RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 H7C1W4 665 aa19.73■□□□□ 0.75
CNOT3-208ENST00000613073 IGSF3O75054 1194 aa19.73■□□□□ 0.75
CNOT3-208ENST00000613073 ADAMTS2O95450 1211 aa19.73■□□□□ 0.75
CNOT3-208ENST00000613073 NUCB2P80303 420 aa19.73■□□□□ 0.75
CNOT3-208ENST00000613073 EDC3Q96F86 508 aaKnown RBP19.73■□□□□ 0.75
CNOT3-208ENST00000613073 ATG3Q9NT62 314 aa19.73■□□□□ 0.75
CNOT3-208ENST00000613073 FOXO4P98177 505 aa19.72■□□□□ 0.75
CNOT3-208ENST00000613073 RASEFQ8IZ41 740 aa19.72■□□□□ 0.75
CNOT3-208ENST00000613073 FAM227BQ96M60 508 aa19.72■□□□□ 0.75
CNOT3-208ENST00000613073 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.72■□□□□ 0.75
CNOT3-208ENST00000613073 NDUFB9Q9Y6M9 179 aa19.72■□□□□ 0.75
CNOT3-208ENST00000613073 TNS2Q63HR2 1409 aa19.72■□□□□ 0.75
CNOT3-208ENST00000613073 PTH1RQ03431 593 aa19.72■□□□□ 0.75
CNOT3-208ENST00000613073 ROBO1Q9Y6N7 1651 aa19.72■□□□□ 0.75
CNOT3-208ENST00000613073 TPRNQ4KMQ1 711 aa19.72■□□□□ 0.75
CNOT3-208ENST00000613073 TNNI3KQ59H18 835 aa19.72■□□□□ 0.75
CNOT3-208ENST00000613073 ZNF710Q8N1W2 664 aa19.72■□□□□ 0.75
CNOT3-208ENST00000613073 RUFY2Q8WXA3 655 aa19.72■□□□□ 0.75
CNOT3-208ENST00000613073 DBNLQ9UJU6 430 aaKnown RBP19.72■□□□□ 0.75
CNOT3-208ENST00000613073 SNX14Q9Y5W7 946 aa19.72■□□□□ 0.75
CNOT3-208ENST00000613073 FPGT-TNNI3KV9GXZ4 949 aa19.72■□□□□ 0.75
CNOT3-208ENST00000613073 SPDYE4A6NLX3 237 aa19.71■□□□□ 0.75
CNOT3-208ENST00000613073 KIAA2012Q0VF49 1180 aa19.71■□□□□ 0.75
CNOT3-208ENST00000613073 LRSAM1Q6UWE0 723 aa19.71■□□□□ 0.75
CNOT3-208ENST00000613073 PAPPAQ13219 1627 aa19.71■□□□□ 0.75
CNOT3-208ENST00000613073 FOXD4L6Q3SYB3 417 aaPredicted RBP19.71■□□□□ 0.75
CNOT3-208ENST00000613073 FOXD4L3Q6VB84 417 aaPredicted RBP19.71■□□□□ 0.75
CNOT3-208ENST00000613073 FSD1Q9BTV5 496 aa19.71■□□□□ 0.75
CNOT3-208ENST00000613073 A0A0G2JS52 829 aa19.7■□□□□ 0.74
CNOT3-208ENST00000613073 ATP2B3Q16720 1220 aa19.7■□□□□ 0.74
CNOT3-208ENST00000613073 PPP4R3BQ5MIZ7 849 aa19.7■□□□□ 0.74
CNOT3-208ENST00000613073 LARP6Q9BRS8 491 aaKnown RBP19.7■□□□□ 0.74
CNOT3-208ENST00000613073 EXOC5O00471 708 aa19.69■□□□□ 0.74
CNOT3-208ENST00000613073 MCM5P33992 734 aa19.69■□□□□ 0.74
CNOT3-208ENST00000613073 NMIQ13287 307 aaPredicted RBP19.69■□□□□ 0.74
CNOT3-208ENST00000613073 UTP14CQ5TAP6 766 aaKnown RBP19.69■□□□□ 0.74
CNOT3-208ENST00000613073 CCDC191Q8NCU4 936 aa19.69■□□□□ 0.74
CNOT3-208ENST00000613073 ZNF594Q96JF6 807 aaPredicted RBP19.69■□□□□ 0.74
CNOT3-208ENST00000613073 MYRIPQ8NFW9 859 aa19.69■□□□□ 0.74
CNOT3-208ENST00000613073 BBXQ8WY36 941 aaPredicted RBP19.69■□□□□ 0.74
CNOT3-208ENST00000613073 DBNDD2Q9BQY9 259 aa19.69■□□□□ 0.74
CNOT3-208ENST00000613073 CWC22Q9HCG8 908 aaKnown RBP19.69■□□□□ 0.74
CNOT3-208ENST00000613073 CPA1P15085 419 aa19.68■□□□□ 0.74
CNOT3-208ENST00000613073 MCM2P49736 904 aa19.68■□□□□ 0.74
CNOT3-208ENST00000613073 CCDC85AQ96PX6 553 aaPredicted RBP19.68■□□□□ 0.74
CNOT3-208ENST00000613073 CYP2E1P05181 493 aaPredicted RBP19.68■□□□□ 0.74
CNOT3-208ENST00000613073 PDE4CQ08493 712 aa19.68■□□□□ 0.74
CNOT3-208ENST00000613073 PRPF40BQ6NWY9 871 aaKnown RBP19.68■□□□□ 0.74
CNOT3-208ENST00000613073 COL15A1P39059 1388 aa19.67■□□□□ 0.74
CNOT3-208ENST00000613073 EPB41L2O43491 1005 aaKnown RBP19.67■□□□□ 0.74
CNOT3-208ENST00000613073 A0A0D9SFI3 127 aa19.67■□□□□ 0.74
CNOT3-208ENST00000613073 STARD3NLO95772 234 aa19.67■□□□□ 0.74
CNOT3-208ENST00000613073 ZDHHC9Q9Y397 364 aa19.67■□□□□ 0.74
CNOT3-208ENST00000613073 NUP188Q5SRE5 1749 aa19.67■□□□□ 0.74
CNOT3-208ENST00000613073 NEUROD6Q96NK8 337 aa19.66■□□□□ 0.74
CNOT3-208ENST00000613073 SLC4A9Q96Q91 983 aa19.66■□□□□ 0.74
CNOT3-208ENST00000613073 DNAJC2Q99543 621 aaKnown RBP19.66■□□□□ 0.74
CNOT3-208ENST00000613073 TCIRG1Q13488 830 aa19.66■□□□□ 0.74
CNOT3-208ENST00000613073 NUTM2BA6NNL0 878 aaPredicted RBP19.66■□□□□ 0.74
CNOT3-208ENST00000613073 NUTM2EB1AL46 878 aaPredicted RBP19.66■□□□□ 0.74
CNOT3-208ENST00000613073 LRRC24Q50LG9 513 aa19.66■□□□□ 0.74
CNOT3-208ENST00000613073 KIF6Q6ZMV9 814 aa19.66■□□□□ 0.74
CNOT3-208ENST00000613073 NUTM2AQ8IVF1 878 aaPredicted RBP19.66■□□□□ 0.74
CNOT3-208ENST00000613073 IL17RAQ96F46 866 aa19.66■□□□□ 0.74
CNOT3-208ENST00000613073 FAM89AQ96GI7 184 aa19.66■□□□□ 0.74
CNOT3-208ENST00000613073 CHGBP05060 677 aa19.65■□□□□ 0.74
CNOT3-208ENST00000613073 CASTP20810 708 aaKnown RBP19.65■□□□□ 0.74
CNOT3-208ENST00000613073 KCNJ4P48050 445 aa19.65■□□□□ 0.74
CNOT3-208ENST00000613073 TIMM10P62072 90 aa19.65■□□□□ 0.74
CNOT3-208ENST00000613073 ATG9AQ7Z3C6 839 aa19.65■□□□□ 0.74
CNOT3-208ENST00000613073 TEX13AQ9BXU3 409 aaPredicted RBP19.65■□□□□ 0.74
CNOT3-208ENST00000613073 DISP2A7MBM2 1401 aa19.65■□□□□ 0.74
CNOT3-208ENST00000613073 COL14A1Q05707 1796 aaKnown RBP19.65■□□□□ 0.74
CNOT3-208ENST00000613073 ADCK5Q3MIX3 580 aa19.65■□□□□ 0.74
CNOT3-208ENST00000613073 TTC12Q9H892 705 aaPredicted RBP19.65■□□□□ 0.74
CNOT3-208ENST00000613073 ITGB4P16144 1822 aa19.64■□□□□ 0.74
CNOT3-208ENST00000613073 GPTP24298 496 aa19.64■□□□□ 0.73
CNOT3-208ENST00000613073 ISCA1Q9BUE6 129 aa19.64■□□□□ 0.73
CNOT3-208ENST00000613073 CCDC171Q6TFL3 1326 aa19.64■□□□□ 0.73
CNOT3-208ENST00000613073 ATP5JP18859 108 aa19.64■□□□□ 0.73
CNOT3-208ENST00000613073 SYNE4Q8N205 404 aa19.64■□□□□ 0.73
CNOT3-208ENST00000613073 HIP1O00291 1037 aa19.63■□□□□ 0.73
CNOT3-208ENST00000613073 CUL4AQ13619 759 aa19.63■□□□□ 0.73
CNOT3-208ENST00000613073 HLFQ16534 295 aa19.63■□□□□ 0.73
CNOT3-208ENST00000613073 PUS3Q9BZE2 481 aaKnown RBP19.63■□□□□ 0.73
CNOT3-208ENST00000613073 TJP1Q07157 1748 aa19.63■□□□□ 0.73
CNOT3-208ENST00000613073 AK2P54819 239 aa19.63■□□□□ 0.73
CNOT3-208ENST00000613073 PIP4K2BP78356 416 aa19.63■□□□□ 0.73
CNOT3-208ENST00000613073 JAKMIP1Q96N16 626 aaKnown RBP19.63■□□□□ 0.73
CNOT3-208ENST00000613073 RBM8AQ9Y5S9 174 aaKnown RBP19.63■□□□□ 0.73
CNOT3-208ENST00000613073 BCL9O00512 1426 aa19.63■□□□□ 0.73
CNOT3-208ENST00000613073 COL16A1Q07092 1604 aaPredicted RBP19.63■□□□□ 0.73
CNOT3-208ENST00000613073 DDX46Q7L014 1031 aaKnown RBP19.62■□□□□ 0.73
CNOT3-208ENST00000613073 ZNF589Q86UQ0 364 aaPredicted RBP19.62■□□□□ 0.73
CNOT3-208ENST00000613073 ZBTB1Q9Y2K1 713 aa19.61■□□□□ 0.73
CNOT3-208ENST00000613073 CYP19A1P11511 503 aaPredicted RBP19.61■□□□□ 0.73
CNOT3-208ENST00000613073 NECTIN1Q15223 517 aa19.61■□□□□ 0.73
CNOT3-208ENST00000613073 ACSBG1Q96GR2 724 aa19.61■□□□□ 0.73
CNOT3-208ENST00000613073 TTC14Q96N46 770 aa19.61■□□□□ 0.73
CNOT3-208ENST00000613073 GDPD2Q9HCC8 539 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms