RNA–Protein interactions for RNA: ENST00000635120.1

CSMD1-218, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CSMD1, Length 11,737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-218ENST00000635120 FERMT1Q9BQL6 677 aa10.42□□□□□ -0.74
CSMD1-218ENST00000635120 MAP3K2Q9Y2U5 619 aa10.42□□□□□ -0.74
CSMD1-218ENST00000635120 ECHDC1Q9NTX5 307 aa10.42□□□□□ -0.74
CSMD1-218ENST00000635120 STAT6P42226 847 aa10.41□□□□□ -0.74
CSMD1-218ENST00000635120 KIAA0753Q2KHM9 967 aa10.41□□□□□ -0.74
CSMD1-218ENST00000635120 TTC22Q5TAA0 569 aa10.41□□□□□ -0.74
CSMD1-218ENST00000635120 KIF4AO95239 1232 aa10.41□□□□□ -0.74
CSMD1-218ENST00000635120 IARSP41252 1262 aaKnown RBP10.41□□□□□ -0.74
CSMD1-218ENST00000635120 TTF1Q15361 905 aaPredicted RBP10.41□□□□□ -0.74
CSMD1-218ENST00000635120 ANKLE2Q86XL3 938 aa10.41□□□□□ -0.74
CSMD1-218ENST00000635120 DDX23Q9BUQ8 820 aaKnown RBP10.41□□□□□ -0.74
CSMD1-218ENST00000635120 IQCGQ9H095 443 aaKnown RBP10.41□□□□□ -0.74
CSMD1-218ENST00000635120 RSPH14Q9UHP6 348 aa10.41□□□□□ -0.74
CSMD1-218ENST00000635120 CCDC61Q9Y6R9 512 aa10.41□□□□□ -0.74
CSMD1-218ENST00000635120 BMP2KLQ5H9B9 411 aa10.41□□□□□ -0.74
CSMD1-218ENST00000635120 PTGS1P23219 599 aa10.41□□□□□ -0.74
CSMD1-218ENST00000635120 AFMP43652 599 aa10.41□□□□□ -0.74
CSMD1-218ENST00000635120 PDE4BQ07343 736 aa10.41□□□□□ -0.74
CSMD1-218ENST00000635120 ERMNQ8TAM6 284 aa10.41□□□□□ -0.74
CSMD1-218ENST00000635120 SKILP12757 684 aa10.41□□□□□ -0.74
CSMD1-218ENST00000635120 KCNH5Q8NCM2 988 aa10.41□□□□□ -0.74
CSMD1-218ENST00000635120 UBE3BQ7Z3V4 1068 aa10.4□□□□□ -0.74
CSMD1-218ENST00000635120 TBC1D32Q96NH3 1257 aa10.4□□□□□ -0.74
CSMD1-218ENST00000635120 RMND1Q9NWS8 449 aa10.4□□□□□ -0.74
CSMD1-218ENST00000635120 APBB1IPQ7Z5R6 666 aaPredicted RBP10.4□□□□□ -0.74
CSMD1-218ENST00000635120 KAT14Q9H8E8 782 aa10.4□□□□□ -0.74
CSMD1-218ENST00000635120 PABPN1LA6NDY0 278 aaKnown RBP10.4□□□□□ -0.74
CSMD1-218ENST00000635120 AMOTQ4VCS5 1084 aa10.4□□□□□ -0.74
CSMD1-218ENST00000635120 SNRKQ9NRH2 765 aa10.4□□□□□ -0.74
CSMD1-218ENST00000635120 GPTP24298 496 aa10.4□□□□□ -0.74
CSMD1-218ENST00000635120 CCDC6Q16204 474 aa10.4□□□□□ -0.74
CSMD1-218ENST00000635120 NAIPQ13075 1403 aa10.4□□□□□ -0.74
CSMD1-218ENST00000635120 FLIIQ13045 1269 aa10.4□□□□□ -0.74
CSMD1-218ENST00000635120 PLVAPQ9BX97 442 aa10.4□□□□□ -0.74
CSMD1-218ENST00000635120 POGZQ7Z3K3 1410 aa10.4□□□□□ -0.74
CSMD1-218ENST00000635120 IVLP07476 585 aa10.4□□□□□ -0.75
CSMD1-218ENST00000635120 DNMBPQ6XZF7 1577 aa10.4□□□□□ -0.75
CSMD1-218ENST00000635120 RRAGBQ5VZM2 374 aa10.4□□□□□ -0.75
CSMD1-218ENST00000635120 CCDC174Q6PII3 467 aa10.4□□□□□ -0.75
CSMD1-218ENST00000635120 CCDC172P0C7W6 258 aa10.39□□□□□ -0.75
CSMD1-218ENST00000635120 ARL1P40616 181 aaPredicted RBP10.39□□□□□ -0.75
CSMD1-218ENST00000635120 EIF2AK4Q9P2K8 1649 aaKnown RBP10.39□□□□□ -0.75
CSMD1-218ENST00000635120 DDX12PQ92771 950 aa10.39□□□□□ -0.75
CSMD1-218ENST00000635120 CAPZA3Q96KX2 299 aa10.39□□□□□ -0.75
CSMD1-218ENST00000635120 PIK3R4Q99570 1358 aa10.39□□□□□ -0.75
CSMD1-218ENST00000635120 UVSSAQ2YD98 709 aa10.39□□□□□ -0.75
CSMD1-218ENST00000635120 TMEM87AQ8NBN3 555 aa10.39□□□□□ -0.75
CSMD1-218ENST00000635120 NCOA7Q8NI08 942 aa10.39□□□□□ -0.75
CSMD1-218ENST00000635120 CCDC160A6NGH7 325 aa10.39□□□□□ -0.75
CSMD1-218ENST00000635120 ARID5AQ03989 594 aa10.39□□□□□ -0.75
CSMD1-218ENST00000635120 SELENOOQ9BVL4 669 aa10.39□□□□□ -0.75
CSMD1-218ENST00000635120 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.39□□□□□ -0.75
CSMD1-218ENST00000635120 TSPY2A6NKD2 308 aa10.39□□□□□ -0.75
CSMD1-218ENST00000635120 KRT13P13646 458 aa10.39□□□□□ -0.75
CSMD1-218ENST00000635120 LRRC2Q9BYS8 371 aa10.39□□□□□ -0.75
CSMD1-218ENST00000635120 DBF4Q9UBU7 674 aaPredicted RBP10.39□□□□□ -0.75
CSMD1-218ENST00000635120 DHX29Q7Z478 1369 aaKnown RBP10.39□□□□□ -0.75
CSMD1-218ENST00000635120 KLHL40Q2TBA0 621 aa10.39□□□□□ -0.75
CSMD1-218ENST00000635120 ZSCAN22P10073 491 aaPredicted RBP10.39□□□□□ -0.75
CSMD1-218ENST00000635120 SNAPC4Q5SXM2 1469 aa10.39□□□□□ -0.75
CSMD1-218ENST00000635120 MRPS9P82933 396 aaKnown RBP10.39□□□□□ -0.75
CSMD1-218ENST00000635120 NME9Q86XW9 330 aa10.39□□□□□ -0.75
CSMD1-218ENST00000635120 CTAGE1Q96RT6 745 aa10.39□□□□□ -0.75
CSMD1-218ENST00000635120 DNAI1Q9UI46 699 aa10.39□□□□□ -0.75
CSMD1-218ENST00000635120 SYT1P21579 422 aa10.39□□□□□ -0.75
CSMD1-218ENST00000635120 ZBTB16Q05516 673 aa10.39□□□□□ -0.75
CSMD1-218ENST00000635120 PPP1R42Q7Z4L9 355 aa10.39□□□□□ -0.75
CSMD1-218ENST00000635120 ZSCAN16Q9H4T2 348 aaPredicted RBP10.39□□□□□ -0.75
CSMD1-218ENST00000635120 CWC25Q9NXE8 425 aaPredicted RBP10.39□□□□□ -0.75
CSMD1-218ENST00000635120 ATRIPQ8WXE1 791 aa10.38□□□□□ -0.75
CSMD1-218ENST00000635120 MRC2Q9UBG0 1479 aa10.38□□□□□ -0.75
CSMD1-218ENST00000635120 LRSAM1Q6UWE0 723 aa10.38□□□□□ -0.75
CSMD1-218ENST00000635120 SSX2IPQ9Y2D8 614 aa10.38□□□□□ -0.75
CSMD1-218ENST00000635120 OTUD6BQ8N6M0 293 aa10.38□□□□□ -0.75
CSMD1-218ENST00000635120 NECAB1Q8N987 351 aa10.38□□□□□ -0.75
CSMD1-218ENST00000635120 WAPLQ7Z5K2 1190 aa10.38□□□□□ -0.75
CSMD1-218ENST00000635120 ZBTB9Q96C00 473 aa10.38□□□□□ -0.75
CSMD1-218ENST00000635120 CFAP57Q96MR6 1250 aa10.38□□□□□ -0.75
CSMD1-218ENST00000635120 GOLGA1Q92805 767 aa10.38□□□□□ -0.75
CSMD1-218ENST00000635120 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.38□□□□□ -0.75
CSMD1-218ENST00000635120 V9GYY5 206 aaPredicted RBP10.38□□□□□ -0.75
CSMD1-218ENST00000635120 TMEM110-MUSTN1A8MSY1 372 aa10.38□□□□□ -0.75
CSMD1-218ENST00000635120 RGS22Q8NE09 1264 aa10.38□□□□□ -0.75
CSMD1-218ENST00000635120 KCNG4Q8TDN1 519 aa10.38□□□□□ -0.75
CSMD1-218ENST00000635120 SPAG5Q96R06 1193 aa10.38□□□□□ -0.75
CSMD1-218ENST00000635120 CTAGE15A4D2H0 777 aa10.38□□□□□ -0.75
CSMD1-218ENST00000635120 BAG3O95817 575 aa10.38□□□□□ -0.75
CSMD1-218ENST00000635120 CTAGE8P0CG41 777 aa10.38□□□□□ -0.75
CSMD1-218ENST00000635120 CCDC121Q6ZUS5 278 aa10.38□□□□□ -0.75
CSMD1-218ENST00000635120 CTAGE6Q86UF2 777 aa10.38□□□□□ -0.75
CSMD1-218ENST00000635120 CTAGE4Q8IX94 777 aa10.38□□□□□ -0.75
CSMD1-218ENST00000635120 AOPEPQ8N6M6 819 aa10.38□□□□□ -0.75
CSMD1-218ENST00000635120 NEK1Q96PY6 1258 aa10.38□□□□□ -0.75
CSMD1-218ENST00000635120 STMN4Q9H169 189 aaPredicted RBP10.38□□□□□ -0.75
CSMD1-218ENST00000635120 MRVI1Q9Y6F6 885 aa10.38□□□□□ -0.75
CSMD1-218ENST00000635120 ASXL1Q8IXJ9 1541 aa10.37□□□□□ -0.75
CSMD1-218ENST00000635120 WTAPQ15007 396 aa10.37□□□□□ -0.75
CSMD1-218ENST00000635120 CYLC1P35663 651 aaPredicted RBP10.37□□□□□ -0.75
CSMD1-218ENST00000635120 ASIC1P78348 528 aa10.37□□□□□ -0.75
CSMD1-218ENST00000635120 TTC12Q9H892 705 aaPredicted RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms