 aa2.26□□□□□ -2.05
BRE1YDL074C NET1P47035 1189 aa2.26□□□□□ -2.05
BRE1YDL074C YJR039WP47107 1121 aa2.26□□□□□ -2.05
BRE1YDL074C NBP1P52919 319 aaPredicted RBP2.26□□□□□ -2.05
BRE1YDL074C SQS1P53866 767 aaKnown RBP2.26□□□□□ -2.05
BRE1YDL074C TIM8P57744 87 aa2.26□□□□□ -2.05
BRE1YDL074C RPA49Q01080 415 aaPredicted RBP2.26□□□□□ -2.05
BRE1YDL074C PTA1Q01329 785 aaPredicted RBP2.26□□□□□ -2.05
BRE1YDL074C YML119WQ03208 357 aa2.26□□□□□ -2.05
BRE1YDL074C CWC15Q03772 175 aaKnown RBP2.26□□□□□ -2.05
BRE1YDL074C SOV1Q04748 898 aa2.26□□□□□ -2.05
BRE1YDL074C ECI1Q05871 280 aa2.26□□□□□ -2.05
BRE1YDL074C CSR1Q06705 408 aaKnown RBP2.26□□□□□ -2.05
BRE1YDL074C CRD1Q07560 283 aa2.26□□□□□ -2.05
BRE1YDL074C CWC2Q12046 339 aaPredicted RBP2.26□□□□□ -2.05
BRE1YDL074C HIF1Q12373 385 aa2.26□□□□□ -2.05
BRE1YDL074C SEY1Q99287 776 aa2.26□□□□□ -2.05
BRE1YDL074C RPS3P05750 240 aaKnown RBP2.25□□□□□ -2.05
BRE1YDL074C CDC33P07260 213 aaKnown RBP2.25□□□□□ -2.05
BRE1YDL074C PMS1P14242 873 aa2.25□□□□□ -2.05
BRE1YDL074C VMA2P16140 517 aaKnown RBP2.25□□□□□ -2.05
BRE1YDL074C SPO16P17122 198 aa2.25□□□□□ -2.05
BRE1YDL074C CDC10P25342 322 aaKnown RBP2.25□□□□□ -2.05
BRE1YDL074C RME1P32338 300 aaKnown RBP2.25□□□□□ -2.05
BRE1YDL074C GCG1P32656 232 aaKnown RBP2.25□□□□□ -2.05
BRE1YDL074C BUD2P33314 1104 aa2.25□□□□□ -2.05
BRE1YDL074C TGL1P34163 548 aa2.25□□□□□ -2.05
BRE1YDL074C SLD2P34252 453 aa2.25□□□□□ -2.05
BRE1YDL074C MCR1P36060 302 aaKnown RBP2.25□□□□□ -2.05
BRE1YDL074C TRZ1P36159 838 aaPredicted RBP2.25□□□□□ -2.05
BRE1YDL074C TVP38P36164 337 aa2.25□□□□□ -2.05
BRE1YDL074C UBP14P38237 781 aaKnown RBP2.25□□□□□ -2.05
BRE1YDL074C VPS41P38959 992 aa2.25□□□□□ -2.05
BRE1YDL074C YEL025CP39991 1188 aa2.25□□□□□ -2.05
BRE1YDL074C NPP2P39997 493 aa2.25□□□□□ -2.05
BRE1YDL074C FTR1P40088 404 aa2.25□□□□□ -2.05
BRE1YDL074C PEA2P40091 420 aa2.25□□□□□ -2.05
BRE1YDL074C YTA12P40341 825 aa2.25□□□□□ -2.05
BRE1YDL074C RRN7P40992 514 aa2.25□□□□□ -2.05
BRE1YDL074C SCD6P45978 349 aaKnown RBP RIP-Chip data2.25□□□□□ -2.05 RIP-Chip
BRE1YDL074C VPS53P47061 822 aa2.25□□□□□ -2.05
BRE1YDL074C JJJ3P47138 172 aa2.25□□□□□ -2.05
BRE1YDL074C YGR125WP53273 1036 aa2.25□□□□□ -2.05
BRE1YDL074C ATG16Q03818 150 aa2.25□□□□□ -2.05
BRE1YDL074C UTP13Q05946 817 aaKnown RBP2.25□□□□□ -2.05
BRE1YDL074C YOL075CQ08234 1294 aa2.25□□□□□ -2.05
BRE1YDL074C FAL1Q12099 399 aaKnown RBP2.25□□□□□ -2.05
BRE1YDL074C TY3A-GQ12173 290 aa2.25□□□□□ -2.05
BRE1YDL074C RKM4Q12504 494 aa2.25□□□□□ -2.05
BRE1YDL074C YKL068W-AQ3E826 78 aa2.25□□□□□ -2.05
BRE1YDL074C TY3A-IQ99219 290 aa2.25□□□□□ -2.05
BRE1YDL074C ARD1P07347 238 aaPredicted RBP2.24□□□□□ -2.05
BRE1YDL074C ADH4P10127 382 aa2.24□□□□□ -2.05
BRE1YDL074C SUP45P12385 437 aaKnown RBP2.24□□□□□ -2.05
BRE1YDL074C DAL7P21826 554 aa2.24□□□□□ -2.05
BRE1YDL074C ESS1P22696 170 aa2.24□□□□□ -2.05
BRE1YDL074C SSD1P24276 1250 aaKnown RBP RIP-Chip data2.24□□□□□ -2.05not detected
BRE1YDL074C PKC1P24583 1151 aa2.24□□□□□ -2.05
BRE1YDL074C CDC48P25694 835 aaKnown RBP2.24□□□□□ -2.05
BRE1YDL074C DBF4P32325 704 aa2.24□□□□□ -2.05
BRE1YDL074C DPH2P32461 534 aa2.24□□□□□ -2.05
BRE1YDL074C EUG1P32474 517 aa2.24□□□□□ -2.05
BRE1YDL074C MUD1P32605 298 aaKnown RBP2.24□□□□□ -2.05
BRE1YDL074C YME1P32795 747 aa2.24□□□□□ -2.05
BRE1YDL074C RAD54P32863 898 aa2.24□□□□□ -2.05
BRE1YDL074C SKG6P32900 734 aaPredicted RBP2.24□□□□□ -2.05
BRE1YDL074C PIN4P34217 668 aaKnown RBP RIP-Chip data2.24□□□□□ -2.05not detected
BRE1YDL074C YKL050CP35736 922 aa2.24□□□□□ -2.05
BRE1YDL074C STV1P37296 890 aa2.24□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 88.2 ms