RNA–Protein interactions for RNA: ENST00000613223.1

SEMA6C-209, Transcript of semaphorin 6C, humanhuman

TSL 5 BASIC

Gene SEMA6C, Length 1,950 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-209ENST00000613223 ZNF609O15014 1411 aa21.64■■□□□ 1.05
SEMA6C-209ENST00000613223 MCM4P33991 863 aa21.63■■□□□ 1.05
SEMA6C-209ENST00000613223 CRKLP46109 303 aaKnown RBP21.63■■□□□ 1.05
SEMA6C-209ENST00000613223 LRRC24Q50LG9 513 aa21.63■■□□□ 1.05
SEMA6C-209ENST00000613223 FOXD4L1Q9NU39 408 aa21.63■■□□□ 1.05
SEMA6C-209ENST00000613223 TBC1D2BQ9UPU7 963 aa21.63■■□□□ 1.05
SEMA6C-209ENST00000613223 RFX7Q2KHR2 1363 aa21.63■■□□□ 1.05
SEMA6C-209ENST00000613223 SNRKQ9NRH2 765 aa21.63■■□□□ 1.05
SEMA6C-209ENST00000613223 NMIQ13287 307 aaPredicted RBP21.62■■□□□ 1.05
SEMA6C-209ENST00000613223 ITPK1Q13572 414 aa21.61■■□□□ 1.05
SEMA6C-209ENST00000613223 ZNF34Q8IZ26 560 aa21.61■■□□□ 1.05
SEMA6C-209ENST00000613223 HAUS7Q99871 368 aa21.61■■□□□ 1.05
SEMA6C-209ENST00000613223 ZNF831Q5JPB2 1677 aa21.61■■□□□ 1.05
SEMA6C-209ENST00000613223 IFIT5Q13325 482 aaKnown RBP21.61■■□□□ 1.05
SEMA6C-209ENST00000613223 MYH3P11055 1940 aa21.6■■□□□ 1.05
SEMA6C-209ENST00000613223 KCNQ2O43526 872 aa21.6■■□□□ 1.05
SEMA6C-209ENST00000613223 RAB3GAP1Q15042 981 aa21.6■■□□□ 1.05
SEMA6C-209ENST00000613223 FAM43AQ8N2R8 423 aa21.6■■□□□ 1.05
SEMA6C-209ENST00000613223 FAM227BQ96M60 508 aa21.6■■□□□ 1.05
SEMA6C-209ENST00000613223 PUS3Q9BZE2 481 aaKnown RBP21.6■■□□□ 1.05
SEMA6C-209ENST00000613223 TRMT112Q9UI30 125 aaKnown RBP21.6■■□□□ 1.05
SEMA6C-209ENST00000613223 SNX14Q9Y5W7 946 aa21.6■■□□□ 1.05
SEMA6C-209ENST00000613223 CCDC171Q6TFL3 1326 aa21.6■■□□□ 1.05
SEMA6C-209ENST00000613223 NEUROD6Q96NK8 337 aa21.59■■□□□ 1.05
SEMA6C-209ENST00000613223 UBN2Q6ZU65 1347 aa21.59■■□□□ 1.05
SEMA6C-209ENST00000613223 COL5A3P25940 1745 aaPredicted RBP21.59■■□□□ 1.05
SEMA6C-209ENST00000613223 IRS4O14654 1257 aaPredicted RBP21.59■■□□□ 1.05
SEMA6C-209ENST00000613223 CTSWP56202 376 aa21.59■■□□□ 1.05
SEMA6C-209ENST00000613223 TAF7LQ5H9L4 462 aa21.59■■□□□ 1.05
SEMA6C-209ENST00000613223 SYNE4Q8N205 404 aa21.59■■□□□ 1.05
SEMA6C-209ENST00000613223 CEP126Q9P2H0 1117 aa21.59■■□□□ 1.05
SEMA6C-209ENST00000613223 MED23Q9ULK4 1368 aa21.59■■□□□ 1.05
SEMA6C-209ENST00000613223 MYH14Q7Z406 1995 aaKnown RBP21.58■■□□□ 1.05
SEMA6C-209ENST00000613223 PTH1RQ03431 593 aa21.58■■□□□ 1.05
SEMA6C-209ENST00000613223 TTLL11Q8NHH1 800 aa21.58■■□□□ 1.05
SEMA6C-209ENST00000613223 USP21Q9UK80 565 aa21.58■■□□□ 1.05
SEMA6C-209ENST00000613223 A0A0D9SFI3 127 aa21.57■■□□□ 1.04
SEMA6C-209ENST00000613223 A0A1B0GUL7 405 aa21.57■■□□□ 1.04
SEMA6C-209ENST00000613223 EDC3Q96F86 508 aaKnown RBP21.57■■□□□ 1.04
SEMA6C-209ENST00000613223 DNAJC2Q99543 621 aaKnown RBP21.57■■□□□ 1.04
SEMA6C-209ENST00000613223 CWC22Q9HCG8 908 aaKnown RBP21.57■■□□□ 1.04
SEMA6C-209ENST00000613223 THSD7AQ9UPZ6 1657 aa21.57■■□□□ 1.04
SEMA6C-209ENST00000613223 TIMM10P62072 90 aa21.57■■□□□ 1.04
SEMA6C-209ENST00000613223 KCNB2Q92953 911 aa21.57■■□□□ 1.04
SEMA6C-209ENST00000613223 CCDC85AQ96PX6 553 aaPredicted RBP21.57■■□□□ 1.04
SEMA6C-209ENST00000613223 UPF3BQ9BZI7 483 aaKnown RBP21.57■■□□□ 1.04
SEMA6C-209ENST00000613223 RASEFQ8IZ41 740 aa21.56■■□□□ 1.04
SEMA6C-209ENST00000613223 TNPO1Q92973 898 aaKnown RBP21.56■■□□□ 1.04
SEMA6C-209ENST00000613223 TMX3Q96JJ7 454 aa21.56■■□□□ 1.04
SEMA6C-209ENST00000613223 AKAP2Q9Y2D5 859 aa21.56■■□□□ 1.04
SEMA6C-209ENST00000613223 PDE8AO60658 829 aa21.56■■□□□ 1.04
SEMA6C-209ENST00000613223 CAMTA2O94983 1202 aa21.56■■□□□ 1.04
SEMA6C-209ENST00000613223 ITGA6P23229 1130 aa21.56■■□□□ 1.04
SEMA6C-209ENST00000613223 AK7Q96M32 723 aa21.56■■□□□ 1.04
SEMA6C-209ENST00000613223 GREM2Q9H772 168 aa21.56■■□□□ 1.04
SEMA6C-209ENST00000613223 TICAM2Q86XR7 235 aa21.55■■□□□ 1.04
SEMA6C-209ENST00000613223 MAP4K1Q92918 833 aa21.55■■□□□ 1.04
SEMA6C-209ENST00000613223 ANKRD18BA2A2Z9 1011 aa21.54■■□□□ 1.04
SEMA6C-209ENST00000613223 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.54■■□□□ 1.04
SEMA6C-209ENST00000613223 SPEF2Q9C093 1822 aa21.54■■□□□ 1.04
SEMA6C-209ENST00000613223 RIC1Q4ADV7 1423 aa21.54■■□□□ 1.04
SEMA6C-209ENST00000613223 NECTIN1Q15223 517 aa21.54■■□□□ 1.04
SEMA6C-209ENST00000613223 PARP10Q53GL7 1025 aa21.54■■□□□ 1.04
SEMA6C-209ENST00000613223 PRPF40BQ6NWY9 871 aaKnown RBP21.54■■□□□ 1.04
SEMA6C-209ENST00000613223 KBTBD3Q8NAB2 608 aa21.54■■□□□ 1.04
SEMA6C-209ENST00000613223 RBM8AQ9Y5S9 174 aaKnown RBP21.54■■□□□ 1.04
SEMA6C-209ENST00000613223 NDUFB9Q9Y6M9 179 aa21.54■■□□□ 1.04
SEMA6C-209ENST00000613223 FSD2A1L4K1 749 aa21.53■■□□□ 1.04
SEMA6C-209ENST00000613223 CUL4AQ13619 759 aa21.53■■□□□ 1.04
SEMA6C-209ENST00000613223 CERKQ8TCT0 537 aa21.53■■□□□ 1.04
SEMA6C-209ENST00000613223 GBP4Q96PP9 640 aa21.53■■□□□ 1.04
SEMA6C-209ENST00000613223 ANO8Q9HCE9 1232 aaPredicted RBP21.53■■□□□ 1.04
SEMA6C-209ENST00000613223 SH3TC1Q8TE82 1336 aa21.52■■□□□ 1.04
SEMA6C-209ENST00000613223 DDX11L8A8MPP1 907 aa21.52■■□□□ 1.04
SEMA6C-209ENST00000613223 NUCB2P80303 420 aa21.52■■□□□ 1.04
SEMA6C-209ENST00000613223 DDX46Q7L014 1031 aaKnown RBP21.52■■□□□ 1.04
SEMA6C-209ENST00000613223 PAG1Q9NWQ8 432 aa21.52■■□□□ 1.04
SEMA6C-209ENST00000613223 RIPOR2Q9Y4F9 1068 aa21.52■■□□□ 1.04
SEMA6C-209ENST00000613223 LRP5O75197 1615 aa21.52■■□□□ 1.04
SEMA6C-209ENST00000613223 GOLGA6L3A6NEY3 463 aa21.52■■□□□ 1.04
SEMA6C-209ENST00000613223 SUSD4Q5VX71 490 aa21.52■■□□□ 1.04
SEMA6C-209ENST00000613223 ZGPATQ8N5A5 531 aaKnown RBP21.52■■□□□ 1.04
SEMA6C-209ENST00000613223 TTC14Q96N46 770 aa21.52■■□□□ 1.04
SEMA6C-209ENST00000613223 UTP14AQ9BVJ6 771 aaKnown RBP21.52■■□□□ 1.04
SEMA6C-209ENST00000613223 TM6SF1Q9BZW5 370 aa21.52■■□□□ 1.04
SEMA6C-209ENST00000613223 BCORQ6W2J9 1755 aa21.52■■□□□ 1.04
SEMA6C-209ENST00000613223 TRAK2O60296 914 aa21.51■■□□□ 1.03
SEMA6C-209ENST00000613223 IFIT1P09914 478 aaKnown RBP21.51■■□□□ 1.03
SEMA6C-209ENST00000613223 ZKSCAN1P17029 563 aaPredicted RBP21.51■■□□□ 1.03
SEMA6C-209ENST00000613223 KCNJ4P48050 445 aa21.51■■□□□ 1.03
SEMA6C-209ENST00000613223 LDHAL6AQ6ZMR3 332 aa21.51■■□□□ 1.03
SEMA6C-209ENST00000613223 ZNF589Q86UQ0 364 aaPredicted RBP21.51■■□□□ 1.03
SEMA6C-209ENST00000613223 NHSQ6T4R5 1651 aa21.51■■□□□ 1.03
SEMA6C-209ENST00000613223 GOLIM4O00461 696 aa21.5■■□□□ 1.03
SEMA6C-209ENST00000613223 CREB3L3Q68CJ9 461 aa21.5■■□□□ 1.03
SEMA6C-209ENST00000613223 LINC00116Q8NCU8 138 aa21.5■■□□□ 1.03
SEMA6C-209ENST00000613223 INTS4Q96HW7 963 aaKnown RBP21.5■■□□□ 1.03
SEMA6C-209ENST00000613223 SSFA2P28290 1259 aa21.5■■□□□ 1.03
SEMA6C-209ENST00000613223 METTL24Q5JXM2 366 aa21.5■■□□□ 1.03
SEMA6C-209ENST00000613223 CCDC158Q5M9N0 1113 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms