RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 ZGPATQ8N5A5 531 aaKnown RBP6.58□□□□□ -1.36
CHD2-227ENST00000637572 PRIM1P49642 420 aaKnown RBP6.58□□□□□ -1.36
CHD2-227ENST00000637572 TPM4P67936 248 aa6.58□□□□□ -1.36
CHD2-227ENST00000637572 NUCB1Q02818 461 aa6.58□□□□□ -1.36
CHD2-227ENST00000637572 PPP1R15BQ5SWA1 713 aa6.58□□□□□ -1.36
CHD2-227ENST00000637572 TRMT2AQ8IZ69 625 aaKnown RBP6.58□□□□□ -1.36
CHD2-227ENST00000637572 RHPN1Q8TCX5 695 aa6.58□□□□□ -1.36
CHD2-227ENST00000637572 ZSCAN31Q96LW9 406 aaPredicted RBP6.58□□□□□ -1.36
CHD2-227ENST00000637572 MEIS3Q99687 375 aa6.58□□□□□ -1.36
CHD2-227ENST00000637572 BRMS1Q9HCU9 246 aa6.58□□□□□ -1.36
CHD2-227ENST00000637572 TMOD2Q9NZR1 351 aa6.58□□□□□ -1.36
CHD2-227ENST00000637572 ANKIB1Q9P2G1 1089 aa6.58□□□□□ -1.36
CHD2-227ENST00000637572 TTC41PQ6P2S7 1318 aa6.58□□□□□ -1.36
CHD2-227ENST00000637572 HMGB1P09429 215 aaKnown RBP6.58□□□□□ -1.36
CHD2-227ENST00000637572 FAM196AQ6ZSG2 479 aa6.58□□□□□ -1.36
CHD2-227ENST00000637572 POM121Q96HA1 1249 aa6.58□□□□□ -1.36
CHD2-227ENST00000637572 DCTPP1Q9H773 170 aa6.58□□□□□ -1.36
CHD2-227ENST00000637572 CWC22Q9HCG8 908 aaKnown RBP6.58□□□□□ -1.36
CHD2-227ENST00000637572 RAI14Q9P0K7 980 aa6.58□□□□□ -1.36
CHD2-227ENST00000637572 MTMR7Q9Y216 660 aa6.58□□□□□ -1.36
CHD2-227ENST00000637572 PTMAP06454 111 aaKnown RBP6.57□□□□□ -1.36
CHD2-227ENST00000637572 AIDAQ96BJ3 306 aa6.57□□□□□ -1.36
CHD2-227ENST00000637572 ZNF496Q96IT1 587 aaPredicted RBP6.57□□□□□ -1.36
CHD2-227ENST00000637572 SGIP1Q9BQI5 828 aa6.57□□□□□ -1.36
CHD2-227ENST00000637572 ANKRD2Q9GZV1 360 aa6.57□□□□□ -1.36
CHD2-227ENST00000637572 USP32Q8NFA0 1604 aa6.57□□□□□ -1.36
CHD2-227ENST00000637572 SH3TC1Q8TE82 1336 aa6.57□□□□□ -1.36
CHD2-227ENST00000637572 IMMTQ16891 758 aaKnown RBP6.57□□□□□ -1.36
CHD2-227ENST00000637572 NOL8Q76FK4 1167 aaKnown RBP6.57□□□□□ -1.36
CHD2-227ENST00000637572 RNF123Q5XPI4 1314 aa6.57□□□□□ -1.36
CHD2-227ENST00000637572 ZNF521Q96K83 1311 aa6.57□□□□□ -1.36
CHD2-227ENST00000637572 ANXA1P04083 346 aa6.57□□□□□ -1.36
CHD2-227ENST00000637572 FECHP22830 423 aa6.57□□□□□ -1.36
CHD2-227ENST00000637572 TNS4Q8IZW8 715 aa6.57□□□□□ -1.36
CHD2-227ENST00000637572 GJD4Q96KN9 370 aaPredicted RBP6.57□□□□□ -1.36
CHD2-227ENST00000637572 OVOS2A0A0J9YW53 1432 aa6.57□□□□□ -1.36
CHD2-227ENST00000637572 OVOS2Q6IE36 1432 aa6.57□□□□□ -1.36
CHD2-227ENST00000637572 MARCH6O60337 910 aa6.56□□□□□ -1.36
CHD2-227ENST00000637572 ZNF853P0CG23 659 aa6.56□□□□□ -1.36
CHD2-227ENST00000637572 LMBR1LQ6UX01 489 aa6.56□□□□□ -1.36
CHD2-227ENST00000637572 TFCP2L1Q9NZI6 479 aa6.56□□□□□ -1.36
CHD2-227ENST00000637572 RGS17Q9UGC6 210 aaPredicted RBP6.56□□□□□ -1.36
CHD2-227ENST00000637572 CDKL5O76039 1030 aa6.56□□□□□ -1.36
CHD2-227ENST00000637572 NUTM1Q86Y26 1132 aa6.56□□□□□ -1.36
CHD2-227ENST00000637572 SMC5Q8IY18 1101 aa6.56□□□□□ -1.36
CHD2-227ENST00000637572 RNF41Q9H4P4 317 aaPredicted RBP6.56□□□□□ -1.36
CHD2-227ENST00000637572 PARP3Q9Y6F1 533 aa6.56□□□□□ -1.36
CHD2-227ENST00000637572 USP19O94966 1318 aa6.56□□□□□ -1.36
CHD2-227ENST00000637572 IRS4O14654 1257 aaPredicted RBP6.56□□□□□ -1.36
CHD2-227ENST00000637572 ZBTB7BO15156 539 aaPredicted RBP6.56□□□□□ -1.36
CHD2-227ENST00000637572 GNPATO15228 680 aa6.56□□□□□ -1.36
CHD2-227ENST00000637572 IDH1O75874 414 aaKnown RBP6.56□□□□□ -1.36
CHD2-227ENST00000637572 NEK4P51957 841 aa6.56□□□□□ -1.36
CHD2-227ENST00000637572 GSTO1P78417 241 aa6.56□□□□□ -1.36
CHD2-227ENST00000637572 CEP85Q6P2H3 762 aa6.56□□□□□ -1.36
CHD2-227ENST00000637572 BLOC1S2Q6QNY1 142 aa6.56□□□□□ -1.36
CHD2-227ENST00000637572 SOS2Q07890 1332 aaPredicted RBP6.56□□□□□ -1.36
CHD2-227ENST00000637572 KIF13AQ9H1H9 1805 aa6.55□□□□□ -1.36
CHD2-227ENST00000637572 PITPNM1O00562 1244 aa6.55□□□□□ -1.36
CHD2-227ENST00000637572 TDO2P48775 406 aa6.55□□□□□ -1.36
CHD2-227ENST00000637572 ATP2B3Q16720 1220 aa6.55□□□□□ -1.36
CHD2-227ENST00000637572 RASSF8Q8NHQ8 419 aa6.55□□□□□ -1.36
CHD2-227ENST00000637572 CCDC85AQ96PX6 553 aaPredicted RBP6.55□□□□□ -1.36
CHD2-227ENST00000637572 HOOK1Q9UJC3 728 aaKnown RBP6.55□□□□□ -1.36
CHD2-227ENST00000637572 OVOS2A0A0G2JMS6 1433 aa6.55□□□□□ -1.36
CHD2-227ENST00000637572 PDE8AO60658 829 aa6.55□□□□□ -1.36
CHD2-227ENST00000637572 BAG3O95817 575 aa6.55□□□□□ -1.36
CHD2-227ENST00000637572 IL6STP40189 918 aaPredicted RBP6.55□□□□□ -1.36
CHD2-227ENST00000637572 DZIP1Q86YF9 867 aaKnown RBP6.55□□□□□ -1.36
CHD2-227ENST00000637572 RETREG2Q8NC44 543 aa6.55□□□□□ -1.36
CHD2-227ENST00000637572 HMG20BQ9P0W2 317 aa6.55□□□□□ -1.36
CHD2-227ENST00000637572 ABCC4O15439 1325 aa6.55□□□□□ -1.36
CHD2-227ENST00000637572 AOX1Q06278 1338 aa6.55□□□□□ -1.36
CHD2-227ENST00000637572 CRB1P82279 1406 aa6.55□□□□□ -1.36
CHD2-227ENST00000637572 PPP4R3BQ5MIZ7 849 aa6.55□□□□□ -1.36
CHD2-227ENST00000637572 TTC22Q5TAA0 569 aa6.55□□□□□ -1.36
CHD2-227ENST00000637572 CWC27Q6UX04 472 aaKnown RBP6.55□□□□□ -1.36
CHD2-227ENST00000637572 DNAJC10Q8IXB1 793 aa6.55□□□□□ -1.36
CHD2-227ENST00000637572 BOLA2Q9H3K6 86 aa6.55□□□□□ -1.36
CHD2-227ENST00000637572 KDRP35968 1356 aa6.55□□□□□ -1.36
CHD2-227ENST00000637572 MAP3K9P80192 1104 aa6.54□□□□□ -1.36
CHD2-227ENST00000637572 TCIRG1Q13488 830 aa6.54□□□□□ -1.36
CHD2-227ENST00000637572 KRT24Q2M2I5 525 aa6.54□□□□□ -1.36
CHD2-227ENST00000637572 TRIM22Q8IYM9 498 aa6.54□□□□□ -1.36
CHD2-227ENST00000637572 EYA3Q99504 573 aa6.54□□□□□ -1.36
CHD2-227ENST00000637572 PHAXQ9H814 394 aaKnown RBP6.54□□□□□ -1.36
CHD2-227ENST00000637572 ABCF2Q9UG63 623 aa6.54□□□□□ -1.36
CHD2-227ENST00000637572 KAT6BQ8WYB5 2073 aa6.54□□□□□ -1.36
CHD2-227ENST00000637572 MDM2Q00987 491 aaPredicted RBP6.54□□□□□ -1.36
CHD2-227ENST00000637572 CERS3Q8IU89 383 aa6.54□□□□□ -1.36
CHD2-227ENST00000637572 CCDC8Q9H0W5 538 aaPredicted RBP6.54□□□□□ -1.36
CHD2-227ENST00000637572 PCDHB15Q9Y5E8 787 aa6.54□□□□□ -1.36
CHD2-227ENST00000637572 PLEKHG2Q9H7P9 1386 aa6.54□□□□□ -1.36
CHD2-227ENST00000637572 CPDO75976 1380 aa6.54□□□□□ -1.36
CHD2-227ENST00000637572 GCKRQ14397 625 aa6.54□□□□□ -1.36
CHD2-227ENST00000637572 CNBD1Q8NA66 436 aa6.54□□□□□ -1.36
CHD2-227ENST00000637572 CCDC47Q96A33 483 aaKnown RBP6.54□□□□□ -1.36
CHD2-227ENST00000637572 RBM17Q96I25 401 aaKnown RBP6.54□□□□□ -1.36
CHD2-227ENST00000637572 UBAC1Q9BSL1 405 aa6.54□□□□□ -1.36
CHD2-227ENST00000637572 C6orf229H3BNL8 230 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms