RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 DBF4Q9UBU7 674 aaPredicted RBP14.2□□□□□ -0.14
LINC00538-201ENST00000626109 CRKLP46109 303 aaKnown RBP14.19□□□□□ -0.14
LINC00538-201ENST00000626109 SSH1Q8WYL5 1049 aa14.19□□□□□ -0.14
LINC00538-201ENST00000626109 SPOCK3Q9BQ16 436 aa14.19□□□□□ -0.14
LINC00538-201ENST00000626109 UPF2Q9HAU5 1272 aaKnown RBP14.19□□□□□ -0.14
LINC00538-201ENST00000626109 CCDC87Q9NVE4 849 aa14.19□□□□□ -0.14
LINC00538-201ENST00000626109 CHPF2Q9P2E5 772 aa14.19□□□□□ -0.14
LINC00538-201ENST00000626109 CNTNAP4Q9C0A0 1308 aa14.19□□□□□ -0.14
LINC00538-201ENST00000626109 HMGB1P1B2RPK0 211 aaPredicted RBP14.19□□□□□ -0.14
LINC00538-201ENST00000626109 CLGNO14967 610 aa14.19□□□□□ -0.14
LINC00538-201ENST00000626109 A1BGP04217 495 aa14.19□□□□□ -0.14
LINC00538-201ENST00000626109 ZKSCAN2Q63HK3 967 aa14.19□□□□□ -0.14
LINC00538-201ENST00000626109 BCL2L13Q9BXK5 485 aa14.19□□□□□ -0.14
LINC00538-201ENST00000626109 DDX21Q9NR30 783 aaKnown RBP eCLIP14.19□□□□□ -0.14
LINC00538-201ENST00000626109 ZNF16P17020 682 aaPredicted RBP14.18□□□□□ -0.14
LINC00538-201ENST00000626109 BECN1Q14457 450 aa14.18□□□□□ -0.14
LINC00538-201ENST00000626109 RC3H1Q5TC82 1133 aaKnown RBP14.18□□□□□ -0.14
LINC00538-201ENST00000626109 ZBTB1Q9Y2K1 713 aa14.18□□□□□ -0.14
LINC00538-201ENST00000626109 TAF1LQ8IZX4 1826 aa14.18□□□□□ -0.14
LINC00538-201ENST00000626109 C4BP0C0L5 1744 aa14.18□□□□□ -0.14
LINC00538-201ENST00000626109 CCDC194A0A1B0GVG4 234 aa14.17□□□□□ -0.14
LINC00538-201ENST00000626109 NAALADL2Q58DX5 795 aa14.17□□□□□ -0.14
LINC00538-201ENST00000626109 ZNF622Q969S3 477 aaKnown RBP eCLIP14.17□□□□□ -0.14
LINC00538-201ENST00000626109 HYPKQ9NX55 129 aa14.17□□□□□ -0.14
LINC00538-201ENST00000626109 ZNF330Q9Y3S2 320 aaPredicted RBP14.17□□□□□ -0.14
LINC00538-201ENST00000626109 MYL6BP14649 208 aa14.17□□□□□ -0.14
LINC00538-201ENST00000626109 PIP4K2AP48426 406 aaPredicted RBP14.17□□□□□ -0.14
LINC00538-201ENST00000626109 INTS5Q6P9B9 1019 aaKnown RBP14.17□□□□□ -0.14
LINC00538-201ENST00000626109 ZNF219Q9P2Y4 722 aaPredicted RBP14.17□□□□□ -0.14
LINC00538-201ENST00000626109 RREB1Q92766 1687 aa14.17□□□□□ -0.14
LINC00538-201ENST00000626109 NBPF26B4DH59 902 aa14.16□□□□□ -0.14
LINC00538-201ENST00000626109 ANXA1P04083 346 aa14.16□□□□□ -0.14
LINC00538-201ENST00000626109 MVPQ14764 893 aaKnown RBP14.16□□□□□ -0.14
LINC00538-201ENST00000626109 PDIA6Q15084 440 aa14.16□□□□□ -0.14
LINC00538-201ENST00000626109 NFKBIBQ15653 356 aa14.16□□□□□ -0.14
LINC00538-201ENST00000626109 PROSER3Q2NL68 480 aa14.16□□□□□ -0.14
LINC00538-201ENST00000626109 NBPF14Q5TI25 921 aa14.16□□□□□ -0.14
LINC00538-201ENST00000626109 NBPF10Q6P3W6 841 aaKnown RBP14.16□□□□□ -0.14
LINC00538-201ENST00000626109 GPIHBP1Q8IV16 184 aa14.16□□□□□ -0.14
LINC00538-201ENST00000626109 DZIP1LQ8IYY4 767 aaKnown RBP14.16□□□□□ -0.14
LINC00538-201ENST00000626109 MRPL50Q8N5N7 158 aaKnown RBP14.16□□□□□ -0.14
LINC00538-201ENST00000626109 NBPF15Q8N660 670 aa14.16□□□□□ -0.14
LINC00538-201ENST00000626109 GABBR1Q9UBS5 961 aa14.16□□□□□ -0.14
LINC00538-201ENST00000626109 KIF16BQ96L93 1317 aa14.16□□□□□ -0.14
LINC00538-201ENST00000626109 GNPATO15228 680 aa14.15□□□□□ -0.14
LINC00538-201ENST00000626109 IL6STP40189 918 aaPredicted RBP14.15□□□□□ -0.14
LINC00538-201ENST00000626109 RTCBQ9Y3I0 505 aaKnown RBP14.15□□□□□ -0.14
LINC00538-201ENST00000626109 RPS6KA4O75676 772 aa14.14□□□□□ -0.15
LINC00538-201ENST00000626109 ARID4AP29374 1257 aaPredicted RBP14.14□□□□□ -0.15
LINC00538-201ENST00000626109 SLC4A3P48751 1232 aa14.14□□□□□ -0.15
LINC00538-201ENST00000626109 APLP1P51693 650 aa14.14□□□□□ -0.15
LINC00538-201ENST00000626109 SMYD5Q6GMV2 418 aa14.14□□□□□ -0.15
LINC00538-201ENST00000626109 METTL14Q9HCE5 456 aaKnown RBP14.14□□□□□ -0.15
LINC00538-201ENST00000626109 PCDHB15Q9Y5E8 787 aa14.13□□□□□ -0.15
LINC00538-201ENST00000626109 NUP188Q5SRE5 1749 aa14.13□□□□□ -0.15
LINC00538-201ENST00000626109 IPO8O15397 1037 aaKnown RBP14.13□□□□□ -0.15
LINC00538-201ENST00000626109 RLBP1P12271 317 aa14.13□□□□□ -0.15
LINC00538-201ENST00000626109 EIF5P55010 431 aaKnown RBP14.13□□□□□ -0.15
LINC00538-201ENST00000626109 CCDC181Q5TID7 509 aa14.13□□□□□ -0.15
LINC00538-201ENST00000626109 CLEC4GQ6UXB4 293 aa14.13□□□□□ -0.15
LINC00538-201ENST00000626109 G2E3Q7L622 706 aa14.13□□□□□ -0.15
LINC00538-201ENST00000626109 LRP10Q7Z4F1 713 aa14.13□□□□□ -0.15
LINC00538-201ENST00000626109 XAGE3Q8WTP9 111 aa14.13□□□□□ -0.15
LINC00538-201ENST00000626109 PHAXQ9H814 394 aaKnown RBP14.13□□□□□ -0.15
LINC00538-201ENST00000626109 STK32BQ9NY57 414 aa14.13□□□□□ -0.15
LINC00538-201ENST00000626109 MAGEC2Q9UBF1 373 aaPredicted RBP14.13□□□□□ -0.15
LINC00538-201ENST00000626109 DDX19BQ9UMR2 479 aa14.13□□□□□ -0.15
LINC00538-201ENST00000626109 COL15A1P39059 1388 aa14.13□□□□□ -0.15
LINC00538-201ENST00000626109 PTPRCP08575 1304 aa14.12□□□□□ -0.15
LINC00538-201ENST00000626109 MYH14Q7Z406 1995 aaKnown RBP14.12□□□□□ -0.15
LINC00538-201ENST00000626109 A0A087WZG4 1122 aa14.12□□□□□ -0.15
LINC00538-201ENST00000626109 DDX58O95786 925 aaKnown RBP14.12□□□□□ -0.15
LINC00538-201ENST00000626109 AIMP1Q12904 312 aaKnown RBP14.12□□□□□ -0.15
LINC00538-201ENST00000626109 FKBP5Q13451 457 aaPredicted RBP14.12□□□□□ -0.15
LINC00538-201ENST00000626109 E2F4Q16254 413 aa14.12□□□□□ -0.15
LINC00538-201ENST00000626109 COPS6Q7L5N1 327 aa14.12□□□□□ -0.15
LINC00538-201ENST00000626109 AKT1S1Q96B36 256 aa14.12□□□□□ -0.15
LINC00538-201ENST00000626109 CACNA1FO60840 1977 aa14.12□□□□□ -0.15
LINC00538-201ENST00000626109 GTF2E1P29083 439 aaPredicted RBP14.11□□□□□ -0.15
LINC00538-201ENST00000626109 GSE1Q14687 1217 aa14.11□□□□□ -0.15
LINC00538-201ENST00000626109 ZNF827Q17R98 1081 aa14.11□□□□□ -0.15
LINC00538-201ENST00000626109 KIF6Q6ZMV9 814 aa14.11□□□□□ -0.15
LINC00538-201ENST00000626109 TFCP2L1Q9NZI6 479 aa14.11□□□□□ -0.15
LINC00538-201ENST00000626109 NOB1Q9ULX3 412 aaKnown RBP14.11□□□□□ -0.15
LINC00538-201ENST00000626109 PDZRN3Q9UPQ7 1066 aa14.11□□□□□ -0.15
LINC00538-201ENST00000626109 SSFA2P28290 1259 aa14.11□□□□□ -0.15
LINC00538-201ENST00000626109 MAMSTRQ6ZN01 415 aa14.11□□□□□ -0.15
LINC00538-201ENST00000626109 TRAPPC3LQ5T215 181 aa14.1□□□□□ -0.15
LINC00538-201ENST00000626109 DZIP3Q86Y13 1208 aaKnown RBP14.1□□□□□ -0.15
LINC00538-201ENST00000626109 LARGE2Q8N3Y3 721 aa14.1□□□□□ -0.15
LINC00538-201ENST00000626109 API5Q9BZZ5 524 aaKnown RBP14.1□□□□□ -0.15
LINC00538-201ENST00000626109 MAF1Q9H063 256 aa14.1□□□□□ -0.15
LINC00538-201ENST00000626109 RYDENQ9NUL5 291 aaKnown RBP14.1□□□□□ -0.15
LINC00538-201ENST00000626109 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.09□□□□□ -0.15
LINC00538-201ENST00000626109 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.09□□□□□ -0.15
LINC00538-201ENST00000626109 SLC15A2Q16348 729 aa14.09□□□□□ -0.15
LINC00538-201ENST00000626109 ATF7IPQ6VMQ6 1270 aa14.09□□□□□ -0.15
LINC00538-201ENST00000626109 TTLL7Q6ZT98 887 aa14.09□□□□□ -0.15
LINC00538-201ENST00000626109 FLAD1Q8NFF5 587 aa14.09□□□□□ -0.15
LINC00538-201ENST00000626109 ARHGAP45Q92619 1136 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms