RNA–Protein interactions for RNA: YCR004C

YCP4, Transcript of Protein of unknown function, yeastyeast

Gene YCP4, Length 744 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCP4YCR004C CUP1-1P0CX80 61 aa9.12□□□□□ -0.95
YCP4YCR004C CUP1-2P0CX81 61 aa9.12□□□□□ -0.95
YCP4YCR004C CKA2P19454 339 aa9.12□□□□□ -0.95
YCP4YCR004C YSC83P32792 385 aa9.12□□□□□ -0.95
YCP4YCR004C PGM2P37012 569 aaKnown RBP9.12□□□□□ -0.95
YCP4YCR004C UBP13P38187 747 aa9.12□□□□□ -0.95
YCP4YCR004C YEL076CP39971 216 aa9.12□□□□□ -0.95
YCP4YCR004C ZAP1P47043 880 aa9.12□□□□□ -0.95
YCP4YCR004C ATH1P48016 1211 aa9.12□□□□□ -0.95
YCP4YCR004C ORC5P50874 479 aa9.12□□□□□ -0.95
YCP4YCR004C GUP1P53154 560 aa9.12□□□□□ -0.95
YCP4YCR004C CAF120P53836 1060 aa9.12□□□□□ -0.95
YCP4YCR004C TOF1P53840 1238 aa9.12□□□□□ -0.95
YCP4YCR004C DCS2Q12123 353 aa9.12□□□□□ -0.95
YCP4YCR004C GAL80P04387 435 aa9.11□□□□□ -0.95
YCP4YCR004C HOM2P13663 365 aaKnown RBP9.11□□□□□ -0.95
YCP4YCR004C SPO11P23179 398 aa9.11□□□□□ -0.95
YCP4YCR004C PET10P36139 283 aa9.11□□□□□ -0.95
YCP4YCR004C KTR4P38131 464 aa9.11□□□□□ -0.95
YCP4YCR004C MED6P38782 295 aa9.11□□□□□ -0.95
YCP4YCR004C TAF1P46677 1066 aa9.11□□□□□ -0.95
YCP4YCR004C FYV8P46949 817 aaKnown RBP9.11□□□□□ -0.95
YCP4YCR004C CTF18P49956 741 aa9.11□□□□□ -0.95
YCP4YCR004C SLG1P54867 378 aa9.11□□□□□ -0.95
YCP4YCR004C LEA1Q08963 238 aaPredicted RBP9.11□□□□□ -0.95
YCP4YCR004C STB3Q12427 513 aa9.11□□□□□ -0.95
YCP4YCR004C APM4Q99186 491 aa9.11□□□□□ -0.95
YCP4YCR004C BEM2P39960 2167 aaKnown RBP9.1□□□□□ -0.95
YCP4YCR004C SSB1P11484 613 aaKnown RBP9.1□□□□□ -0.95
YCP4YCR004C ECM32P32644 1121 aaKnown RBP9.1□□□□□ -0.95
YCP4YCR004C YBR284WP38150 797 aa9.1□□□□□ -0.95
YCP4YCR004C SSB2P40150 613 aaKnown RBP9.1□□□□□ -0.95
YCP4YCR004C ULI1P43604 169 aa9.1□□□□□ -0.95
YCP4YCR004C UBA2P52488 636 aa9.1□□□□□ -0.95
YCP4YCR004C PDH1Q12428 516 aaKnown RBP9.1□□□□□ -0.95
YCP4YCR004C RNR2P09938 399 aaKnown RBP9.09□□□□□ -0.95
YCP4YCR004C MNN4P36044 1178 aa9.09□□□□□ -0.95
YCP4YCR004C POL12P38121 705 aaPredicted RBP9.09□□□□□ -0.95
YCP4YCR004C YBL036CP38197 257 aa9.09□□□□□ -0.95
YCP4YCR004C UBP5P39944 805 aa9.09□□□□□ -0.95
YCP4YCR004C PSP1P50896 841 aaKnown RBP9.09□□□□□ -0.95
YCP4YCR004C PIL1P53252 339 aaKnown RBP9.09□□□□□ -0.95
YCP4YCR004C YNR061CP53747 219 aa9.09□□□□□ -0.95
YCP4YCR004C SPE3Q12074 293 aaKnown RBP9.09□□□□□ -0.95
YCP4YCR004C CTF3Q12748 733 aa9.09□□□□□ -0.95
YCP4YCR004C DUG2P38149 878 aa9.08□□□□□ -0.96
YCP4YCR004C GYP8P43570 497 aa9.08□□□□□ -0.96
YCP4YCR004C POL31P46957 487 aa9.08□□□□□ -0.96
YCP4YCR004C RSM26P47141 266 aa9.08□□□□□ -0.96
YCP4YCR004C VPS25P47142 202 aa9.08□□□□□ -0.96
YCP4YCR004C CCM1P48237 864 aaPredicted RBP9.08□□□□□ -0.96
YCP4YCR004C ASN1P49089 572 aaKnown RBP9.08□□□□□ -0.96
YCP4YCR004C SEC5P89102 971 aa9.08□□□□□ -0.96
YCP4YCR004C TIF35Q04067 274 aaKnown RBP9.08□□□□□ -0.96
YCP4YCR004C UTP14Q04500 899 aaKnown RBP9.08□□□□□ -0.96
YCP4YCR004C CUR1Q06469 252 aa9.08□□□□□ -0.96
YCP4YCR004C TAF10Q12030 206 aa9.08□□□□□ -0.96
YCP4YCR004C WSC3Q12215 556 aa9.08□□□□□ -0.96
YCP4YCR004C PTC5Q12511 572 aa9.08□□□□□ -0.96
YCP4YCR004C TEL1P38110 2787 aa9.07□□□□□ -0.96
YCP4YCR004C CET1O13297 549 aaPredicted RBP9.07□□□□□ -0.96
YCP4YCR004C PCK1P10963 549 aa9.07□□□□□ -0.96
YCP4YCR004C SIR1P21691 654 aa9.07□□□□□ -0.96
YCP4YCR004C TBS1P38114 1094 aa9.07□□□□□ -0.96
YCP4YCR004C PPS1P38148 807 aa9.07□□□□□ -0.96
YCP4YCR004C RFC5P38251 354 aa9.07□□□□□ -0.96
YCP4YCR004C YHR054CP38780 354 aa9.07□□□□□ -0.96
YCP4YCR004C NMD3P38861 518 aaKnown RBP9.07□□□□□ -0.96
YCP4YCR004C NOP13P53883 403 aaKnown RBP RIP-Chip data9.07□□□□□ -0.96not detected
YCP4YCR004C NIS1P53939 407 aa9.07□□□□□ -0.96
YCP4YCR004C IMP4P53941 290 aaKnown RBP9.07□□□□□ -0.96
YCP4YCR004C SNU56Q03782 492 aaKnown RBP9.07□□□□□ -0.96
YCP4YCR004C HRT3Q12347 344 aa9.07□□□□□ -0.96
YCP4YCR004C MSB2P32334 1306 aa9.06□□□□□ -0.96
YCP4YCR004C ASP3-2P0CX77 362 aa9.06□□□□□ -0.96
YCP4YCR004C ASP3-3P0CX78 362 aa9.06□□□□□ -0.96
YCP4YCR004C ASP3-4P0CX79 362 aa9.06□□□□□ -0.96
YCP4YCR004C ASP3-1P0CZ17 362 aa9.06□□□□□ -0.96
YCP4YCR004C SFB3P38810 929 aa9.06□□□□□ -0.96
YCP4YCR004C FAR11P53917 953 aa9.06□□□□□ -0.96
YCP4YCR004C YPR084WQ06821 456 aa9.06□□□□□ -0.96
YCP4YCR004C MRM1P25270 412 aa9.05□□□□□ -0.96
YCP4YCR004C MSH2P25847 964 aa9.05□□□□□ -0.96
YCP4YCR004C SLA2P33338 968 aa9.05□□□□□ -0.96
YCP4YCR004C NEM1P38757 446 aa9.05□□□□□ -0.96
YCP4YCR004C BIM1P40013 344 aa9.05□□□□□ -0.96
YCP4YCR004C IES1P43579 692 aa9.05□□□□□ -0.96
YCP4YCR004C UTP8P53276 713 aaKnown RBP9.05□□□□□ -0.96
YCP4YCR004C CDD1Q06549 142 aa9.05□□□□□ -0.96
YCP4YCR004C ELG1Q12050 791 aa9.05□□□□□ -0.96
YCP4YCR004C SGT2Q12118 346 aaKnown RBP9.05□□□□□ -0.96
YCP4YCR004C MPD2Q99316 277 aa9.05□□□□□ -0.96
YCP4YCR004C RPL19AP0CX82 189 aaKnown RBP9.04□□□□□ -0.96
YCP4YCR004C RPL19BP0CX83 189 aaPredicted RBP9.04□□□□□ -0.96
YCP4YCR004C PHO8P11491 566 aa9.04□□□□□ -0.96
YCP4YCR004C ISY1P21374 235 aaPredicted RBP9.04□□□□□ -0.96
YCP4YCR004C STE11P23561 717 aa9.04□□□□□ -0.96
YCP4YCR004C TIF11P38912 153 aaKnown RBP9.04□□□□□ -0.96
YCP4YCR004C BTT1P40314 149 aaPredicted RBP9.04□□□□□ -0.96
YCP4YCR004C THI6P41835 540 aa9.04□□□□□ -0.96
Retrieved 100 of 5,963 RNA–protein pairs in 26.7 ms