RNA–Protein interactions for RNA: ENST00000641179.1

CASC19-216, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,140 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-216ENST00000641179 XPCQ01831 940 aaPredicted RBP10.65□□□□□ -0.7
CASC19-216ENST00000641179 PTSQ03393 145 aa10.65□□□□□ -0.7
CASC19-216ENST00000641179 NGEFQ8N5V2 710 aa10.65□□□□□ -0.7
CASC19-216ENST00000641179 GPR161Q8N6U8 529 aaKnown RBP10.65□□□□□ -0.7
CASC19-216ENST00000641179 OCSTAMPQ9BR26 566 aa10.65□□□□□ -0.7
CASC19-216ENST00000641179 SMG6Q86US8 1419 aaKnown RBP10.65□□□□□ -0.7
CASC19-216ENST00000641179 DIAPH1O60610 1272 aaKnown RBP10.64□□□□□ -0.71
CASC19-216ENST00000641179 AMPHP49418 695 aa10.64□□□□□ -0.71
CASC19-216ENST00000641179 KCNMA1Q12791 1236 aa10.64□□□□□ -0.71
CASC19-216ENST00000641179 CBLBQ13191 982 aa10.64□□□□□ -0.71
CASC19-216ENST00000641179 LRRN4Q8WUT4 740 aa10.64□□□□□ -0.71
CASC19-216ENST00000641179 DDX17Q92841 729 aaKnown RBP10.64□□□□□ -0.71
CASC19-216ENST00000641179 KCTD15Q96SI1 283 aaPredicted RBP10.64□□□□□ -0.71
CASC19-216ENST00000641179 ARHGAP9Q9BRR9 750 aa10.64□□□□□ -0.71
CASC19-216ENST00000641179 FLT4P35916 1363 aa10.64□□□□□ -0.71
CASC19-216ENST00000641179 USP54Q70EL1 1684 aa10.63□□□□□ -0.71
CASC19-216ENST00000641179 SPATA31A6Q5VVP1 1343 aa10.63□□□□□ -0.71
CASC19-216ENST00000641179 TNNT2P45379 298 aaPredicted RBP10.63□□□□□ -0.71
CASC19-216ENST00000641179 PPP2R2DQ66LE6 453 aa10.63□□□□□ -0.71
CASC19-216ENST00000641179 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.63□□□□□ -0.71
CASC19-216ENST00000641179 JCADQ9P266 1359 aa10.63□□□□□ -0.71
CASC19-216ENST00000641179 SLIT3O75094 1523 aa10.63□□□□□ -0.71
CASC19-216ENST00000641179 NHSL1Q5SYE7 1610 aa10.62□□□□□ -0.71
CASC19-216ENST00000641179 MAP3K19Q56UN5 1328 aa10.62□□□□□ -0.71
CASC19-216ENST00000641179 WDR43Q15061 677 aaKnown RBP eCLIP10.62□□□□□ -0.71
CASC19-216ENST00000641179 NUTM2GQ5VZR2 741 aa10.62□□□□□ -0.71
CASC19-216ENST00000641179 SLC10A4Q96EP9 437 aa10.62□□□□□ -0.71
CASC19-216ENST00000641179 MED1Q15648 1581 aaPredicted RBP10.61□□□□□ -0.71
CASC19-216ENST00000641179 BLMP54132 1417 aaPredicted RBP10.61□□□□□ -0.71
CASC19-216ENST00000641179 ROBO1Q9Y6N7 1651 aa10.61□□□□□ -0.71
CASC19-216ENST00000641179 HOXC9P31274 260 aa10.61□□□□□ -0.71
CASC19-216ENST00000641179 IL13P35225 146 aa10.61□□□□□ -0.71
CASC19-216ENST00000641179 DHX9Q08211 1270 aaKnown RBP10.61□□□□□ -0.71
CASC19-216ENST00000641179 CNGB1Q14028 1251 aaPredicted RBP10.61□□□□□ -0.71
CASC19-216ENST00000641179 SKIV2LQ15477 1246 aaKnown RBP10.61□□□□□ -0.71
CASC19-216ENST00000641179 GPSM3Q9Y4H4 160 aa10.61□□□□□ -0.71
CASC19-216ENST00000641179 ABCC6O95255 1503 aa10.61□□□□□ -0.71
CASC19-216ENST00000641179 RGPD8O14715 1765 aaPredicted RBP10.61□□□□□ -0.71
CASC19-216ENST00000641179 PLEKHG2Q9H7P9 1386 aa10.61□□□□□ -0.71
CASC19-216ENST00000641179 TRPM3Q9HCF6 1732 aaPredicted RBP10.61□□□□□ -0.71
CASC19-216ENST00000641179 CDK12Q9NYV4 1490 aaPredicted RBP10.61□□□□□ -0.71
CASC19-216ENST00000641179 SLC35F4A4IF30 521 aa10.6□□□□□ -0.71
CASC19-216ENST00000641179 PPM1GO15355 546 aaPredicted RBP10.6□□□□□ -0.71
CASC19-216ENST00000641179 SH3D19Q5HYK7 790 aa10.6□□□□□ -0.71
CASC19-216ENST00000641179 INTS6LQ5JSJ4 861 aaKnown RBP10.6□□□□□ -0.71
CASC19-216ENST00000641179 FBXO41Q8TF61 875 aa10.6□□□□□ -0.71
CASC19-216ENST00000641179 LOC100996750A0A140TA64 210 aa10.59□□□□□ -0.71
CASC19-216ENST00000641179 RRS1Q15050 365 aaKnown RBP10.59□□□□□ -0.71
CASC19-216ENST00000641179 NR6A1Q15406 480 aa10.59□□□□□ -0.71
CASC19-216ENST00000641179 CCDC155Q8N6L0 562 aa10.59□□□□□ -0.71
CASC19-216ENST00000641179 KRTAP4-6Q9BYQ5 205 aa10.59□□□□□ -0.71
CASC19-216ENST00000641179 PIK3C2AO00443 1686 aa10.59□□□□□ -0.71
CASC19-216ENST00000641179 ALS2Q96Q42 1657 aa10.59□□□□□ -0.71
CASC19-216ENST00000641179 ANKRD26Q9UPS8 1709 aa10.58□□□□□ -0.72
CASC19-216ENST00000641179 NEFMP07197 916 aa10.58□□□□□ -0.72
CASC19-216ENST00000641179 CCDC184Q52MB2 194 aa10.58□□□□□ -0.72
CASC19-216ENST00000641179 HSP90AB2PQ58FF8 381 aa10.58□□□□□ -0.72
CASC19-216ENST00000641179 PRDM11Q9NQV5 511 aa10.58□□□□□ -0.72
CASC19-216ENST00000641179 ADAMTS8Q9UP79 889 aa10.58□□□□□ -0.72
CASC19-216ENST00000641179 KIF20BQ96Q89 1820 aa10.57□□□□□ -0.72
CASC19-216ENST00000641179 FIGNL2A6NMB9 653 aa10.57□□□□□ -0.72
CASC19-216ENST00000641179 ZC3H6P61129 1189 aaKnown RBP10.57□□□□□ -0.72
CASC19-216ENST00000641179 EIF4A2Q14240 407 aaKnown RBP10.57□□□□□ -0.72
CASC19-216ENST00000641179 ZBTB33Q86T24 672 aa10.57□□□□□ -0.72
CASC19-216ENST00000641179 CNTNAP3BQ96NU0 1288 aa10.57□□□□□ -0.72
CASC19-216ENST00000641179 CNTNAP3Q9BZ76 1288 aa10.57□□□□□ -0.72
CASC19-216ENST00000641179 NFAT5O94916 1531 aa10.57□□□□□ -0.72
CASC19-216ENST00000641179 KIAA0232Q92628 1395 aa10.56□□□□□ -0.72
CASC19-216ENST00000641179 COL22A1Q8NFW1 1626 aaPredicted RBP10.56□□□□□ -0.72
CASC19-216ENST00000641179 U2AF1L5P0DN76 240 aaPredicted RBP10.56□□□□□ -0.72
CASC19-216ENST00000641179 FBLN1P23142 703 aa10.56□□□□□ -0.72
CASC19-216ENST00000641179 HSPA1LP34931 641 aa10.56□□□□□ -0.72
CASC19-216ENST00000641179 U2AF1Q01081 240 aaKnown RBP eCLIP10.56□□□□□ -0.721e-15■■■□□ 14.9
CASC19-216ENST00000641179 PTK2Q05397 1052 aa10.56□□□□□ -0.72
CASC19-216ENST00000641179 RUNDC1Q96C34 613 aa10.56□□□□□ -0.72
CASC19-216ENST00000641179 COL25A1Q9BXS0 654 aaPredicted RBP10.56□□□□□ -0.72
CASC19-216ENST00000641179 PHRF1Q9P1Y6 1649 aaKnown RBP10.55□□□□□ -0.72
CASC19-216ENST00000641179 FAM83GA6ND36 823 aa10.55□□□□□ -0.72
CASC19-216ENST00000641179 ITGA6P23229 1130 aa10.55□□□□□ -0.72
CASC19-216ENST00000641179 CTSOP43234 321 aaPredicted RBP10.55□□□□□ -0.72
CASC19-216ENST00000641179 FAM9BQ8IZU0 186 aa10.55□□□□□ -0.72
CASC19-216ENST00000641179 PROCA1Q8NCQ7 364 aaPredicted RBP10.55□□□□□ -0.72
CASC19-216ENST00000641179 ADAM32Q8TC27 787 aa10.55□□□□□ -0.72
CASC19-216ENST00000641179 IGSF1Q8N6C5 1336 aa10.55□□□□□ -0.72
CASC19-216ENST00000641179 COL16A1Q07092 1604 aaPredicted RBP10.55□□□□□ -0.72
CASC19-216ENST00000641179 U2SURPO15042 1029 aaKnown RBP10.54□□□□□ -0.72
CASC19-216ENST00000641179 SLURP2P0DP57 97 aa10.54□□□□□ -0.72
CASC19-216ENST00000641179 RNFT1Q5M7Z0 435 aa10.54□□□□□ -0.72
CASC19-216ENST00000641179 ANKRD24Q8TF21 1146 aa10.54□□□□□ -0.72
CASC19-216ENST00000641179 AGBL1Q96MI9 1066 aa10.54□□□□□ -0.72
CASC19-216ENST00000641179 COL3A1P02461 1466 aaPredicted RBP10.54□□□□□ -0.72
CASC19-216ENST00000641179 KDRP35968 1356 aa10.53□□□□□ -0.72
CASC19-216ENST00000641179 SENP3-EIF4A1A0A087X0R7 540 aa10.53□□□□□ -0.72
CASC19-216ENST00000641179 EVA1CP58658 441 aa10.53□□□□□ -0.72
CASC19-216ENST00000641179 CCDC27Q2M243 656 aa10.53□□□□□ -0.72
CASC19-216ENST00000641179 NBPF20Q3BBV1 942 aa10.53□□□□□ -0.72
CASC19-216ENST00000641179 AMOTQ4VCS5 1084 aa10.53□□□□□ -0.72
CASC19-216ENST00000641179 FNBP4Q8N3X1 1017 aaPredicted RBP10.53□□□□□ -0.72
CASC19-216ENST00000641179 RNF217Q8TC41 542 aa10.53□□□□□ -0.72
CASC19-216ENST00000641179 INSM2Q96T92 566 aaPredicted RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms