RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 KRT13P13646 458 aa21.95■■□□□ 1.1
CACNA1A-257ENST00000638009 NCBP1Q09161 790 aaKnown RBP21.95■■□□□ 1.1
CACNA1A-257ENST00000638009 ZNF710Q8N1W2 664 aa21.95■■□□□ 1.1
CACNA1A-257ENST00000638009 TRERF1Q96PN7 1200 aa21.95■■□□□ 1.1
CACNA1A-257ENST00000638009 HNRNPMP52272 730 aaKnown RBP eCLIP21.95■■□□□ 1.1
CACNA1A-257ENST00000638009 PPFIA1Q13136 1202 aa21.95■■□□□ 1.1
CACNA1A-257ENST00000638009 BACH2Q9BYV9 841 aa21.95■■□□□ 1.1
CACNA1A-257ENST00000638009 THEGQ9P2T0 379 aa21.95■■□□□ 1.1
CACNA1A-257ENST00000638009 HDXQ7Z353 690 aa21.95■■□□□ 1.1
CACNA1A-257ENST00000638009 CAVIN4Q5BKX8 364 aa21.94■■□□□ 1.1
CACNA1A-257ENST00000638009 TWISTNBQ3B726 338 aaPredicted RBP21.94■■□□□ 1.1
CACNA1A-257ENST00000638009 DDX27Q96GQ7 796 aaKnown RBP21.94■■□□□ 1.1
CACNA1A-257ENST00000638009 PDZRN3Q9UPQ7 1066 aa21.94■■□□□ 1.1
CACNA1A-257ENST00000638009 UBA7P41226 1012 aa21.94■■□□□ 1.1
CACNA1A-257ENST00000638009 INF2Q27J81 1249 aa21.94■■□□□ 1.1
CACNA1A-257ENST00000638009 CROCCQ5TZA2 2017 aa21.94■■□□□ 1.1
CACNA1A-257ENST00000638009 TBCAO75347 108 aaKnown RBP21.94■■□□□ 1.1
CACNA1A-257ENST00000638009 ADCY5O95622 1261 aa21.94■■□□□ 1.1
CACNA1A-257ENST00000638009 MAK16Q9BXY0 300 aaKnown RBP21.93■■□□□ 1.1
CACNA1A-257ENST00000638009 CALCOCO2Q13137 446 aa21.93■■□□□ 1.1
CACNA1A-257ENST00000638009 CRACR2BQ8N4Y2 399 aaPredicted RBP21.93■■□□□ 1.1
CACNA1A-257ENST00000638009 ZNF354CQ86Y25 554 aa21.93■■□□□ 1.1
CACNA1A-257ENST00000638009 TRMT1Q9NXH9 659 aaKnown RBP21.93■■□□□ 1.1
CACNA1A-257ENST00000638009 CUL4BQ13620 913 aa21.93■■□□□ 1.1
CACNA1A-257ENST00000638009 CCDC117Q8IWD4 279 aaPredicted RBP21.93■■□□□ 1.1
CACNA1A-257ENST00000638009 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.93■■□□□ 1.1
CACNA1A-257ENST00000638009 MYO1BO43795 1136 aa21.93■■□□□ 1.1
CACNA1A-257ENST00000638009 Q9H521 79 aa21.93■■□□□ 1.1
CACNA1A-257ENST00000638009 FAM169AQ9Y6X4 670 aa21.92■■□□□ 1.1
CACNA1A-257ENST00000638009 GOLGA8AA7E2F4 631 aa21.92■■□□□ 1.1
CACNA1A-257ENST00000638009 GOLGA8BA8MQT2 603 aa21.92■■□□□ 1.1
CACNA1A-257ENST00000638009 ATP2C2O75185 946 aa21.92■■□□□ 1.1
CACNA1A-257ENST00000638009 PDE1CQ14123 709 aaPredicted RBP21.92■■□□□ 1.1
CACNA1A-257ENST00000638009 PDCD2Q16342 344 aaPredicted RBP21.91■■□□□ 1.1
CACNA1A-257ENST00000638009 MCUR1Q96AQ8 359 aa21.91■■□□□ 1.1
CACNA1A-257ENST00000638009 CAPZA3Q96KX2 299 aa21.91■■□□□ 1.1
CACNA1A-257ENST00000638009 PDS5BQ9NTI5 1447 aa21.91■■□□□ 1.1
CACNA1A-257ENST00000638009 ANKRD12Q6UB98 2062 aa21.91■■□□□ 1.1
CACNA1A-257ENST00000638009 MPNDQ8N594 471 aa21.91■■□□□ 1.1
CACNA1A-257ENST00000638009 CCDC26Q8TAB7 109 aa21.91■■□□□ 1.1
CACNA1A-257ENST00000638009 ERCC3P19447 782 aa21.9■■□□□ 1.1
CACNA1A-257ENST00000638009 KIF1BPQ96EK5 621 aa21.9■■□□□ 1.1
CACNA1A-257ENST00000638009 ZNF165P49910 485 aa21.9■■□□□ 1.1
CACNA1A-257ENST00000638009 RILPL1Q5EBL4 403 aa21.9■■□□□ 1.1
CACNA1A-257ENST00000638009 FAN1Q9Y2M0 1017 aa21.9■■□□□ 1.1
CACNA1A-257ENST00000638009 CCDC102BQ68D86 513 aa21.9■■□□□ 1.1
CACNA1A-257ENST00000638009 RNF10Q8N5U6 811 aaKnown RBP21.9■■□□□ 1.1
CACNA1A-257ENST00000638009 MYO18AQ92614 2054 aaKnown RBP21.89■■□□□ 1.1
CACNA1A-257ENST00000638009 SRGAP3O43295 1099 aa21.89■■□□□ 1.1
CACNA1A-257ENST00000638009 INPP1P49441 399 aa21.89■■□□□ 1.1
CACNA1A-257ENST00000638009 TNNC1P63316 161 aa21.89■■□□□ 1.1
CACNA1A-257ENST00000638009 TUBB2AQ13885 445 aa21.89■■□□□ 1.1
CACNA1A-257ENST00000638009 GKAP1Q5VSY0 366 aaPredicted RBP21.89■■□□□ 1.1
CACNA1A-257ENST00000638009 SELENOSQ9BQE4 189 aa21.89■■□□□ 1.1
CACNA1A-257ENST00000638009 TUBB2BQ9BVA1 445 aa21.89■■□□□ 1.1
CACNA1A-257ENST00000638009 NOB1Q9ULX3 412 aaKnown RBP21.89■■□□□ 1.1
CACNA1A-257ENST00000638009 UBASH3AP57075 661 aa21.89■■□□□ 1.1
CACNA1A-257ENST00000638009 MAP3K12Q12852 859 aa21.89■■□□□ 1.09
CACNA1A-257ENST00000638009 NUTM2DQ5VT03 806 aaPredicted RBP21.89■■□□□ 1.09
CACNA1A-257ENST00000638009 ZEB2O60315 1214 aa21.89■■□□□ 1.09
CACNA1A-257ENST00000638009 N4BP3O15049 544 aa21.88■■□□□ 1.09
CACNA1A-257ENST00000638009 POLR3DP05423 398 aaPredicted RBP21.88■■□□□ 1.09
CACNA1A-257ENST00000638009 RAB11FIP4Q86YS3 637 aa21.88■■□□□ 1.09
CACNA1A-257ENST00000638009 TATP17735 454 aaPredicted RBP21.88■■□□□ 1.09
CACNA1A-257ENST00000638009 SLC4A8Q2Y0W8 1093 aa21.88■■□□□ 1.09
CACNA1A-257ENST00000638009 LUC7L3O95232 432 aaKnown RBP21.88■■□□□ 1.09
CACNA1A-257ENST00000638009 BICDL2A1A5D9 508 aa21.88■■□□□ 1.09
CACNA1A-257ENST00000638009 ATP2A3Q93084 1043 aa21.88■■□□□ 1.09
CACNA1A-257ENST00000638009 FCHSD2O94868 740 aa21.88■■□□□ 1.09
CACNA1A-257ENST00000638009 ZNF444Q8N0Y2 327 aaPredicted RBP21.88■■□□□ 1.09
CACNA1A-257ENST00000638009 FSIP1Q8NA03 581 aa21.88■■□□□ 1.09
CACNA1A-257ENST00000638009 TRIM47Q96LD4 638 aa21.88■■□□□ 1.09
CACNA1A-257ENST00000638009 STK10O94804 968 aaKnown RBP21.87■■□□□ 1.09
CACNA1A-257ENST00000638009 NBPF7P0C2Y1 421 aaPredicted RBP21.87■■□□□ 1.09
CACNA1A-257ENST00000638009 ACTN4O43707 911 aaKnown RBP21.87■■□□□ 1.09
CACNA1A-257ENST00000638009 HSPA1LP34931 641 aa21.87■■□□□ 1.09
CACNA1A-257ENST00000638009 CLNS1AP54105 237 aaKnown RBP21.87■■□□□ 1.09
CACNA1A-257ENST00000638009 TTF1Q15361 905 aaPredicted RBP21.87■■□□□ 1.09
CACNA1A-257ENST00000638009 PHF23Q9BUL5 403 aaPredicted RBP21.87■■□□□ 1.09
CACNA1A-257ENST00000638009 SPG7Q9UQ90 795 aa21.87■■□□□ 1.09
CACNA1A-257ENST00000638009 PPP1R7Q15435 360 aa21.87■■□□□ 1.09
CACNA1A-257ENST00000638009 PSPC1Q8WXF1 523 aaKnown RBP21.87■■□□□ 1.09
CACNA1A-257ENST00000638009 ABCC8Q09428 1581 aa21.87■■□□□ 1.09
CACNA1A-257ENST00000638009 B4DLN1 442 aa21.87■■□□□ 1.09
CACNA1A-257ENST00000638009 MRPL12P52815 198 aaKnown RBP21.87■■□□□ 1.09
CACNA1A-257ENST00000638009 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.87■■□□□ 1.09
CACNA1A-257ENST00000638009 ATAD2Q6PL18 1390 aa21.86■■□□□ 1.09
CACNA1A-257ENST00000638009 I3L4J1 428 aa21.86■■□□□ 1.09
CACNA1A-257ENST00000638009 ZNF526Q8TF50 670 aaPredicted RBP21.86■■□□□ 1.09
CACNA1A-257ENST00000638009 LIMCH1Q9UPQ0 1083 aa21.86■■□□□ 1.09
CACNA1A-257ENST00000638009 ATP6V0A2Q9Y487 856 aa21.86■■□□□ 1.09
CACNA1A-257ENST00000638009 PPP1R12CQ9BZL4 782 aa21.86■■□□□ 1.09
CACNA1A-257ENST00000638009 SLC4A2P04920 1241 aa21.86■■□□□ 1.09
CACNA1A-257ENST00000638009 HAUS7Q99871 368 aa21.86■■□□□ 1.09
CACNA1A-257ENST00000638009 PLCB1Q9NQ66 1216 aa21.86■■□□□ 1.09
CACNA1A-257ENST00000638009 MUM1L1Q5H9M0 696 aa21.85■■□□□ 1.09
CACNA1A-257ENST00000638009 SIL1Q9H173 461 aa21.85■■□□□ 1.09
CACNA1A-257ENST00000638009 CABP4P57796 275 aa21.85■■□□□ 1.09
CACNA1A-257ENST00000638009 GBP5Q96PP8 586 aa21.85■■□□□ 1.09
CACNA1A-257ENST00000638009 KIF21BO75037 1637 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms