RNA–Protein interactions for RNA: ENST00000626847.2

SMN2-214, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-214ENST00000626847 GPKOWQ92917 476 aaPredicted RBP eCLIP10.18□□□□□ -0.78
SMN2-214ENST00000626847 DONSONQ9NYP3 566 aa10.18□□□□□ -0.78
SMN2-214ENST00000626847 CGNQ9P2M7 1197 aaKnown RBP10.18□□□□□ -0.78
SMN2-214ENST00000626847 AMOTL2Q9Y2J4 779 aa10.18□□□□□ -0.78
SMN2-214ENST00000626847 GPSM3Q9Y4H4 160 aa10.18□□□□□ -0.78
SMN2-214ENST00000626847 PCDHB9Q9Y5E1 797 aa10.18□□□□□ -0.78
SMN2-214ENST00000626847 CEP350Q5VT06 3117 aa10.18□□□□□ -0.78
SMN2-214ENST00000626847 SOS2Q07890 1332 aaPredicted RBP10.18□□□□□ -0.78
SMN2-214ENST00000626847 PTPRUQ92729 1446 aa10.18□□□□□ -0.78
SMN2-214ENST00000626847 RIMS2Q9UQ26 1411 aa10.18□□□□□ -0.78
SMN2-214ENST00000626847 PIK3CDO00329 1044 aa10.17□□□□□ -0.78
SMN2-214ENST00000626847 LIG1P18858 919 aa10.17□□□□□ -0.78
SMN2-214ENST00000626847 ERCC3P19447 782 aa10.17□□□□□ -0.78
SMN2-214ENST00000626847 SLFNL1Q499Z3 407 aa10.17□□□□□ -0.78
SMN2-214ENST00000626847 THSD4Q6ZMP0 1018 aa10.17□□□□□ -0.78
SMN2-214ENST00000626847 CCDC24Q8N4L8 307 aa10.17□□□□□ -0.78
SMN2-214ENST00000626847 NFATC2IPQ8NCF5 419 aa10.17□□□□□ -0.78
SMN2-214ENST00000626847 PRDM9Q9NQV7 894 aa10.17□□□□□ -0.78
SMN2-214ENST00000626847 FAM13BQ9NYF5 915 aa10.17□□□□□ -0.78
SMN2-214ENST00000626847 MYOM2P54296 1465 aa10.17□□□□□ -0.78
SMN2-214ENST00000626847 UTRNP46939 3433 aa10.17□□□□□ -0.78
SMN2-214ENST00000626847 NOS1P29475 1434 aa10.17□□□□□ -0.78
SMN2-214ENST00000626847 COL22A1Q8NFW1 1626 aaPredicted RBP10.17□□□□□ -0.78
SMN2-214ENST00000626847 LOC102724159A0A0B4J2E5 919 aa10.16□□□□□ -0.78
SMN2-214ENST00000626847 CARNS1A5YM72 827 aa10.16□□□□□ -0.78
SMN2-214ENST00000626847 KCNJ4P48050 445 aa10.16□□□□□ -0.78
SMN2-214ENST00000626847 MMP16P51512 607 aa10.16□□□□□ -0.78
SMN2-214ENST00000626847 GABPB1Q06547 395 aaPredicted RBP10.16□□□□□ -0.78
SMN2-214ENST00000626847 KCNA1Q09470 495 aa10.16□□□□□ -0.78
SMN2-214ENST00000626847 PWP2Q15269 919 aaKnown RBP10.16□□□□□ -0.78
SMN2-214ENST00000626847 KRT27Q7Z3Y8 459 aa10.16□□□□□ -0.78
SMN2-214ENST00000626847 RNF217Q8TC41 542 aa10.16□□□□□ -0.78
SMN2-214ENST00000626847 RAD50Q92878 1312 aa10.16□□□□□ -0.78
SMN2-214ENST00000626847 CEP162Q5TB80 1403 aa10.16□□□□□ -0.78
SMN2-214ENST00000626847 TRPM2O94759 1503 aa10.16□□□□□ -0.78
SMN2-214ENST00000626847 LAMC1P11047 1609 aa10.16□□□□□ -0.78
SMN2-214ENST00000626847 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.16□□□□□ -0.78
SMN2-214ENST00000626847 HMGB1P1B2RPK0 211 aaPredicted RBP10.16□□□□□ -0.78
SMN2-214ENST00000626847 RBM25P49756 843 aaKnown RBP10.16□□□□□ -0.78
SMN2-214ENST00000626847 MCCD1P59942 119 aaPredicted RBP10.16□□□□□ -0.78
SMN2-214ENST00000626847 UNC5CLQ8IV45 518 aa10.16□□□□□ -0.78
SMN2-214ENST00000626847 EHBP1L1Q8N3D4 1523 aa10.15□□□□□ -0.78
SMN2-214ENST00000626847 FSD2A1L4K1 749 aa10.15□□□□□ -0.79
SMN2-214ENST00000626847 USP17L3A6NCW0 530 aa10.15□□□□□ -0.79
SMN2-214ENST00000626847 USP17L4A6NCW7 530 aa10.15□□□□□ -0.79
SMN2-214ENST00000626847 ZPR1O75312 459 aa10.15□□□□□ -0.79
SMN2-214ENST00000626847 ADH1BP00325 375 aa10.15□□□□□ -0.79
SMN2-214ENST00000626847 TRDNQ13061 729 aa10.15□□□□□ -0.79
SMN2-214ENST00000626847 USP17L2Q6R6M4 530 aa10.15□□□□□ -0.79
SMN2-214ENST00000626847 NYAP1Q6ZVC0 841 aa10.15□□□□□ -0.79
SMN2-214ENST00000626847 USP17L1Q7RTZ2 530 aa10.15□□□□□ -0.79
SMN2-214ENST00000626847 ARHGAP9Q9BRR9 750 aa10.15□□□□□ -0.79
SMN2-214ENST00000626847 MYH16Q9H6N6 1097 aa10.15□□□□□ -0.79
SMN2-214ENST00000626847 MED4Q9NPJ6 270 aa10.15□□□□□ -0.79
SMN2-214ENST00000626847 ANAPC4Q9UJX5 808 aa10.15□□□□□ -0.79
SMN2-214ENST00000626847 USP17L5A8MUK1 530 aa10.14□□□□□ -0.79
SMN2-214ENST00000626847 TLL1O43897 1013 aa10.14□□□□□ -0.79
SMN2-214ENST00000626847 GTF2A1P52655 376 aaPredicted RBP10.14□□□□□ -0.79
SMN2-214ENST00000626847 ZRSR2Q15696 482 aaKnown RBP10.14□□□□□ -0.79
SMN2-214ENST00000626847 ZBTB33Q86T24 672 aa10.14□□□□□ -0.79
SMN2-214ENST00000626847 RPAINQ86UA6 219 aa10.14□□□□□ -0.79
SMN2-214ENST00000626847 CEP126Q9P2H0 1117 aa10.14□□□□□ -0.79
SMN2-214ENST00000626847 RIPOR2Q9Y4F9 1068 aa10.14□□□□□ -0.79
SMN2-214ENST00000626847 CAMTA1Q9Y6Y1 1673 aa10.13□□□□□ -0.79
SMN2-214ENST00000626847 C1orf167Q5SNV9 1468 aa10.13□□□□□ -0.79
SMN2-214ENST00000626847 SLIT2O94813 1529 aa10.13□□□□□ -0.79
SMN2-214ENST00000626847 DUOX2Q9NRD8 1548 aa10.13□□□□□ -0.79
SMN2-214ENST00000626847 CTAGE5O15320 804 aa10.13□□□□□ -0.79
SMN2-214ENST00000626847 TNNT3P45378 269 aaPredicted RBP10.13□□□□□ -0.79
SMN2-214ENST00000626847 HS1BP3Q53T59 392 aa10.13□□□□□ -0.79
SMN2-214ENST00000626847 ARMCX6Q7L4S7 300 aa10.13□□□□□ -0.79
SMN2-214ENST00000626847 RNF135Q8IUD6 432 aa10.13□□□□□ -0.79
SMN2-214ENST00000626847 DEPDC4Q8N2C3 294 aa10.13□□□□□ -0.79
SMN2-214ENST00000626847 SGSM3Q96HU1 749 aa10.13□□□□□ -0.79
SMN2-214ENST00000626847 MARF1Q9Y4F3 1742 aaKnown RBP10.12□□□□□ -0.79
SMN2-214ENST00000626847 PPP1R12AO14974 1030 aaPredicted RBP10.12□□□□□ -0.79
SMN2-214ENST00000626847 GFRA3O60609 400 aa10.12□□□□□ -0.79
SMN2-214ENST00000626847 TDO2P48775 406 aa10.12□□□□□ -0.79
SMN2-214ENST00000626847 KANK4Q5T7N3 995 aaPredicted RBP10.12□□□□□ -0.79
SMN2-214ENST00000626847 ZNF513Q8N8E2 541 aaPredicted RBP10.12□□□□□ -0.79
SMN2-214ENST00000626847 SNRNP27Q8WVK2 155 aaKnown RBP10.12□□□□□ -0.79
SMN2-214ENST00000626847 MTRQ99707 1265 aa10.12□□□□□ -0.79
SMN2-214ENST00000626847 UNC93B1Q9H1C4 597 aa10.12□□□□□ -0.79
SMN2-214ENST00000626847 SUDS3Q9H7L9 328 aaPredicted RBP10.12□□□□□ -0.79
SMN2-214ENST00000626847 PPP1R1BQ9UD71 204 aaPredicted RBP10.12□□□□□ -0.79
SMN2-214ENST00000626847 DISP2A7MBM2 1401 aa10.12□□□□□ -0.79
SMN2-214ENST00000626847 MYO5BQ9ULV0 1848 aa10.11□□□□□ -0.79
SMN2-214ENST00000626847 LMTK2Q8IWU2 1503 aa10.11□□□□□ -0.79
SMN2-214ENST00000626847 ADGRL3Q9HAR2 1447 aa10.11□□□□□ -0.79
SMN2-214ENST00000626847 ZRANB2O95218 330 aaKnown RBP eCLIP10.11□□□□□ -0.79
SMN2-214ENST00000626847 PTPN5P54829 565 aa10.11□□□□□ -0.79
SMN2-214ENST00000626847 EZH2Q15910 746 aaKnown RBP10.11□□□□□ -0.79
SMN2-214ENST00000626847 UVSSAQ2YD98 709 aa10.11□□□□□ -0.79
SMN2-214ENST00000626847 PLEKHM2Q8IWE5 1019 aa10.11□□□□□ -0.79
SMN2-214ENST00000626847 FAM174AQ8TBP5 190 aa10.11□□□□□ -0.79
SMN2-214ENST00000626847 ADAM32Q8TC27 787 aa10.11□□□□□ -0.79
SMN2-214ENST00000626847 ORAI2Q96SN7 254 aa10.11□□□□□ -0.79
SMN2-214ENST00000626847 SLC6A16Q9GZN6 736 aa10.11□□□□□ -0.79
SMN2-214ENST00000626847 KLHL33A6NCF5 533 aa10.1□□□□□ -0.79
SMN2-214ENST00000626847 TMEM88BA6NKF7 163 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms