RNA–Protein interactions for RNA: ENST00000640413.1

AP3S1-209, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 5 BASIC

Gene AP3S1, Length 489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-209ENST00000640413 PCSK7Q16549 785 aa8.4□□□□□ -1.06
AP3S1-209ENST00000640413 CRTC2Q53ET0 693 aaPredicted RBP8.4□□□□□ -1.06
AP3S1-209ENST00000640413 HFE2Q6ZVN8 426 aa8.4□□□□□ -1.06
AP3S1-209ENST00000640413 DTWD1Q8N5C7 304 aa8.4□□□□□ -1.06
AP3S1-209ENST00000640413 TRPM4Q8TD43 1214 aa8.4□□□□□ -1.06
AP3S1-209ENST00000640413 MEGF10Q96KG7 1140 aa8.4□□□□□ -1.06
AP3S1-209ENST00000640413 RARAP10276 462 aa8.39□□□□□ -1.07
AP3S1-209ENST00000640413 IGFBP4P22692 258 aa8.39□□□□□ -1.07
AP3S1-209ENST00000640413 DGKZQ13574 1117 aa8.39□□□□□ -1.07
AP3S1-209ENST00000640413 LCE3BQ5TA77 95 aa8.39□□□□□ -1.07
AP3S1-209ENST00000640413 GLMNQ92990 594 aa8.39□□□□□ -1.07
AP3S1-209ENST00000640413 DEAF1O75398 565 aaPredicted RBP8.38□□□□□ -1.07
AP3S1-209ENST00000640413 PTK7Q13308 1070 aa8.38□□□□□ -1.07
AP3S1-209ENST00000640413 IGF2-ASQ6U949 168 aa8.38□□□□□ -1.07
AP3S1-209ENST00000640413 SMG9Q9H0W8 520 aaKnown RBP8.38□□□□□ -1.07
AP3S1-209ENST00000640413 USP20Q9Y2K6 914 aa8.38□□□□□ -1.07
AP3S1-209ENST00000640413 MICAL2O94851 1124 aa8.37□□□□□ -1.07
AP3S1-209ENST00000640413 ARSDP51689 593 aa8.37□□□□□ -1.07
AP3S1-209ENST00000640413 GPLD1P80108 840 aa8.37□□□□□ -1.07
AP3S1-209ENST00000640413 RNF112Q9ULX5 631 aa8.37□□□□□ -1.07
AP3S1-209ENST00000640413 KANK4Q5T7N3 995 aaPredicted RBP8.36□□□□□ -1.07
AP3S1-209ENST00000640413 TTC9Q92623 222 aa8.36□□□□□ -1.07
AP3S1-209ENST00000640413 CLUAP1Q96AJ1 413 aa8.36□□□□□ -1.07
AP3S1-209ENST00000640413 QTRT2Q9H974 415 aaKnown RBP8.36□□□□□ -1.07
AP3S1-209ENST00000640413 ALX3O95076 343 aa8.35□□□□□ -1.07
AP3S1-209ENST00000640413 PRKCSHP14314 528 aaPredicted RBP8.35□□□□□ -1.07
AP3S1-209ENST00000640413 PRR23CQ6ZRP0 262 aa8.35□□□□□ -1.07
AP3S1-209ENST00000640413 ANKMY2Q8IV38 441 aa8.35□□□□□ -1.07
AP3S1-209ENST00000640413 USP17L15C9J2P7 530 aa8.34□□□□□ -1.07
AP3S1-209ENST00000640413 USP17L10C9JJH3 530 aa8.34□□□□□ -1.07
AP3S1-209ENST00000640413 USP17L13C9JLJ4 530 aa8.34□□□□□ -1.07
AP3S1-209ENST00000640413 USP17L12C9JPN9 530 aa8.34□□□□□ -1.07
AP3S1-209ENST00000640413 USP17L11C9JVI0 530 aa8.34□□□□□ -1.07
AP3S1-209ENST00000640413 USP17L21D6R901 530 aa8.34□□□□□ -1.07
AP3S1-209ENST00000640413 USP17L18D6R9N7 530 aa8.34□□□□□ -1.07
AP3S1-209ENST00000640413 USP17L22D6RA61 530 aa8.34□□□□□ -1.07
AP3S1-209ENST00000640413 USP17L17D6RBQ6 530 aa8.34□□□□□ -1.07
AP3S1-209ENST00000640413 USP17L19D6RCP7 530 aa8.34□□□□□ -1.07
AP3S1-209ENST00000640413 USP17L20D6RJB6 530 aa8.34□□□□□ -1.07
AP3S1-209ENST00000640413 DLL1O00548 723 aa8.34□□□□□ -1.07
AP3S1-209ENST00000640413 EIF2AK2P19525 551 aaKnown RBP8.34□□□□□ -1.07
AP3S1-209ENST00000640413 USP17L24Q0WX57 530 aa8.34□□□□□ -1.07
AP3S1-209ENST00000640413 J3QW42 95 aa8.33□□□□□ -1.08
AP3S1-209ENST00000640413 OPLAHO14841 1288 aa8.33□□□□□ -1.08
AP3S1-209ENST00000640413 C11orf91Q3C1V1 193 aa8.33□□□□□ -1.08
AP3S1-209ENST00000640413 FNBP4Q8N3X1 1017 aaPredicted RBP8.33□□□□□ -1.08
AP3S1-209ENST00000640413 PPP1R12CQ9BZL4 782 aa8.33□□□□□ -1.08
AP3S1-209ENST00000640413 RTCBQ9Y3I0 505 aaKnown RBP8.33□□□□□ -1.08
AP3S1-209ENST00000640413 NRLP54845 237 aa8.32□□□□□ -1.08
AP3S1-209ENST00000640413 VTI1AQ96AJ9 217 aa8.32□□□□□ -1.08
AP3S1-209ENST00000640413 AKTIPQ9H8T0 292 aa8.32□□□□□ -1.08
AP3S1-209ENST00000640413 C11orf16Q9NQ32 467 aa8.32□□□□□ -1.08
AP3S1-209ENST00000640413 TLR7Q9NYK1 1049 aaKnown RBP8.32□□□□□ -1.08
AP3S1-209ENST00000640413 GDF6Q6KF10 455 aaPredicted RBP8.31□□□□□ -1.08
AP3S1-209ENST00000640413 PROSER2Q86WR7 435 aaPredicted RBP8.31□□□□□ -1.08
AP3S1-209ENST00000640413 DZIP1LQ8IYY4 767 aaKnown RBP8.31□□□□□ -1.08
AP3S1-209ENST00000640413 CMTR1Q8N1G2 835 aaKnown RBP8.31□□□□□ -1.08
AP3S1-209ENST00000640413 PLD4Q96BZ4 506 aa8.31□□□□□ -1.08
AP3S1-209ENST00000640413 VRTNQ9H8Y1 702 aa8.31□□□□□ -1.08
AP3S1-209ENST00000640413 LRFN2Q9ULH4 789 aa8.31□□□□□ -1.08
AP3S1-209ENST00000640413 FAM196BA6NMK8 535 aa8.3□□□□□ -1.08
AP3S1-209ENST00000640413 XYLBO75191 536 aa8.3□□□□□ -1.08
AP3S1-209ENST00000640413 FSTP19883 344 aa8.3□□□□□ -1.08
AP3S1-209ENST00000640413 ARID4AP29374 1257 aaPredicted RBP8.3□□□□□ -1.08
AP3S1-209ENST00000640413 WEE1P30291 646 aa8.3□□□□□ -1.08
AP3S1-209ENST00000640413 RGL4Q8IZJ4 473 aa8.3□□□□□ -1.08
AP3S1-209ENST00000640413 CALR3Q96L12 384 aaKnown RBP8.3□□□□□ -1.08
AP3S1-209ENST00000640413 ARXQ96QS3 562 aa8.3□□□□□ -1.08
AP3S1-209ENST00000640413 PCMTD2Q9NV79 361 aa8.3□□□□□ -1.08
AP3S1-209ENST00000640413 LOC102724428A0A0B4J2F2 783 aa8.29□□□□□ -1.08
AP3S1-209ENST00000640413 F8W735 103 aaPredicted RBP8.29□□□□□ -1.08
AP3S1-209ENST00000640413 FOXO3O43524 673 aa8.29□□□□□ -1.08
AP3S1-209ENST00000640413 LMOD1P29536 600 aaPredicted RBP8.29□□□□□ -1.08
AP3S1-209ENST00000640413 SSTR4P31391 388 aa8.29□□□□□ -1.08
AP3S1-209ENST00000640413 SIK1P57059 783 aa8.29□□□□□ -1.08
AP3S1-209ENST00000640413 IL22RA1Q8N6P7 574 aa8.29□□□□□ -1.08
AP3S1-209ENST00000640413 MYO19Q96H55 970 aa8.29□□□□□ -1.08
AP3S1-209ENST00000640413 NSUN5Q96P11 429 aaKnown RBP8.29□□□□□ -1.08
AP3S1-209ENST00000640413 MRPL18Q9H0U6 180 aaKnown RBP8.29□□□□□ -1.08
AP3S1-209ENST00000640413 MMP20O60882 483 aa8.28□□□□□ -1.08
AP3S1-209ENST00000640413 EGFRP00533 1210 aa8.28□□□□□ -1.08
AP3S1-209ENST00000640413 TREML1Q86YW5 311 aa8.28□□□□□ -1.08
AP3S1-209ENST00000640413 KRTAP19-1Q8IUB9 90 aa8.28□□□□□ -1.08
AP3S1-209ENST00000640413 GHRHP01286 108 aa8.27□□□□□ -1.09
AP3S1-209ENST00000640413 PSAPP07602 524 aa8.27□□□□□ -1.09
AP3S1-209ENST00000640413 MCTP1Q6DN14 999 aa8.27□□□□□ -1.09
AP3S1-209ENST00000640413 AGGF1Q8N302 714 aaeCLIP8.27□□□□□ -1.09
AP3S1-209ENST00000640413 TMEM130Q8N3G9 435 aa8.27□□□□□ -1.09
AP3S1-209ENST00000640413 KCNMB2Q9Y691 235 aa8.27□□□□□ -1.09
AP3S1-209ENST00000640413 SETDB1Q15047 1291 aa8.26□□□□□ -1.09
AP3S1-209ENST00000640413 TRIM33Q9UPN9 1127 aa8.26□□□□□ -1.09
AP3S1-209ENST00000640413 GLB1P16278 677 aa8.24□□□□□ -1.09
AP3S1-209ENST00000640413 COX20Q5RI15 118 aa8.24□□□□□ -1.09
AP3S1-209ENST00000640413 GOLGA2P5Q9HBQ8 144 aa8.24□□□□□ -1.09
AP3S1-209ENST00000640413 CDCA8Q53HL2 280 aa8.23□□□□□ -1.09
AP3S1-209ENST00000640413 FAM200AQ8TCP9 573 aa8.23□□□□□ -1.09
AP3S1-209ENST00000640413 KRTAP9-9Q9BYP9 154 aa8.23□□□□□ -1.09
AP3S1-209ENST00000640413 KRTAP9-4Q9BYQ2 154 aa8.23□□□□□ -1.09
AP3S1-209ENST00000640413 RBSNQ9H1K0 784 aa8.23□□□□□ -1.09
AP3S1-209ENST00000640413 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.23□□□□□ -1.094e-6■■■■■ 72.1
Retrieved 100 of 20,778 RNA–protein pairs in 171.8 ms