RNA–Protein interactions for RNA: YBR275C

RIF1, Transcript of Protein that binds to the Rap1p C-terminus, yeastyeast

Gene RIF1, Length 5,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RIF1YBR275C TIF4631P39935 952 aaKnown RBP3.06□□□□□ -1.92
RIF1YBR275C VPS75P53853 264 aa3.06□□□□□ -1.92
RIF1YBR275C PRP38Q00723 242 aaPredicted RBP3.06□□□□□ -1.92
RIF1YBR275C ARX1Q03862 593 aaKnown RBP3.06□□□□□ -1.92
RIF1YBR275C LCB5Q06147 687 aaKnown RBP3.06□□□□□ -1.92
RIF1YBR275C MLC2Q06580 163 aa3.06□□□□□ -1.92
RIF1YBR275C YVC1Q12324 675 aa3.06□□□□□ -1.92
RIF1YBR275C KCS1Q12494 1050 aa3.06□□□□□ -1.92
RIF1YBR275C NHA1Q99271 985 aa3.06□□□□□ -1.92
RIF1YBR275C ADR1P07248 1323 aa3.06□□□□□ -1.92
RIF1YBR275C HXK2P04807 486 aaKnown RBP3.06□□□□□ -1.92
RIF1YBR275C RAD18P10862 487 aa3.06□□□□□ -1.92
RIF1YBR275C SIR1P21691 654 aa3.06□□□□□ -1.92
RIF1YBR275C PER1P25625 357 aa3.06□□□□□ -1.92
RIF1YBR275C RAM2P29703 316 aa3.06□□□□□ -1.92
RIF1YBR275C CYS3P31373 394 aaKnown RBP3.06□□□□□ -1.92
RIF1YBR275C DEF1P35732 738 aaKnown RBP3.06□□□□□ -1.92
RIF1YBR275C CCZ1P38273 704 aa3.06□□□□□ -1.92
RIF1YBR275C LIN1P38852 340 aaPredicted RBP3.06□□□□□ -1.92
RIF1YBR275C STT3P39007 718 aaKnown RBP3.06□□□□□ -1.92
RIF1YBR275C ALA1P40825 983 aaKnown RBP3.06□□□□□ -1.92
RIF1YBR275C CHS6P40955 746 aa3.06□□□□□ -1.92
RIF1YBR275C IES1P43579 692 aa3.06□□□□□ -1.92
RIF1YBR275C KTR5P53966 522 aaPredicted RBP3.06□□□□□ -1.92
RIF1YBR275C AIM32Q04689 311 aa3.06□□□□□ -1.92
RIF1YBR275C CBC2Q08920 208 aaKnown RBP RIP-Chip data3.06□□□□□ -1.92not detected
RIF1YBR275C YDL206WQ12424 762 aa3.06□□□□□ -1.92
RIF1YBR275C PUF4P25339 888 aaKnown RBP RIP-Chip data3.05□□□□□ -1.92not detected
RIF1YBR275C BEM3P32873 1128 aa3.05□□□□□ -1.92
RIF1YBR275C TGL3P40308 642 aa3.05□□□□□ -1.92
RIF1YBR275C KOG1P38873 1557 aa3.05□□□□□ -1.92
RIF1YBR275C COX3P00420 269 aa3.05□□□□□ -1.92
RIF1YBR275C RPL11AP0C0W9 174 aaKnown RBP3.05□□□□□ -1.92
RIF1YBR275C POL3P15436 1097 aa3.05□□□□□ -1.92
RIF1YBR275C SPT23P35210 1082 aa3.05□□□□□ -1.92
RIF1YBR275C BOI1P38041 980 aaKnown RBP3.05□□□□□ -1.92
RIF1YBR275C YHR078WP38799 552 aa3.05□□□□□ -1.92
RIF1YBR275C VAC8P39968 578 aa3.05□□□□□ -1.92
RIF1YBR275C EAF5P39995 279 aa3.05□□□□□ -1.92
RIF1YBR275C RLP7P40693 322 aaKnown RBP3.05□□□□□ -1.92
RIF1YBR275C MZM1Q03429 123 aaPredicted RBP3.05□□□□□ -1.92
RIF1YBR275C YDR239CQ03780 787 aa3.05□□□□□ -1.92
RIF1YBR275C SLK19Q08581 821 aaKnown RBP3.05□□□□□ -1.92
RIF1YBR275C GRE2Q12068 342 aaKnown RBP3.05□□□□□ -1.92
RIF1YBR275C RPL11BQ3E757 174 aaPredicted RBP3.05□□□□□ -1.92
RIF1YBR275C SWR1Q05471 1514 aa3.05□□□□□ -1.92
RIF1YBR275C HOM2P13663 365 aaKnown RBP3.05□□□□□ -1.92
RIF1YBR275C HCA4P20448 770 aaKnown RBP3.05□□□□□ -1.92
RIF1YBR275C CAD1P24813 409 aaKnown RBP3.05□□□□□ -1.92
RIF1YBR275C MKS1P34072 584 aa3.05□□□□□ -1.92
RIF1YBR275C APE3P37302 537 aaKnown RBP3.05□□□□□ -1.92
RIF1YBR275C PEX28P38848 579 aa3.05□□□□□ -1.92
RIF1YBR275C BEM4P39011 633 aa3.05□□□□□ -1.92
RIF1YBR275C NOP16P40007 231 aaKnown RBP3.05□□□□□ -1.92
RIF1YBR275C YMR147WP40218 223 aaKnown RBP3.05□□□□□ -1.92
RIF1YBR275C UFE1P41834 346 aa3.05□□□□□ -1.92
RIF1YBR275C TRM9P49957 279 aa3.05□□□□□ -1.92
RIF1YBR275C HFM1P51979 1187 aa3.05□□□□□ -1.92
RIF1YBR275C ORC4P54791 529 aa3.05□□□□□ -1.92
RIF1YBR275C YDR514CQ04408 483 aa3.05□□□□□ -1.92
RIF1YBR275C MRX10Q05648 414 aa3.05□□□□□ -1.92
RIF1YBR275C MCM21Q06675 368 aa3.05□□□□□ -1.92
RIF1YBR275C ABP140Q08641 628 aaKnown RBP3.05□□□□□ -1.92
RIF1YBR275C COBP00163 385 aa3.05□□□□□ -1.92
RIF1YBR275C PDC1P06169 563 aaKnown RBP3.05□□□□□ -1.92
RIF1YBR275C NMT1P14743 455 aa3.05□□□□□ -1.92
RIF1YBR275C RAD23P32628 398 aaKnown RBP3.05□□□□□ -1.92
RIF1YBR275C MRS6P32864 603 aaKnown RBP3.05□□□□□ -1.92
RIF1YBR275C SPC42P36094 363 aa3.05□□□□□ -1.92
RIF1YBR275C DRE2P36152 348 aa3.05□□□□□ -1.92
RIF1YBR275C MOB1P40484 314 aa3.05□□□□□ -1.92
RIF1YBR275C EMP47P43555 445 aa3.05□□□□□ -1.92
RIF1YBR275C BNA3P47039 444 aaKnown RBP3.05□□□□□ -1.92
RIF1YBR275C CCE1Q03702 353 aa3.05□□□□□ -1.92
RIF1YBR275C YDL124WQ07551 312 aaKnown RBP3.05□□□□□ -1.92
RIF1YBR275C AAD4Q07747 329 aa3.05□□□□□ -1.92
RIF1YBR275C CSR2Q12734 1121 aa3.05□□□□□ -1.92
RIF1YBR275C IFM1P25038 676 aa3.04□□□□□ -1.92
RIF1YBR275C MSH3P25336 1018 aa3.04□□□□□ -1.92
RIF1YBR275C KRR1P25586 316 aaPredicted RBP3.04□□□□□ -1.92
RIF1YBR275C KIP1P28742 1111 aa3.04□□□□□ -1.92
RIF1YBR275C RPT3P33298 428 aaKnown RBP3.04□□□□□ -1.92
RIF1YBR275C ARB1P40024 610 aaKnown RBP3.04□□□□□ -1.92
RIF1YBR275C IML2P47031 731 aa3.04□□□□□ -1.92
RIF1YBR275C YJL016WP47072 561 aa3.04□□□□□ -1.92
RIF1YBR275C YJL007CP47080 104 aa3.04□□□□□ -1.92
RIF1YBR275C CSL4P53859 292 aaPredicted RBP3.04□□□□□ -1.92
RIF1YBR275C HEF3P53978 1044 aaKnown RBP3.04□□□□□ -1.92
RIF1YBR275C NUP53Q03790 475 aa3.04□□□□□ -1.92
RIF1YBR275C YPR091CQ06833 770 aa3.04□□□□□ -1.92
RIF1YBR275C SRL2Q12020 392 aa3.04□□□□□ -1.92
RIF1YBR275C RAD4P14736 754 aa3.04□□□□□ -1.92
RIF1YBR275C ERP5P38819 212 aa3.04□□□□□ -1.92
RIF1YBR275C MAM1P40065 302 aa3.04□□□□□ -1.92
RIF1YBR275C RIC1P40395 1056 aa3.04□□□□□ -1.92
RIF1YBR275C TOF1P53840 1238 aa3.04□□□□□ -1.92
RIF1YBR275C HPT1Q04178 221 aaKnown RBP3.04□□□□□ -1.92
RIF1YBR275C HAT1Q12341 374 aa3.04□□□□□ -1.92
RIF1YBR275C MPH3P0CE00 602 aa3.04□□□□□ -1.92
RIF1YBR275C SNT1P25357 1226 aa3.04□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 49.3 ms