RNA–Protein interactions for RNA: YDL058W

USO1, Transcript of Essential protein involved in vesicle-mediated ER to Golgi transport, yeastyeast

Gene USO1, Length 5,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USO1YDL058W MET4P32389 672 aa2.15□□□□□ -2.07
USO1YDL058W FRD1P32614 470 aaKnown RBP2.15□□□□□ -2.07
USO1YDL058W NGR1P32831 672 aaKnown RBP2.15□□□□□ -2.07
USO1YDL058W ATG14P38270 344 aa2.15□□□□□ -2.07
USO1YDL058W FRT2P39734 528 aa2.15□□□□□ -2.07
USO1YDL058W ALD5P40047 520 aaKnown RBP2.15□□□□□ -2.07
USO1YDL058W NTA1P40354 457 aa2.15□□□□□ -2.07
USO1YDL058W GYP8P43570 497 aa2.15□□□□□ -2.07
USO1YDL058W UBP6P43593 499 aaKnown RBP2.15□□□□□ -2.07
USO1YDL058W FAA4P47912 694 aaKnown RBP2.15□□□□□ -2.07
USO1YDL058W KAP114P53067 1004 aa2.15□□□□□ -2.07
USO1YDL058W PEX8P53248 589 aa2.15□□□□□ -2.07
USO1YDL058W PGA2P53903 129 aa2.15□□□□□ -2.07
USO1YDL058W ORC3P54790 616 aa2.15□□□□□ -2.07
USO1YDL058W RBS1Q05672 457 aaKnown RBP2.15□□□□□ -2.07
USO1YDL058W PIG1Q06216 648 aa2.15□□□□□ -2.07
USO1YDL058W FMP40Q08968 688 aaPredicted RBP2.15□□□□□ -2.07
USO1YDL058W YTM1Q12024 460 aaPredicted RBP2.15□□□□□ -2.07
USO1YDL058W YOR114WQ12219 294 aa2.15□□□□□ -2.07
USO1YDL058W MCM16Q12262 181 aa2.15□□□□□ -2.07
USO1YDL058W YBR255C-AQ3E776 120 aa2.15□□□□□ -2.07
USO1YDL058W YCF1P39109 1515 aaKnown RBP2.15□□□□□ -2.07
USO1YDL058W CIT1P00890 479 aa2.15□□□□□ -2.07
USO1YDL058W STF1P01098 86 aa2.15□□□□□ -2.07
USO1YDL058W CIT2P08679 460 aa2.15□□□□□ -2.07
USO1YDL058W NAT1P12945 854 aaKnown RBP2.15□□□□□ -2.07
USO1YDL058W RAD4P14736 754 aa2.15□□□□□ -2.07
USO1YDL058W AEP2P22136 580 aa2.15□□□□□ -2.07
USO1YDL058W RPL8BP29453 256 aaKnown RBP2.15□□□□□ -2.07
USO1YDL058W CRM1P30822 1084 aaKnown RBP2.15□□□□□ -2.07
USO1YDL058W MKS1P34072 584 aa2.15□□□□□ -2.07
USO1YDL058W NUT1P53114 1132 aa2.15□□□□□ -2.07
USO1YDL058W TIM11P81449 96 aaPredicted RBP2.15□□□□□ -2.07
USO1YDL058W NUP116Q02630 1113 aa2.15□□□□□ -2.07
USO1YDL058W YMR018WQ04364 514 aa2.15□□□□□ -2.07
USO1YDL058W RDR1Q08904 546 aa2.15□□□□□ -2.07
USO1YDL058W CSM4Q08955 156 aa2.15□□□□□ -2.07
USO1YDL058W YDL085C-AQ3E7B7 68 aaKnown RBP2.15□□□□□ -2.07
USO1YDL058W PMA1P05030 918 aaKnown RBP2.15□□□□□ -2.07
USO1YDL058W MPH3P0CE00 602 aa2.15□□□□□ -2.07
USO1YDL058W SFP1P32432 683 aa2.15□□□□□ -2.07
USO1YDL058W PDB1P32473 366 aaKnown RBP2.15□□□□□ -2.07
USO1YDL058W RAD54P32863 898 aa2.15□□□□□ -2.07
USO1YDL058W SPO22P40511 975 aa2.15□□□□□ -2.07
USO1YDL058W CIN5P40917 295 aa2.15□□□□□ -2.07
USO1YDL058W RPA14P50106 137 aa2.15□□□□□ -2.07
USO1YDL058W DIP5P53388 608 aa2.15□□□□□ -2.07
USO1YDL058W NAB6Q03735 1134 aaKnown RBP RIP-Chip data2.15□□□□□ -2.07not detected
USO1YDL058W CUR1Q06469 252 aa2.15□□□□□ -2.07
USO1YDL058W ABP140Q08641 628 aaKnown RBP2.15□□□□□ -2.07
USO1YDL058W MUM3Q08750 479 aa2.15□□□□□ -2.07
USO1YDL058W AI1P03875 834 aa2.14□□□□□ -2.07
USO1YDL058W PEP5P12868 1029 aa2.14□□□□□ -2.07
USO1YDL058W PUP1P25043 261 aa2.14□□□□□ -2.07
USO1YDL058W EAP1P36041 632 aaKnown RBP2.14□□□□□ -2.07
USO1YDL058W BYE1P36106 594 aa2.14□□□□□ -2.07
USO1YDL058W PMC1P38929 1173 aaPredicted RBP2.14□□□□□ -2.07
USO1YDL058W SAK1P38990 1142 aa2.14□□□□□ -2.07
USO1YDL058W MNN1P39106 762 aa2.14□□□□□ -2.07
USO1YDL058W UIP3P39547 235 aa2.14□□□□□ -2.07
USO1YDL058W SDS3P40505 327 aa2.14□□□□□ -2.07
USO1YDL058W HUL4P40985 892 aa2.14□□□□□ -2.07
USO1YDL058W MMM1P41800 426 aa2.14□□□□□ -2.07
USO1YDL058W MRPS18P42847 217 aa2.14□□□□□ -2.07
USO1YDL058W ALK1P43633 760 aaKnown RBP2.14□□□□□ -2.07
USO1YDL058W SKP1P52286 194 aa2.14□□□□□ -2.07
USO1YDL058W COS6P53344 381 aa2.14□□□□□ -2.07
USO1YDL058W PEX29Q03370 554 aa2.14□□□□□ -2.07
USO1YDL058W OMS1Q06668 471 aa2.14□□□□□ -2.07
USO1YDL058W GRC3Q07845 632 aa2.14□□□□□ -2.07
USO1YDL058W ZEO1Q08245 113 aa2.14□□□□□ -2.07
USO1YDL058W HRK1Q08732 759 aaKnown RBP2.14□□□□□ -2.07
USO1YDL058W GNT1Q12096 491 aa2.14□□□□□ -2.07
USO1YDL058W SLX4Q12098 748 aa2.14□□□□□ -2.07
USO1YDL058W YOR214CQ12282 236 aa2.14□□□□□ -2.07
USO1YDL058W HXK1P04806 485 aaKnown RBP2.14□□□□□ -2.07
USO1YDL058W MIS1P09440 975 aaKnown RBP2.14□□□□□ -2.07
USO1YDL058W PHO8P11491 566 aa2.14□□□□□ -2.07
USO1YDL058W CDC15P27636 974 aa2.14□□□□□ -2.07
USO1YDL058W SRP40P32583 406 aaPredicted RBP2.14□□□□□ -2.07
USO1YDL058W PEX6P33760 1030 aa2.14□□□□□ -2.07
USO1YDL058W ATG19P35193 415 aa2.14□□□□□ -2.07
USO1YDL058W SHG1P38337 142 aa2.14□□□□□ -2.07
USO1YDL058W CBR1P38626 284 aaKnown RBP2.14□□□□□ -2.07
USO1YDL058W GLO3P38682 493 aaKnown RBP2.14□□□□□ -2.07
USO1YDL058W RPN10P38886 268 aaKnown RBP2.14□□□□□ -2.07
USO1YDL058W XDJ1P39102 459 aa2.14□□□□□ -2.07
USO1YDL058W PIK1P39104 1066 aa2.14□□□□□ -2.07
USO1YDL058W COX15P40086 486 aa2.14□□□□□ -2.07
USO1YDL058W CST6P40535 587 aa2.14□□□□□ -2.07
USO1YDL058W EPS1P40557 701 aa2.14□□□□□ -2.07
USO1YDL058W MNN11P46985 422 aaKnown RBP2.14□□□□□ -2.07
USO1YDL058W ZPR1P53303 486 aaKnown RBP2.14□□□□□ -2.07
USO1YDL058W DNM1P54861 757 aa2.14□□□□□ -2.07
USO1YDL058W LAP3Q01532 483 aaKnown RBP RIP-Chip data2.14□□□□□ -2.07not detected
USO1YDL058W SKY1Q03656 742 aa2.14□□□□□ -2.07
USO1YDL058W YOR378WQ08902 515 aa2.14□□□□□ -2.07
USO1YDL058W YPL272CQ08984 517 aa2.14□□□□□ -2.07
USO1YDL058W RAD61Q99359 647 aa2.14□□□□□ -2.07
USO1YDL058W TY1B-BRQ12193 1756 aa2.14□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 161.5 ms