RNA–Protein interactions for RNA: YBR028C

YPK3, Transcript of AGC kinase, yeast

Gene YPK3, Length 1,578 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPK3	YBR028C	UBC9	P50623	157 aa	Predicted RBP	5.99	□□□□□ -1.45
YPK3	YBR028C	PBP1	P53297	722 aa	Known RBP	5.99	□□□□□ -1.45
YPK3	YBR028C	GCN5	Q03330	439 aa		5.99	□□□□□ -1.45
YPK3	YBR028C	CRR1	Q05790	422 aa		5.99	□□□□□ -1.45
YPK3	YBR028C	GUD1	Q07729	489 aa		5.99	□□□□□ -1.45
YPK3	YBR028C	YOR352W	Q08816	343 aa		5.99	□□□□□ -1.45
YPK3	YBR028C	GPB1	Q08886	897 aa		5.99	□□□□□ -1.45
YPK3	YBR028C	UPC2	Q12151	913 aa		5.99	□□□□□ -1.45
YPK3	YBR028C	STE14	P32584	239 aa		5.98	□□□□□ -1.45
YPK3	YBR028C	GPP1	P41277	250 aa	Known RBP	5.98	□□□□□ -1.45
YPK3	YBR028C	GLT1	Q12680	2145 aa	Known RBP	5.98	□□□□□ -1.45
YPK3	YBR028C	HIS5	P07172	385 aa		5.97	□□□□□ -1.45
YPK3	YBR028C	CCR4	P31384	837 aa	Known RBP	5.97	□□□□□ -1.45
YPK3	YBR028C	YKR051W	P36142	418 aa		5.97	□□□□□ -1.45
YPK3	YBR028C	HSL7	P38274	827 aa		5.97	□□□□□ -1.45
YPK3	YBR028C	CHA4	P43634	648 aa		5.97	□□□□□ -1.45
YPK3	YBR028C	ZIP2	P53061	704 aa		5.97	□□□□□ -1.45
YPK3	YBR028C	FAP7	Q12055	197 aa	Predicted RBP	5.97	□□□□□ -1.45
YPK3	YBR028C	YLR149C	Q99296	730 aa		5.97	□□□□□ -1.45
YPK3	YBR028C	Q0142	Q9ZZW4	58 aa		5.97	□□□□□ -1.45
YPK3	YBR028C	TOM20	P35180	183 aa		5.97	□□□□□ -1.45
YPK3	YBR028C	CKB2	P38930	258 aa		5.97	□□□□□ -1.45
YPK3	YBR028C	YAP6	Q03935	383 aa		5.97	□□□□□ -1.45
YPK3	YBR028C	CDA2	Q06703	312 aa		5.97	□□□□□ -1.45
YPK3	YBR028C	PRP19	P32523	503 aa	Known RBP	5.96	□□□□□ -1.46
YPK3	YBR028C	PAF1	P38351	445 aa		5.96	□□□□□ -1.46
YPK3	YBR028C	DOT6	P40059	670 aa	Known RBP	5.96	□□□□□ -1.46
YPK3	YBR028C	NCS6	P53088	359 aa		5.96	□□□□□ -1.46
YPK3	YBR028C	NPY1	P53164	384 aa		5.96	□□□□□ -1.46
YPK3	YBR028C	RXT3	Q07458	294 aa		5.96	□□□□□ -1.46
YPK3	YBR028C	TMA17	Q12513	150 aa		5.96	□□□□□ -1.46
YPK3	YBR028C	CDC20	P26309	610 aa		5.95	□□□□□ -1.46
YPK3	YBR028C	YHR078W	P38799	552 aa		5.95	□□□□□ -1.46
YPK3	YBR028C	SSY5	P47002	699 aa		5.95	□□□□□ -1.46
YPK3	YBR028C	BNA2	P47125	453 aa		5.95	□□□□□ -1.46
YPK3	YBR028C	YPL277C	Q08989	487 aa		5.95	□□□□□ -1.46
YPK3	YBR028C	RPS13	P05756	151 aa	Known RBP	5.94	□□□□□ -1.46
YPK3	YBR028C	SED4	P25365	1065 aa		5.94	□□□□□ -1.46
YPK3	YBR028C	AIM3	P38266	947 aa	Known RBP	5.94	□□□□□ -1.46
YPK3	YBR028C	YJR120W	P47157	116 aa		5.94	□□□□□ -1.46
YPK3	YBR028C	HFD1	Q04458	532 aa		5.94	□□□□□ -1.46
YPK3	YBR028C	ACK1	Q07622	623 aa	Predicted RBP	5.94	□□□□□ -1.46
YPK3	YBR028C	NOP12	Q08208	459 aa	Known RBP	5.94	□□□□□ -1.46
YPK3	YBR028C	GPR1	Q12361	961 aa		5.94	□□□□□ -1.46
YPK3	YBR028C	GAS1	P22146	559 aa	Known RBP	5.93	□□□□□ -1.46
YPK3	YBR028C	FLR1	P38124	548 aa		5.93	□□□□□ -1.46
YPK3	YBR028C	YFL052W	P43551	465 aa		5.93	□□□□□ -1.46
YPK3	YBR028C	SPT20	P50875	604 aa		5.93	□□□□□ -1.46
YPK3	YBR028C	ASM4	Q05166	528 aa		5.93	□□□□□ -1.46
YPK3	YBR028C	RPN7	Q06103	429 aa	Known RBP	5.93	□□□□□ -1.46
YPK3	YBR028C	RPP2A	P05319	106 aa	Known RBP	5.93	□□□□□ -1.46
YPK3	YBR028C	FOL1	P53848	824 aa		5.93	□□□□□ -1.46
YPK3	YBR028C	SLU7	Q02775	382 aa	Known RBP	5.93	□□□□□ -1.46
YPK3	YBR028C	NPC2	Q12408	173 aa		5.93	□□□□□ -1.46
YPK3	YBR028C	SOD2	P00447	233 aa		5.92	□□□□□ -1.46
YPK3	YBR028C	TUB3	P09734	445 aa	Known RBP	5.92	□□□□□ -1.46
YPK3	YBR028C	PRP4	P20053	465 aa	Known RBP	5.92	□□□□□ -1.46
YPK3	YBR028C	SEC21	P32074	935 aa	Known RBP	5.92	□□□□□ -1.46
YPK3	YBR028C	YKR018C	P36114	725 aa		5.92	□□□□□ -1.46
YPK3	YBR028C	SAK1	P38990	1142 aa		5.92	□□□□□ -1.46
YPK3	YBR028C	MSS4	P38994	779 aa		5.92	□□□□□ -1.46
YPK3	YBR028C	KCS1	Q12494	1050 aa		5.92	□□□□□ -1.46
YPK3	YBR028C	MRC1	P25588	1096 aa		5.91	□□□□□ -1.46
YPK3	YBR028C	EUG1	P32474	517 aa		5.91	□□□□□ -1.46
YPK3	YBR028C	OAF1	P39720	1047 aa	Predicted RBP	5.91	□□□□□ -1.46
YPK3	YBR028C	ARP4	P80428	489 aa		5.91	□□□□□ -1.46
YPK3	YBR028C	MUS81	Q04149	632 aa	Predicted RBP	5.91	□□□□□ -1.46
YPK3	YBR028C	YLR224W	Q05947	369 aa		5.91	□□□□□ -1.46
YPK3	YBR028C	MNN4	P36044	1178 aa		5.9	□□□□□ -1.46
YPK3	YBR028C	PLB1	P39105	664 aa		5.9	□□□□□ -1.46
YPK3	YBR028C	PFA3	P42836	336 aa		5.9	□□□□□ -1.46
YPK3	YBR028C	GZF3	P42944	551 aa	Known RBP	5.9	□□□□□ -1.46
YPK3	YBR028C	RET2	P43621	546 aa		5.9	□□□□□ -1.46
YPK3	YBR028C	ASI2	P53895	289 aa		5.9	□□□□□ -1.46
YPK3	YBR028C	YTM1	Q12024	460 aa	Predicted RBP	5.9	□□□□□ -1.46
YPK3	YBR028C	DCS2	Q12123	353 aa		5.9	□□□□□ -1.46
YPK3	YBR028C	ENP1	P38333	483 aa	Known RBP	5.89	□□□□□ -1.47
YPK3	YBR028C	VHR1	P40522	640 aa		5.89	□□□□□ -1.47
YPK3	YBR028C	PCL10	P53124	433 aa		5.89	□□□□□ -1.47
YPK3	YBR028C	RIM8	P53179	542 aa		5.89	□□□□□ -1.47
YPK3	YBR028C	YBR071W	P38243	211 aa		5.89	□□□□□ -1.47
YPK3	YBR028C	TDA3	P38758	523 aa		5.89	□□□□□ -1.47
YPK3	YBR028C	PZF1	P39933	429 aa		5.89	□□□□□ -1.47
YPK3	YBR028C	CCT5	P40413	562 aa	Known RBP	5.89	□□□□□ -1.47
YPK3	YBR028C	YGR153W	P48238	217 aa		5.89	□□□□□ -1.47
YPK3	YBR028C	MTR3	P48240	250 aa	Predicted RBP	5.89	□□□□□ -1.47
YPK3	YBR028C	COG6	P53959	839 aa		5.89	□□□□□ -1.47
YPK3	YBR028C	ECM9	Q02202	377 aa		5.89	□□□□□ -1.47
YPK3	YBR028C	PRP6	P19735	899 aa	Predicted RBP	5.88	□□□□□ -1.47
YPK3	YBR028C	LST4	P34239	828 aa		5.88	□□□□□ -1.47
YPK3	YBR028C	MIP6	P38760	659 aa	Known RBP	5.88	□□□□□ -1.47
YPK3	YBR028C	PRP43	P53131	767 aa	Known RBP	5.88	□□□□□ -1.47
YPK3	YBR028C	RNQ1	P25367	405 aa		5.87	□□□□□ -1.47
YPK3	YBR028C	HXT6	P39003	570 aa	Known RBP	5.87	□□□□□ -1.47
YPK3	YBR028C	HXT7	P39004	570 aa		5.87	□□□□□ -1.47
YPK3	YBR028C	NIT1	P40447	199 aa		5.87	□□□□□ -1.47
YPK3	YBR028C	MNN11	P46985	422 aa	Known RBP	5.87	□□□□□ -1.47
YPK3	YBR028C	LEE1	Q02799	301 aa	Known RBP	5.87	□□□□□ -1.47
YPK3	YBR028C	SWM1	Q12379	170 aa		5.87	□□□□□ -1.47
YPK3	YBR028C	KAR4	P25583	335 aa		5.86	□□□□□ -1.47

Retrieved 100 of 5,963 RNA–protein pairs in 158 ms