RNA–Protein interactions for RNA: ENST00000638394.1

PRICKLE2-205, Transcript of prickle planar cell polarity protein 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRICKLE2, Length 9,956 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE2-205ENST00000638394 RNF41Q9H4P4 317 aaPredicted RBP10.36□□□□□ -0.75
PRICKLE2-205ENST00000638394 JRKLQ9Y4A0 524 aa10.36□□□□□ -0.75
PRICKLE2-205ENST00000638394 LAMC3Q9Y6N6 1575 aa10.36□□□□□ -0.75
PRICKLE2-205ENST00000638394 SSH2Q76I76 1423 aa10.36□□□□□ -0.75
PRICKLE2-205ENST00000638394 RNF123Q5XPI4 1314 aa10.36□□□□□ -0.75
PRICKLE2-205ENST00000638394 HYPKQ9NX55 129 aa10.36□□□□□ -0.75
PRICKLE2-205ENST00000638394 RBM27Q9P2N5 1060 aaKnown RBP10.36□□□□□ -0.75
PRICKLE2-205ENST00000638394 GTF2E1P29083 439 aaPredicted RBP10.36□□□□□ -0.75
PRICKLE2-205ENST00000638394 SETDB1Q15047 1291 aa10.36□□□□□ -0.75
PRICKLE2-205ENST00000638394 RAB3IPQ96QF0 476 aaPredicted RBP10.36□□□□□ -0.75
PRICKLE2-205ENST00000638394 SLC52A1Q9NWF4 448 aa10.36□□□□□ -0.75
PRICKLE2-205ENST00000638394 UGGT2Q9NYU1 1516 aa10.36□□□□□ -0.75
PRICKLE2-205ENST00000638394 FAM177A1Q8N128 213 aaPredicted RBP10.36□□□□□ -0.75
PRICKLE2-205ENST00000638394 SH3GL3Q99963 347 aa10.36□□□□□ -0.75
PRICKLE2-205ENST00000638394 BCAR3O75815 825 aa10.35□□□□□ -0.75
PRICKLE2-205ENST00000638394 ZNF526Q8TF50 670 aaPredicted RBP10.35□□□□□ -0.75
PRICKLE2-205ENST00000638394 FERMT1Q9BQL6 677 aa10.35□□□□□ -0.75
PRICKLE2-205ENST00000638394 MCM6Q14566 821 aa10.35□□□□□ -0.75
PRICKLE2-205ENST00000638394 HSP90AA5PQ58FG0 334 aa10.35□□□□□ -0.75
PRICKLE2-205ENST00000638394 TRERF1Q96PN7 1200 aa10.35□□□□□ -0.75
PRICKLE2-205ENST00000638394 DNAI1Q9UI46 699 aa10.35□□□□□ -0.75
PRICKLE2-205ENST00000638394 SHANK2Q9UPX8 1470 aa10.35□□□□□ -0.75
PRICKLE2-205ENST00000638394 NBPF9Q3BBW0 867 aa10.35□□□□□ -0.75
PRICKLE2-205ENST00000638394 TTC22Q5TAA0 569 aa10.35□□□□□ -0.75
PRICKLE2-205ENST00000638394 MMS22LQ6ZRQ5 1243 aa10.35□□□□□ -0.75
PRICKLE2-205ENST00000638394 PUS7Q96PZ0 661 aaKnown RBP10.35□□□□□ -0.75
PRICKLE2-205ENST00000638394 RABGAP1Q9Y3P9 1069 aa10.35□□□□□ -0.75
PRICKLE2-205ENST00000638394 PPFIA4O75335 1185 aa10.35□□□□□ -0.75
PRICKLE2-205ENST00000638394 STXBP4Q6ZWJ1 553 aa10.35□□□□□ -0.75
PRICKLE2-205ENST00000638394 FAM71BQ8TC56 605 aa10.35□□□□□ -0.75
PRICKLE2-205ENST00000638394 CTNNBL1Q8WYA6 563 aaPredicted RBP10.35□□□□□ -0.75
PRICKLE2-205ENST00000638394 TSKSQ9UJT2 592 aa10.35□□□□□ -0.75
PRICKLE2-205ENST00000638394 SEPT2Q15019 361 aa10.35□□□□□ -0.75
PRICKLE2-205ENST00000638394 TMC6Q7Z403 805 aa10.35□□□□□ -0.75
PRICKLE2-205ENST00000638394 APBA1Q02410 837 aa10.35□□□□□ -0.75
PRICKLE2-205ENST00000638394 FBXW7Q969H0 707 aa10.35□□□□□ -0.75
PRICKLE2-205ENST00000638394 CEP85LQ5SZL2 805 aa10.35□□□□□ -0.75
PRICKLE2-205ENST00000638394 GFM2Q969S9 779 aaKnown RBP10.35□□□□□ -0.75
PRICKLE2-205ENST00000638394 PANK2Q9BZ23 570 aa10.35□□□□□ -0.75
PRICKLE2-205ENST00000638394 ITGB1BP2Q9UKP3 347 aa10.35□□□□□ -0.75
PRICKLE2-205ENST00000638394 SSFA2P28290 1259 aa10.35□□□□□ -0.75
PRICKLE2-205ENST00000638394 CABS1Q96KC9 395 aa10.35□□□□□ -0.75
PRICKLE2-205ENST00000638394 NCAPGQ9BPX3 1015 aa10.35□□□□□ -0.75
PRICKLE2-205ENST00000638394 PLEKHO1Q53GL0 409 aaPredicted RBP10.34□□□□□ -0.75
PRICKLE2-205ENST00000638394 RUFY4Q6ZNE9 571 aa10.34□□□□□ -0.75
PRICKLE2-205ENST00000638394 NSD3Q9BZ95 1437 aa10.34□□□□□ -0.75
PRICKLE2-205ENST00000638394 TTC21AQ8NDW8 1320 aa10.34□□□□□ -0.75
PRICKLE2-205ENST00000638394 A0A087WUV0 522 aaPredicted RBP10.34□□□□□ -0.75
PRICKLE2-205ENST00000638394 TMPOP42166 694 aaKnown RBP10.34□□□□□ -0.75
PRICKLE2-205ENST00000638394 MAGEA9P43362 315 aa10.34□□□□□ -0.75
PRICKLE2-205ENST00000638394 WWC2Q6AWC2 1192 aa10.34□□□□□ -0.75
PRICKLE2-205ENST00000638394 CNNM3Q8NE01 707 aa10.34□□□□□ -0.75
PRICKLE2-205ENST00000638394 PPP1R1BQ9UD71 204 aaPredicted RBP10.34□□□□□ -0.75
PRICKLE2-205ENST00000638394 ZFYVE9O95405 1425 aa10.34□□□□□ -0.75
PRICKLE2-205ENST00000638394 SKIDA1Q1XH10 827 aa10.34□□□□□ -0.75
PRICKLE2-205ENST00000638394 BRAPQ7Z569 592 aa10.34□□□□□ -0.75
PRICKLE2-205ENST00000638394 JPH4Q96JJ6 628 aa10.34□□□□□ -0.75
PRICKLE2-205ENST00000638394 CTDP1Q9Y5B0 961 aaPredicted RBP10.34□□□□□ -0.75
PRICKLE2-205ENST00000638394 RAPGEF6Q8TEU7 1601 aa10.34□□□□□ -0.75
PRICKLE2-205ENST00000638394 UBASH3AP57075 661 aa10.34□□□□□ -0.75
PRICKLE2-205ENST00000638394 ATP2A1O14983 1001 aa10.34□□□□□ -0.75
PRICKLE2-205ENST00000638394 RAI14Q9P0K7 980 aa10.34□□□□□ -0.75
PRICKLE2-205ENST00000638394 MCTP2Q6DN12 878 aa10.34□□□□□ -0.75
PRICKLE2-205ENST00000638394 CCHCR1Q8TD31 782 aa10.34□□□□□ -0.75
PRICKLE2-205ENST00000638394 UBAC1Q9BSL1 405 aa10.34□□□□□ -0.75
PRICKLE2-205ENST00000638394 P3H4Q92791 437 aa10.34□□□□□ -0.75
PRICKLE2-205ENST00000638394 TRIM4Q9C037 500 aa10.34□□□□□ -0.75
PRICKLE2-205ENST00000638394 TMEM57Q8N5G2 664 aa10.33□□□□□ -0.76
PRICKLE2-205ENST00000638394 LRRC45Q96CN5 670 aa10.33□□□□□ -0.76
PRICKLE2-205ENST00000638394 TTF2Q9UNY4 1162 aaKnown RBP10.33□□□□□ -0.76
PRICKLE2-205ENST00000638394 NDUFAB1O14561 156 aa10.33□□□□□ -0.76
PRICKLE2-205ENST00000638394 PRKAR2BP31323 418 aa10.33□□□□□ -0.76
PRICKLE2-205ENST00000638394 KIF24Q5T7B8 1368 aa10.33□□□□□ -0.76
PRICKLE2-205ENST00000638394 ELL2O00472 640 aaPredicted RBP10.33□□□□□ -0.76
PRICKLE2-205ENST00000638394 SLC20A2Q08357 652 aa10.33□□□□□ -0.76
PRICKLE2-205ENST00000638394 PLCB1Q9NQ66 1216 aa10.33□□□□□ -0.76
PRICKLE2-205ENST00000638394 TTC21BQ7Z4L5 1316 aa10.33□□□□□ -0.76
PRICKLE2-205ENST00000638394 FSIP1Q8NA03 581 aa10.33□□□□□ -0.76
PRICKLE2-205ENST00000638394 HLTFQ14527 1009 aaKnown RBP eCLIP10.33□□□□□ -0.76
PRICKLE2-205ENST00000638394 TMEM266Q2M3C6 531 aa10.33□□□□□ -0.76
PRICKLE2-205ENST00000638394 STMN2Q93045 179 aa10.33□□□□□ -0.76
PRICKLE2-205ENST00000638394 SMC6Q96SB8 1091 aa10.33□□□□□ -0.76
PRICKLE2-205ENST00000638394 TYRO3Q06418 890 aa10.33□□□□□ -0.76
PRICKLE2-205ENST00000638394 TMTC2Q8N394 836 aa10.33□□□□□ -0.76
PRICKLE2-205ENST00000638394 DUOX2Q9NRD8 1548 aa10.33□□□□□ -0.76
PRICKLE2-205ENST00000638394 GOLGA6CA6NDK9 693 aa10.33□□□□□ -0.76
PRICKLE2-205ENST00000638394 GOLGA6DP0CG33 693 aa10.33□□□□□ -0.76
PRICKLE2-205ENST00000638394 PCK1P35558 622 aa10.33□□□□□ -0.76
PRICKLE2-205ENST00000638394 AMOTQ4VCS5 1084 aa10.33□□□□□ -0.76
PRICKLE2-205ENST00000638394 CPLX4Q7Z7G2 160 aa10.33□□□□□ -0.76
PRICKLE2-205ENST00000638394 GOLGA6AQ9NYA3 693 aa10.33□□□□□ -0.76
PRICKLE2-205ENST00000638394 BLMP54132 1417 aaPredicted RBP10.32□□□□□ -0.76
PRICKLE2-205ENST00000638394 DYNC1I2Q13409 638 aaKnown RBP10.32□□□□□ -0.76
PRICKLE2-205ENST00000638394 SOGA3Q5TF21 947 aa10.32□□□□□ -0.76
PRICKLE2-205ENST00000638394 GDAP1L1Q96MZ0 367 aa10.32□□□□□ -0.76
PRICKLE2-205ENST00000638394 HCLS1P14317 486 aaPredicted RBP10.32□□□□□ -0.76
PRICKLE2-205ENST00000638394 LRRC23Q53EV4 343 aaPredicted RBP10.32□□□□□ -0.76
PRICKLE2-205ENST00000638394 NBPF3Q9H094 633 aa10.32□□□□□ -0.76
PRICKLE2-205ENST00000638394 BCAP29Q9UHQ4 241 aa10.32□□□□□ -0.76
PRICKLE2-205ENST00000638394 TNNC1P63316 161 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms