RNA–Protein interactions for RNA: ENST00000619178.1

SNORD3D-201, Transcript of small nucleolar RNA, C/D box 3D, humanhuman

BASIC

Gene SNORD3D, Length 218 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3D-201ENST00000619178 ANKRD18BA2A2Z9 1011 aa13.7□□□□□ -0.22
SNORD3D-201ENST00000619178 MSL1Q68DK7 614 aa13.7□□□□□ -0.22
SNORD3D-201ENST00000619178 PRR5LQ6MZQ0 368 aa13.7□□□□□ -0.22
SNORD3D-201ENST00000619178 LMBR1LQ6UX01 489 aa13.7□□□□□ -0.22
SNORD3D-201ENST00000619178 CENPQQ7L2Z9 268 aaPredicted RBP13.7□□□□□ -0.22
SNORD3D-201ENST00000619178 NUTM1Q86Y26 1132 aa13.7□□□□□ -0.22
SNORD3D-201ENST00000619178 ERC1Q8IUD2 1116 aa13.7□□□□□ -0.22
SNORD3D-201ENST00000619178 SSH3Q8TE77 659 aa13.7□□□□□ -0.22
SNORD3D-201ENST00000619178 RPGRQ92834 1020 aaKnown RBP13.7□□□□□ -0.22
SNORD3D-201ENST00000619178 CDC5LQ99459 802 aaKnown RBP13.7□□□□□ -0.22
SNORD3D-201ENST00000619178 BRIP1Q9BX63 1249 aa13.7□□□□□ -0.22
SNORD3D-201ENST00000619178 COL11A2P13942 1736 aaPredicted RBP13.7□□□□□ -0.22
SNORD3D-201ENST00000619178 SOCS7O14512 581 aa13.69□□□□□ -0.22
SNORD3D-201ENST00000619178 CSF1RP07333 972 aa13.69□□□□□ -0.22
SNORD3D-201ENST00000619178 FOXO4P98177 505 aa13.69□□□□□ -0.22
SNORD3D-201ENST00000619178 DDR1Q08345 913 aa13.69□□□□□ -0.22
SNORD3D-201ENST00000619178 SF3B3Q15393 1217 aaKnown RBP13.69□□□□□ -0.22
SNORD3D-201ENST00000619178 TTLL11Q8NHH1 800 aa13.69□□□□□ -0.22
SNORD3D-201ENST00000619178 PCDHB15Q9Y5E8 787 aa13.69□□□□□ -0.22
SNORD3D-201ENST00000619178 BRCA1P38398 1863 aaKnown RBP13.69□□□□□ -0.22
SNORD3D-201ENST00000619178 HCLS1P14317 486 aaPredicted RBP13.68□□□□□ -0.22
SNORD3D-201ENST00000619178 G3BP1Q13283 466 aaKnown RBP eCLIP13.68□□□□□ -0.22
SNORD3D-201ENST00000619178 OS9Q13438 667 aaPredicted RBP13.68□□□□□ -0.22
SNORD3D-201ENST00000619178 DDX46Q7L014 1031 aaKnown RBP13.68□□□□□ -0.22
SNORD3D-201ENST00000619178 JARID2Q92833 1246 aaPredicted RBP13.68□□□□□ -0.22
SNORD3D-201ENST00000619178 SPON1Q9HCB6 807 aa13.68□□□□□ -0.22
SNORD3D-201ENST00000619178 PSDA5PKW4 1024 aaPredicted RBP13.67□□□□□ -0.22
SNORD3D-201ENST00000619178 RAB11FIP3O75154 756 aa13.67□□□□□ -0.22
SNORD3D-201ENST00000619178 IGHMBP2P38935 993 aaKnown RBP13.67□□□□□ -0.22
SNORD3D-201ENST00000619178 POLA2Q14181 598 aa13.67□□□□□ -0.22
SNORD3D-201ENST00000619178 TMC4Q7Z404 712 aa13.67□□□□□ -0.22
SNORD3D-201ENST00000619178 RBM17Q96I25 401 aaKnown RBP13.67□□□□□ -0.22
SNORD3D-201ENST00000619178 KAZALD1Q96I82 304 aa13.67□□□□□ -0.22
SNORD3D-201ENST00000619178 MPHOSPH8Q99549 860 aa13.67□□□□□ -0.22
SNORD3D-201ENST00000619178 TMX4Q9H1E5 349 aaPredicted RBP13.67□□□□□ -0.22
SNORD3D-201ENST00000619178 ABCC12Q96J65 1359 aa13.67□□□□□ -0.22
SNORD3D-201ENST00000619178 ARFGEF1Q9Y6D6 1849 aa13.67□□□□□ -0.22
SNORD3D-201ENST00000619178 H0YIN7 160 aa13.66□□□□□ -0.22
SNORD3D-201ENST00000619178 ZBTB7AO95365 584 aa13.66□□□□□ -0.22
SNORD3D-201ENST00000619178 ITGA6P23229 1130 aa13.66□□□□□ -0.22
SNORD3D-201ENST00000619178 ALDH1B1P30837 517 aa13.66□□□□□ -0.22
SNORD3D-201ENST00000619178 COPRSQ9NQ92 184 aa13.66□□□□□ -0.22
SNORD3D-201ENST00000619178 LRRC37AA6NMS7 1700 aa13.66□□□□□ -0.22
SNORD3D-201ENST00000619178 ARAP2Q8WZ64 1704 aa13.66□□□□□ -0.22
SNORD3D-201ENST00000619178 CHD4Q14839 1912 aa13.66□□□□□ -0.22
SNORD3D-201ENST00000619178 C10orf71Q711Q0 1435 aa13.65□□□□□ -0.22
SNORD3D-201ENST00000619178 PNMA6EA0A0J9YXQ4 647 aa13.65□□□□□ -0.22
SNORD3D-201ENST00000619178 SURF6O75683 361 aaKnown RBP13.65□□□□□ -0.22
SNORD3D-201ENST00000619178 ANKRD18AQ8IVF6 992 aa13.65□□□□□ -0.22
SNORD3D-201ENST00000619178 DCTPP1Q9H773 170 aa13.65□□□□□ -0.22
SNORD3D-201ENST00000619178 ATF5Q9Y2D1 282 aaPredicted RBP13.65□□□□□ -0.22
SNORD3D-201ENST00000619178 LRP5O75197 1615 aa13.64□□□□□ -0.23
SNORD3D-201ENST00000619178 CIAO1O76071 339 aa13.64□□□□□ -0.23
SNORD3D-201ENST00000619178 NPR1P16066 1061 aa13.64□□□□□ -0.23
SNORD3D-201ENST00000619178 FAM161AQ3B820 660 aa13.64□□□□□ -0.23
SNORD3D-201ENST00000619178 EPHA10Q5JZY3 1008 aa13.64□□□□□ -0.23
SNORD3D-201ENST00000619178 B4GALNT3Q6L9W6 998 aa13.64□□□□□ -0.23
SNORD3D-201ENST00000619178 SYNE4Q8N205 404 aa13.64□□□□□ -0.23
SNORD3D-201ENST00000619178 KIF1BPQ96EK5 621 aa13.64□□□□□ -0.23
SNORD3D-201ENST00000619178 GREM2Q9H772 168 aa13.64□□□□□ -0.23
SNORD3D-201ENST00000619178 CNNM1Q9NRU3 951 aa13.64□□□□□ -0.23
SNORD3D-201ENST00000619178 NOP58Q9Y2X3 529 aaKnown RBP13.64□□□□□ -0.23
SNORD3D-201ENST00000619178 KLRG2A4D1S0 409 aaPredicted RBP13.63□□□□□ -0.23
SNORD3D-201ENST00000619178 IL15P40933 162 aaPredicted RBP13.63□□□□□ -0.23
SNORD3D-201ENST00000619178 TGFB2P61812 414 aa13.63□□□□□ -0.23
SNORD3D-201ENST00000619178 CRY2Q49AN0 593 aa13.63□□□□□ -0.23
SNORD3D-201ENST00000619178 LDHAL6AQ6ZMR3 332 aa13.63□□□□□ -0.23
SNORD3D-201ENST00000619178 SIRT2Q8IXJ6 389 aa13.63□□□□□ -0.23
SNORD3D-201ENST00000619178 SMC5Q8IY18 1101 aa13.63□□□□□ -0.23
SNORD3D-201ENST00000619178 MASTLQ96GX5 879 aa13.63□□□□□ -0.23
SNORD3D-201ENST00000619178 CRAMP1Q96RY5 1269 aa13.63□□□□□ -0.23
SNORD3D-201ENST00000619178 LRRCC1Q9C099 1032 aa13.63□□□□□ -0.23
SNORD3D-201ENST00000619178 PDGFDQ9GZP0 370 aaPredicted RBP13.63□□□□□ -0.23
SNORD3D-201ENST00000619178 KIAA1551Q9HCM1 1747 aa13.63□□□□□ -0.23
SNORD3D-201ENST00000619178 MROH5Q6ZUA9 1318 aa13.63□□□□□ -0.23
SNORD3D-201ENST00000619178 EYA2O00167 538 aa13.62□□□□□ -0.23
SNORD3D-201ENST00000619178 BBOX1O75936 387 aa13.62□□□□□ -0.23
SNORD3D-201ENST00000619178 HOXA10P31260 410 aaPredicted RBP13.62□□□□□ -0.23
SNORD3D-201ENST00000619178 RPS8P62241 208 aaKnown RBP13.62□□□□□ -0.23
SNORD3D-201ENST00000619178 STYK1Q6J9G0 422 aa13.62□□□□□ -0.23
SNORD3D-201ENST00000619178 CNKSR1Q969H4 720 aa13.62□□□□□ -0.23
SNORD3D-201ENST00000619178 AKAP2Q9Y2D5 859 aa13.62□□□□□ -0.23
SNORD3D-201ENST00000619178 CD2APQ9Y5K6 639 aa13.62□□□□□ -0.23
SNORD3D-201ENST00000619178 SLX4Q8IY92 1834 aa13.62□□□□□ -0.23
SNORD3D-201ENST00000619178 PTPN12Q05209 780 aaKnown RBP13.61□□□□□ -0.23
SNORD3D-201ENST00000619178 GRAPQ13588 217 aa13.61□□□□□ -0.23
SNORD3D-201ENST00000619178 GRIPAP1Q4V328 841 aa13.61□□□□□ -0.23
SNORD3D-201ENST00000619178 C2CD5Q86YS7 1000 aa13.61□□□□□ -0.23
SNORD3D-201ENST00000619178 CLASRPQ8N2M8 674 aaKnown RBP13.61□□□□□ -0.23
SNORD3D-201ENST00000619178 GRAPLQ8TC17 118 aaPredicted RBP13.61□□□□□ -0.23
SNORD3D-201ENST00000619178 CCDC85AQ96PX6 553 aaPredicted RBP13.61□□□□□ -0.23
SNORD3D-201ENST00000619178 ANKRD2Q9GZV1 360 aa13.61□□□□□ -0.23
SNORD3D-201ENST00000619178 CEP126Q9P2H0 1117 aa13.61□□□□□ -0.23
SNORD3D-201ENST00000619178 CCDC88AQ3V6T2 1871 aa13.61□□□□□ -0.23
SNORD3D-201ENST00000619178 KDM2BQ8NHM5 1336 aa13.61□□□□□ -0.23
SNORD3D-201ENST00000619178 MYH7P12883 1935 aa13.6□□□□□ -0.23
SNORD3D-201ENST00000619178 IGHDP01880 384 aa13.6□□□□□ -0.23
SNORD3D-201ENST00000619178 SRGNP10124 158 aa13.6□□□□□ -0.23
SNORD3D-201ENST00000619178 RFX5P48382 616 aaPredicted RBP13.6□□□□□ -0.23
SNORD3D-201ENST00000619178 ANKRD45Q5TZF3 282 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms