RNA–Protein interactions for RNA: ENST00000637387.1

CTSD-211, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-211ENST00000637387 COL4A1P02462 1669 aa18.95■□□□□ 0.62
CTSD-211ENST00000637387 AK9Q5TCS8 1911 aa18.94■□□□□ 0.62
CTSD-211ENST00000637387 PTPN12Q05209 780 aaKnown RBP18.94■□□□□ 0.62
CTSD-211ENST00000637387 PLEKHM2Q8IWE5 1019 aa18.94■□□□□ 0.62
CTSD-211ENST00000637387 KLHDC4Q8TBB5 520 aa18.94■□□□□ 0.62
CTSD-211ENST00000637387 COPRSQ9NQ92 184 aa18.94■□□□□ 0.62
CTSD-211ENST00000637387 NIP7Q9Y221 180 aaKnown RBP eCLIP18.94■□□□□ 0.624e-13■□□□□ 10.1
CTSD-211ENST00000637387 ZNF652Q9Y2D9 606 aa18.94■□□□□ 0.62
CTSD-211ENST00000637387 CHD4Q14839 1912 aa18.94■□□□□ 0.62
CTSD-211ENST00000637387 RAB11FIP3O75154 756 aa18.93■□□□□ 0.62
CTSD-211ENST00000637387 ADRA2BP18089 450 aa18.93■□□□□ 0.62
CTSD-211ENST00000637387 GPR162Q16538 588 aa18.93■□□□□ 0.62
CTSD-211ENST00000637387 C8orf34Q49A92 452 aa18.93■□□□□ 0.62
CTSD-211ENST00000637387 PARP10Q53GL7 1025 aa18.93■□□□□ 0.62
CTSD-211ENST00000637387 TRAPPC3LQ5T215 181 aa18.93■□□□□ 0.62
CTSD-211ENST00000637387 RHPN1Q8TCX5 695 aa18.93■□□□□ 0.62
CTSD-211ENST00000637387 TRMT112Q9UI30 125 aaKnown RBP18.93■□□□□ 0.62
CTSD-211ENST00000637387 UTRNP46939 3433 aa18.93■□□□□ 0.62
CTSD-211ENST00000637387 TBC1D9BQ66K14 1250 aa18.93■□□□□ 0.62
CTSD-211ENST00000637387 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.93■□□□□ 0.62
CTSD-211ENST00000637387 TAF1P21675 1872 aa18.93■□□□□ 0.62
CTSD-211ENST00000637387 CSF1RP07333 972 aa18.92■□□□□ 0.62
CTSD-211ENST00000637387 IRS4O14654 1257 aaPredicted RBP18.91■□□□□ 0.62
CTSD-211ENST00000637387 SASH1O94885 1247 aa18.91■□□□□ 0.62
CTSD-211ENST00000637387 KIF1BPQ96EK5 621 aa18.91■□□□□ 0.62
CTSD-211ENST00000637387 SH3TC1Q8TE82 1336 aa18.91■□□□□ 0.62
CTSD-211ENST00000637387 FAM161AQ3B820 660 aa18.9■□□□□ 0.62
CTSD-211ENST00000637387 HSP90AB4PQ58FF6 505 aa18.9■□□□□ 0.62
CTSD-211ENST00000637387 UTP14AQ9BVJ6 771 aaKnown RBP18.9■□□□□ 0.62
CTSD-211ENST00000637387 BACH2Q9BYV9 841 aa18.9■□□□□ 0.62
CTSD-211ENST00000637387 IL1RAPL2Q9NP60 686 aa18.9■□□□□ 0.62
CTSD-211ENST00000637387 NRXN2Q9P2S2 1712 aa18.9■□□□□ 0.62
CTSD-211ENST00000637387 YBX3P16989 372 aaKnown RBP eCLIP18.89■□□□□ 0.621e-6■■□□□ 11.5
CTSD-211ENST00000637387 CTSWP56202 376 aa18.89■□□□□ 0.62
CTSD-211ENST00000637387 TTLL11Q8NHH1 800 aa18.89■□□□□ 0.62
CTSD-211ENST00000637387 SIL1Q9H173 461 aa18.89■□□□□ 0.62
CTSD-211ENST00000637387 ABCC12Q96J65 1359 aa18.89■□□□□ 0.62
CTSD-211ENST00000637387 ARAP2Q8WZ64 1704 aa18.89■□□□□ 0.61
CTSD-211ENST00000637387 ZPR1O75312 459 aa18.89■□□□□ 0.61
CTSD-211ENST00000637387 GSPT1P15170 499 aaKnown RBP18.89■□□□□ 0.61
CTSD-211ENST00000637387 NLGN1Q8N2Q7 840 aa18.89■□□□□ 0.61
CTSD-211ENST00000637387 FAM177BA6PVY3 158 aa18.88■□□□□ 0.61
CTSD-211ENST00000637387 PDE8AO60658 829 aa18.88■□□□□ 0.61
CTSD-211ENST00000637387 GYS1P13807 737 aa18.88■□□□□ 0.61
CTSD-211ENST00000637387 RFC4P35249 363 aa18.88■□□□□ 0.61
CTSD-211ENST00000637387 NUTM1Q86Y26 1132 aa18.88■□□□□ 0.61
CTSD-211ENST00000637387 OSBPL3Q9H4L5 887 aa18.88■□□□□ 0.61
CTSD-211ENST00000637387 CHMP3Q9Y3E7 222 aa18.88■□□□□ 0.61
CTSD-211ENST00000637387 MMP10P09238 476 aa18.87■□□□□ 0.61
CTSD-211ENST00000637387 BMP2KLQ5H9B9 411 aa18.87■□□□□ 0.61
CTSD-211ENST00000637387 ATG9AQ7Z3C6 839 aa18.87■□□□□ 0.61
CTSD-211ENST00000637387 ERC1Q8IUD2 1116 aa18.87■□□□□ 0.61
CTSD-211ENST00000637387 ZBTB47Q9UFB7 747 aaPredicted RBP18.87■□□□□ 0.61
CTSD-211ENST00000637387 RIC1Q4ADV7 1423 aa18.87■□□□□ 0.61
CTSD-211ENST00000637387 ANKRD31Q8N7Z5 1873 aa18.86■□□□□ 0.61
CTSD-211ENST00000637387 GRIN3BO60391 1043 aa18.86■□□□□ 0.61
CTSD-211ENST00000637387 HCLS1P14317 486 aaPredicted RBP18.86■□□□□ 0.61
CTSD-211ENST00000637387 PDE1AP54750 535 aa18.86■□□□□ 0.61
CTSD-211ENST00000637387 TTC22Q5TAA0 569 aa18.86■□□□□ 0.61
CTSD-211ENST00000637387 BICDL1Q6ZP65 573 aa18.86■□□□□ 0.61
CTSD-211ENST00000637387 ZNF594Q96JF6 807 aaPredicted RBP18.86■□□□□ 0.61
CTSD-211ENST00000637387 GREM2Q9H772 168 aa18.86■□□□□ 0.61
CTSD-211ENST00000637387 G3BP1Q13283 466 aaKnown RBP eCLIP18.85■□□□□ 0.61
CTSD-211ENST00000637387 OS9Q13438 667 aaPredicted RBP18.85■□□□□ 0.61
CTSD-211ENST00000637387 ZNF784Q8NCA9 323 aaPredicted RBP18.85■□□□□ 0.61
CTSD-211ENST00000637387 CCDC85AQ96PX6 553 aaPredicted RBP18.85■□□□□ 0.61
CTSD-211ENST00000637387 BCL11AQ9H165 835 aa18.85■□□□□ 0.61
CTSD-211ENST00000637387 RTL9Q8NET4 1388 aa18.85■□□□□ 0.61
CTSD-211ENST00000637387 MX1P20591 662 aa18.85■□□□□ 0.61
CTSD-211ENST00000637387 ERFEQ4G0M1 354 aa18.85■□□□□ 0.61
CTSD-211ENST00000637387 STAP2Q9UGK3 403 aa18.85■□□□□ 0.61
CTSD-211ENST00000637387 CARMIL3Q8ND23 1372 aa18.84■□□□□ 0.61
CTSD-211ENST00000637387 ZNF609O15014 1411 aa18.84■□□□□ 0.61
CTSD-211ENST00000637387 KIF13BQ9NQT8 1826 aa18.84■□□□□ 0.61
CTSD-211ENST00000637387 NFIXQ14938 502 aa18.84■□□□□ 0.61
CTSD-211ENST00000637387 TSHZ3Q63HK5 1081 aa18.84■□□□□ 0.61
CTSD-211ENST00000637387 PUS3Q9BZE2 481 aaKnown RBP18.84■□□□□ 0.61
CTSD-211ENST00000637387 ITGA6P23229 1130 aa18.83■□□□□ 0.6
CTSD-211ENST00000637387 LRRC24Q50LG9 513 aa18.83■□□□□ 0.6
CTSD-211ENST00000637387 C3orf67Q6ZVT6 689 aa18.83■□□□□ 0.6
CTSD-211ENST00000637387 EAF2Q96CJ1 260 aaPredicted RBP18.83■□□□□ 0.6
CTSD-211ENST00000637387 SETDB2Q96T68 719 aa18.83■□□□□ 0.6
CTSD-211ENST00000637387 AOX1Q06278 1338 aa18.83■□□□□ 0.6
CTSD-211ENST00000637387 EYA2O00167 538 aa18.82■□□□□ 0.6
CTSD-211ENST00000637387 CIAO1O76071 339 aa18.82■□□□□ 0.6
CTSD-211ENST00000637387 CCDC57Q2TAC2 916 aa18.82■□□□□ 0.6
CTSD-211ENST00000637387 TFCP2Q12800 502 aa18.81■□□□□ 0.6
CTSD-211ENST00000637387 IFIT5Q13325 482 aaKnown RBP18.81■□□□□ 0.6
CTSD-211ENST00000637387 SLC10A5Q5PT55 438 aa18.81■□□□□ 0.6
CTSD-211ENST00000637387 CLASRPQ8N2M8 674 aaKnown RBP18.81■□□□□ 0.6
CTSD-211ENST00000637387 PI4K2BQ8TCG2 481 aa18.81■□□□□ 0.6
CTSD-211ENST00000637387 KIAA1551Q9HCM1 1747 aa18.81■□□□□ 0.6
CTSD-211ENST00000637387 C10orf71Q711Q0 1435 aa18.81■□□□□ 0.6
CTSD-211ENST00000637387 GOLGB1Q14789 3259 aaKnown RBP18.81■□□□□ 0.6
CTSD-211ENST00000637387 NYXQ9GZU5 481 aa18.81■□□□□ 0.6
CTSD-211ENST00000637387 TLR7Q9NYK1 1049 aaKnown RBP18.81■□□□□ 0.6
CTSD-211ENST00000637387 FBXO3Q9UK99 471 aa18.81■□□□□ 0.6
CTSD-211ENST00000637387 IL15P40933 162 aaPredicted RBP18.8■□□□□ 0.6
CTSD-211ENST00000637387 TGFB2P61812 414 aa18.8■□□□□ 0.6
CTSD-211ENST00000637387 ANKRD18BA2A2Z9 1011 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms