RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 ZNF831Q5JPB2 1677 aa26.28■■□□□ 1.8
POLR2J3-220ENST00000613744 GNPATO15228 680 aa26.27■■□□□ 1.8
POLR2J3-220ENST00000613744 SDSP20132 328 aa26.27■■□□□ 1.8
POLR2J3-220ENST00000613744 FGD1P98174 961 aa26.27■■□□□ 1.8
POLR2J3-220ENST00000613744 AMIGO3Q86WK7 504 aa26.27■■□□□ 1.8
POLR2J3-220ENST00000613744 RPAP2Q8IXW5 612 aaPredicted RBP26.26■■□□□ 1.79
POLR2J3-220ENST00000613744 CHMP4AQ9BY43 222 aa26.26■■□□□ 1.79
POLR2J3-220ENST00000613744 FLIIQ13045 1269 aa26.26■■□□□ 1.79
POLR2J3-220ENST00000613744 LRP10Q7Z4F1 713 aa26.26■■□□□ 1.79
POLR2J3-220ENST00000613744 XAGE3Q8WTP9 111 aa26.26■■□□□ 1.79
POLR2J3-220ENST00000613744 CICQ96RK0 1608 aaPredicted RBP26.25■■□□□ 1.79
POLR2J3-220ENST00000613744 C4BP0C0L5 1744 aa26.25■■□□□ 1.79
POLR2J3-220ENST00000613744 COPS6Q7L5N1 327 aa26.25■■□□□ 1.79
POLR2J3-220ENST00000613744 ANKRD44Q8N8A2 993 aa26.25■■□□□ 1.79
POLR2J3-220ENST00000613744 TMEM87AQ8NBN3 555 aa26.25■■□□□ 1.79
POLR2J3-220ENST00000613744 TMX3Q96JJ7 454 aa26.25■■□□□ 1.79
POLR2J3-220ENST00000613744 AK7Q96M32 723 aa26.25■■□□□ 1.79
POLR2J3-220ENST00000613744 HYPKQ9NX55 129 aa26.25■■□□□ 1.79
POLR2J3-220ENST00000613744 A0A0U1RQG5 324 aaPredicted RBP26.24■■□□□ 1.79
POLR2J3-220ENST00000613744 CBX1P83916 185 aa26.24■■□□□ 1.79
POLR2J3-220ENST00000613744 FEZ1Q99689 392 aa26.24■■□□□ 1.79
POLR2J3-220ENST00000613744 CNTNAP4Q9C0A0 1308 aa26.24■■□□□ 1.79
POLR2J3-220ENST00000613744 PDCL2Q8N4E4 241 aa26.24■■□□□ 1.79
POLR2J3-220ENST00000613744 BCL2L12Q9HB09 334 aa26.24■■□□□ 1.79
POLR2J3-220ENST00000613744 ZNF827Q17R98 1081 aa26.23■■□□□ 1.79
POLR2J3-220ENST00000613744 TTLL7Q6ZT98 887 aa26.23■■□□□ 1.79
POLR2J3-220ENST00000613744 ANKRD7Q92527 254 aa26.23■■□□□ 1.79
POLR2J3-220ENST00000613744 PTPRCP08575 1304 aa26.23■■□□□ 1.79
POLR2J3-220ENST00000613744 CHAF1AQ13111 956 aaPredicted RBP26.23■■□□□ 1.79
POLR2J3-220ENST00000613744 IL17RAQ96F46 866 aa26.23■■□□□ 1.79
POLR2J3-220ENST00000613744 ANAPC15P60006 121 aa26.22■■□□□ 1.79
POLR2J3-220ENST00000613744 ATP2B3Q16720 1220 aa26.22■■□□□ 1.79
POLR2J3-220ENST00000613744 RGPD3A6NKT7 1758 aaPredicted RBP26.22■■□□□ 1.79
POLR2J3-220ENST00000613744 RGPD4Q7Z3J3 1758 aa26.22■■□□□ 1.79
POLR2J3-220ENST00000613744 ATP10DQ9P241 1426 aa26.21■■□□□ 1.79
POLR2J3-220ENST00000613744 F6X3S4 739 aa26.21■■□□□ 1.79
POLR2J3-220ENST00000613744 CCDC183Q5T5S1 534 aa26.21■■□□□ 1.79
POLR2J3-220ENST00000613744 RC3H1Q5TC82 1133 aaKnown RBP26.21■■□□□ 1.79
POLR2J3-220ENST00000613744 TBC1D2BQ9UPU7 963 aa26.21■■□□□ 1.79
POLR2J3-220ENST00000613744 IL6STP40189 918 aaPredicted RBP26.2■■□□□ 1.78
POLR2J3-220ENST00000613744 EIF5P55010 431 aaKnown RBP26.2■■□□□ 1.78
POLR2J3-220ENST00000613744 SYCP1Q15431 976 aa26.2■■□□□ 1.78
POLR2J3-220ENST00000613744 SLC4A10Q6U841 1118 aa26.2■■□□□ 1.78
POLR2J3-220ENST00000613744 OSBPL3Q9H4L5 887 aa26.2■■□□□ 1.78
POLR2J3-220ENST00000613744 ADCY5O95622 1261 aa26.19■■□□□ 1.78
POLR2J3-220ENST00000613744 RTCBQ9Y3I0 505 aaKnown RBP26.19■■□□□ 1.78
POLR2J3-220ENST00000613744 CTIFO43310 598 aaKnown RBP26.19■■□□□ 1.78
POLR2J3-220ENST00000613744 RPS6KA4O75676 772 aa26.19■■□□□ 1.78
POLR2J3-220ENST00000613744 TFCP2L1Q9NZI6 479 aa26.19■■□□□ 1.78
POLR2J3-220ENST00000613744 MCCP23508 829 aa26.18■■□□□ 1.78
POLR2J3-220ENST00000613744 ZBTB3Q9H5J0 574 aa26.18■■□□□ 1.78
POLR2J3-220ENST00000613744 WDR33Q9C0J8 1336 aaKnown RBP26.18■■□□□ 1.78
POLR2J3-220ENST00000613744 PI4KAP2A4QPH2 592 aa26.18■■□□□ 1.78
POLR2J3-220ENST00000613744 NEK4P51957 841 aa26.18■■□□□ 1.78
POLR2J3-220ENST00000613744 PI4KAP1Q8N8J0 262 aa26.18■■□□□ 1.78
POLR2J3-220ENST00000613744 AKT1S1Q96B36 256 aa26.18■■□□□ 1.78
POLR2J3-220ENST00000613744 CACNA1FO60840 1977 aa26.17■■□□□ 1.78
POLR2J3-220ENST00000613744 USP25Q9UHP3 1055 aa26.17■■□□□ 1.78
POLR2J3-220ENST00000613744 COL15A1P39059 1388 aa26.17■■□□□ 1.78
POLR2J3-220ENST00000613744 RREB1Q92766 1687 aa26.17■■□□□ 1.78
POLR2J3-220ENST00000613744 DZIP3Q86Y13 1208 aaKnown RBP26.16■■□□□ 1.78
POLR2J3-220ENST00000613744 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.16■■□□□ 1.78
POLR2J3-220ENST00000613744 KDM4AO75164 1064 aa26.16■■□□□ 1.78
POLR2J3-220ENST00000613744 KIAA1524Q8TCG1 905 aa26.16■■□□□ 1.78
POLR2J3-220ENST00000613744 RIC3Q7Z5B4 369 aa26.15■■□□□ 1.78
POLR2J3-220ENST00000613744 C16orf71Q8IYS4 520 aaPredicted RBP26.15■■□□□ 1.78
POLR2J3-220ENST00000613744 EPB41L2O43491 1005 aaKnown RBP26.15■■□□□ 1.78
POLR2J3-220ENST00000613744 MX1P20591 662 aa26.15■■□□□ 1.78
POLR2J3-220ENST00000613744 ANKRD13DQ6ZTN6 518 aa26.15■■□□□ 1.78
POLR2J3-220ENST00000613744 ARHGEF1Q92888 912 aaKnown RBP26.15■■□□□ 1.78
POLR2J3-220ENST00000613744 TTC12Q9H892 705 aaPredicted RBP26.15■■□□□ 1.78
POLR2J3-220ENST00000613744 MAP3K2Q9Y2U5 619 aa26.15■■□□□ 1.78
POLR2J3-220ENST00000613744 NUP188Q5SRE5 1749 aa26.14■■□□□ 1.78
POLR2J3-220ENST00000613744 CHAMP1Q96JM3 812 aa26.14■■□□□ 1.77
POLR2J3-220ENST00000613744 ADCY9O60503 1353 aa26.14■■□□□ 1.77
POLR2J3-220ENST00000613744 TRAPPC3LQ5T215 181 aa26.13■■□□□ 1.77
POLR2J3-220ENST00000613744 KIF6Q6ZMV9 814 aa26.13■■□□□ 1.77
POLR2J3-220ENST00000613744 TSC1Q92574 1164 aa26.13■■□□□ 1.77
POLR2J3-220ENST00000613744 OGFRQ9NZT2 677 aa26.13■■□□□ 1.77
POLR2J3-220ENST00000613744 SRP68Q9UHB9 627 aaKnown RBP26.13■■□□□ 1.77
POLR2J3-220ENST00000613744 USP48Q86UV5 1035 aa26.13■■□□□ 1.77
POLR2J3-220ENST00000613744 UBR3Q6ZT12 1888 aa26.12■■□□□ 1.77
POLR2J3-220ENST00000613744 DDX58O95786 925 aaKnown RBP26.12■■□□□ 1.77
POLR2J3-220ENST00000613744 GABPB1Q06547 395 aaPredicted RBP26.12■■□□□ 1.77
POLR2J3-220ENST00000613744 HLFQ16534 295 aa26.12■■□□□ 1.77
POLR2J3-220ENST00000613744 CEP85Q6P2H3 762 aa26.12■■□□□ 1.77
POLR2J3-220ENST00000613744 KSR2Q6VAB6 950 aa26.12■■□□□ 1.77
POLR2J3-220ENST00000613744 GOLGA6L6A8MZA4 724 aa26.11■■□□□ 1.77
POLR2J3-220ENST00000613744 SLC15A2Q16348 729 aa26.11■■□□□ 1.77
POLR2J3-220ENST00000613744 JARID2Q92833 1246 aaPredicted RBP26.11■■□□□ 1.77
POLR2J3-220ENST00000613744 ZNF830Q96NB3 372 aaPredicted RBP26.11■■□□□ 1.77
POLR2J3-220ENST00000613744 STK32BQ9NY57 414 aa26.11■■□□□ 1.77
POLR2J3-220ENST00000613744 RFC4P35249 363 aa26.1■■□□□ 1.77
POLR2J3-220ENST00000613744 FOXD4L5Q5VV16 416 aaPredicted RBP26.1■■□□□ 1.77
POLR2J3-220ENST00000613744 PLBD2Q8NHP8 589 aa26.1■■□□□ 1.77
POLR2J3-220ENST00000613744 FOXD4L4Q8WXT5 416 aaPredicted RBP26.1■■□□□ 1.77
POLR2J3-220ENST00000613744 OTUD7AQ8TE49 926 aaPredicted RBP26.1■■□□□ 1.77
POLR2J3-220ENST00000613744 RPAP1Q9BWH6 1393 aaPredicted RBP26.1■■□□□ 1.77
POLR2J3-220ENST00000613744 MAP3K15Q6ZN16 1313 aa26.09■■□□□ 1.77
POLR2J3-220ENST00000613744 RIOK3O14730 519 aaKnown RBP26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms