RNA–Protein interactions for RNA: YBR095C

RXT2, Transcript of Component of the histone deacetylase Rpd3L complex, yeast

Gene RXT2, Length 1,293 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RXT2	YBR095C	CTF13	P35203	478 aa		4.7	□□□□□ -1.66
RXT2	YBR095C	NPP2	P39997	493 aa		4.7	□□□□□ -1.66
RXT2	YBR095C	CHZ1	P40019	153 aa	Predicted RBP	4.7	□□□□□ -1.66
RXT2	YBR095C	ELO3	P40319	345 aa		4.7	□□□□□ -1.66
RXT2	YBR095C	RAI1	P53063	387 aa	Known RBP	4.7	□□□□□ -1.66
RXT2	YBR095C	THI7	Q05998	598 aa		4.7	□□□□□ -1.66
RXT2	YBR095C	AFR1	P33304	620 aa		4.69	□□□□□ -1.66
RXT2	YBR095C	REC104	P33323	182 aa		4.69	□□□□□ -1.66
RXT2	YBR095C	PET10	P36139	283 aa		4.69	□□□□□ -1.66
RXT2	YBR095C	TSL1	P38427	1098 aa	Known RBP	4.69	□□□□□ -1.66
RXT2	YBR095C	TOK1	P40310	691 aa		4.69	□□□□□ -1.66
RXT2	YBR095C	OSW7	P43611	510 aa		4.69	□□□□□ -1.66
RXT2	YBR095C	CCM1	P48237	864 aa	Predicted RBP	4.69	□□□□□ -1.66
RXT2	YBR095C	TRM11	Q12463	433 aa		4.69	□□□□□ -1.66
RXT2	YBR095C	BET3	P36149	193 aa		4.68	□□□□□ -1.66
RXT2	YBR095C	YKR078W	P36158	585 aa	Known RBP	4.68	□□□□□ -1.66
RXT2	YBR095C	RTA1	P53047	317 aa		4.68	□□□□□ -1.66
RXT2	YBR095C	CIT2	P08679	460 aa		4.67	□□□□□ -1.66
RXT2	YBR095C	ERR1	P0CX10	437 aa		4.67	□□□□□ -1.66
RXT2	YBR095C	ERR2	P0CX11	437 aa		4.67	□□□□□ -1.66
RXT2	YBR095C	RFA1	P22336	621 aa	Known RBP	4.67	□□□□□ -1.66
RXT2	YBR095C	SEC21	P32074	935 aa	Known RBP	4.67	□□□□□ -1.66
RXT2	YBR095C	TIM23	P32897	222 aa		4.67	□□□□□ -1.66
RXT2	YBR095C	NUP82	P40368	713 aa		4.67	□□□□□ -1.66
RXT2	YBR095C	BUD6	P41697	788 aa		4.67	□□□□□ -1.66
RXT2	YBR095C	UBP6	P43593	499 aa	Known RBP	4.67	□□□□□ -1.66
RXT2	YBR095C	FPR4	Q06205	392 aa	Predicted RBP	4.67	□□□□□ -1.66
RXT2	YBR095C	MET6	P05694	767 aa	Known RBP	4.66	□□□□□ -1.66
RXT2	YBR095C	CAF20	P12962	161 aa	Known RBP	4.66	□□□□□ -1.66
RXT2	YBR095C	ADY2	P25613	283 aa		4.66	□□□□□ -1.66
RXT2	YBR095C	BUL2	Q03758	920 aa	Known RBP	4.66	□□□□□ -1.66
RXT2	YBR095C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.65	□□□□□ -1.67	not detected
RXT2	YBR095C	NOT3	P06102	836 aa	Known RBP	4.65	□□□□□ -1.67
RXT2	YBR095C	KIN3	P22209	435 aa		4.65	□□□□□ -1.67
RXT2	YBR095C	PPG1	P32838	368 aa		4.65	□□□□□ -1.67
RXT2	YBR095C	PHO8	P11491	566 aa		4.64	□□□□□ -1.67
RXT2	YBR095C	YUR1	P26725	428 aa		4.64	□□□□□ -1.67
RXT2	YBR095C	CEP3	P40969	608 aa		4.64	□□□□□ -1.67
RXT2	YBR095C	NIT3	P49954	291 aa		4.64	□□□□□ -1.67
RXT2	YBR095C	HSV2	P50079	448 aa	Predicted RBP	4.64	□□□□□ -1.67
RXT2	YBR095C	YKE2	P52553	114 aa		4.64	□□□□□ -1.67
RXT2	YBR095C	RNH70	P53331	553 aa		4.64	□□□□□ -1.67
RXT2	YBR095C	RIA1	P53893	1110 aa		4.64	□□□□□ -1.67
RXT2	YBR095C	VPS30	Q02948	557 aa		4.64	□□□□□ -1.67
RXT2	YBR095C	FBP1	P09201	348 aa		4.63	□□□□□ -1.67
RXT2	YBR095C	THI4	P32318	326 aa		4.63	□□□□□ -1.67
RXT2	YBR095C	ALG2	P43636	503 aa		4.63	□□□□□ -1.67
RXT2	YBR095C	SCS3	P53012	380 aa		4.63	□□□□□ -1.67
RXT2	YBR095C	ORC1	P54784	914 aa	Predicted RBP	4.63	□□□□□ -1.67
RXT2	YBR095C	YLR125W	Q12138	136 aa		4.63	□□□□□ -1.67
RXT2	YBR095C	RPS9A	O13516	197 aa	Known RBP	4.62	□□□□□ -1.67
RXT2	YBR095C	YBR238C	P38330	731 aa	Known RBP	4.62	□□□□□ -1.67
RXT2	YBR095C	PCL5	P38794	229 aa		4.62	□□□□□ -1.67
RXT2	YBR095C	SDP1	P40479	209 aa		4.62	□□□□□ -1.67
RXT2	YBR095C	MPH2	P0CD99	609 aa		4.61	□□□□□ -1.67
RXT2	YBR095C	DMC1	P25453	334 aa		4.61	□□□□□ -1.67
RXT2	YBR095C	RPD3	P32561	433 aa		4.61	□□□□□ -1.67
RXT2	YBR095C	STE13	P33894	931 aa		4.61	□□□□□ -1.67
RXT2	YBR095C	GDH3	P39708	457 aa		4.61	□□□□□ -1.67
RXT2	YBR095C	ENV7	Q12003	364 aa		4.61	□□□□□ -1.67
RXT2	YBR095C	YIL108W	P40483	696 aa	Known RBP	4.6	□□□□□ -1.67
RXT2	YBR095C	GYP8	P43570	497 aa		4.6	□□□□□ -1.67
RXT2	YBR095C	DAM1	P53267	343 aa		4.6	□□□□□ -1.67
RXT2	YBR095C	YDR514C	Q04408	483 aa		4.6	□□□□□ -1.67
RXT2	YBR095C	SSL1	Q04673	461 aa	Predicted RBP	4.6	□□□□□ -1.67
RXT2	YBR095C	SWM1	Q12379	170 aa		4.6	□□□□□ -1.67
RXT2	YBR095C	DAL7	P21826	554 aa		4.59	□□□□□ -1.67
RXT2	YBR095C	URA1	P28272	314 aa	Predicted RBP	4.59	□□□□□ -1.67
RXT2	YBR095C	CYS3	P31373	394 aa	Known RBP	4.59	□□□□□ -1.67
RXT2	YBR095C	TYE7	P33122	291 aa	Predicted RBP	4.59	□□□□□ -1.67
RXT2	YBR095C	YJL163C	P46996	555 aa		4.59	□□□□□ -1.67
RXT2	YBR095C	MUP1	P50276	574 aa		4.59	□□□□□ -1.67
RXT2	YBR095C	PUS2	P53167	370 aa		4.59	□□□□□ -1.67
RXT2	YBR095C	YGR283C	P53336	341 aa	Predicted RBP	4.59	□□□□□ -1.67
RXT2	YBR095C	APM1	Q00776	475 aa	Predicted RBP	4.59	□□□□□ -1.67
RXT2	YBR095C	CRR1	Q05790	422 aa		4.59	□□□□□ -1.67
RXT2	YBR095C	TUB3	P09734	445 aa	Known RBP	4.58	□□□□□ -1.68
RXT2	YBR095C	EMC3	P36039	253 aa		4.58	□□□□□ -1.68
RXT2	YBR095C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
RXT2	YBR095C	NOG2	P53742	486 aa	Known RBP	4.58	□□□□□ -1.68
RXT2	YBR095C	HDA1	P53973	706 aa		4.58	□□□□□ -1.68
RXT2	YBR095C	YKR011C	Q02209	353 aa		4.58	□□□□□ -1.68
RXT2	YBR095C	SPC29	P33419	253 aa		4.57	□□□□□ -1.68
RXT2	YBR095C	SAP190	P36123	1033 aa		4.57	□□□□□ -1.68
RXT2	YBR095C	CTF8	P38877	133 aa		4.57	□□□□□ -1.68
RXT2	YBR095C	DSS1	P39112	969 aa		4.57	□□□□□ -1.68
RXT2	YBR095C	AMA1	P50082	593 aa		4.57	□□□□□ -1.68
RXT2	YBR095C	TAD1	P53065	400 aa		4.57	□□□□□ -1.68
RXT2	YBR095C	ALG12	P53730	551 aa		4.57	□□□□□ -1.68
RXT2	YBR095C	POB3	Q04636	552 aa	Known RBP	4.57	□□□□□ -1.68
RXT2	YBR095C	MRI1	Q06489	411 aa	Known RBP	4.57	□□□□□ -1.68
RXT2	YBR095C	MET7	Q08645	548 aa		4.57	□□□□□ -1.68
RXT2	YBR095C	PER1	P25625	357 aa		4.56	□□□□□ -1.68
RXT2	YBR095C	ORC2	P32833	620 aa		4.56	□□□□□ -1.68
RXT2	YBR095C	YBR053C	P38235	358 aa		4.56	□□□□□ -1.68
RXT2	YBR095C	NMD2	P38798	1089 aa	Known RBP	4.56	□□□□□ -1.68
RXT2	YBR095C	MAL11	P53048	616 aa		4.56	□□□□□ -1.68
RXT2	YBR095C	PRC1	P00729	532 aa		4.55	□□□□□ -1.68
RXT2	YBR095C	SPO11	P23179	398 aa		4.55	□□□□□ -1.68
RXT2	YBR095C	GSY1	P23337	708 aa		4.55	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 107.5 ms