RNA–Protein interactions for RNA: ENST00000611855.4

CDH4-202, Transcript of cadherin 4, humanhuman

TSL 5 BASIC

Gene CDH4, Length 3,304 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-202ENST00000611855 CEBPAP49715 358 aaPredicted RBP12.96□□□□□ -0.33
CDH4-202ENST00000611855 BRF1Q92994 677 aa12.96□□□□□ -0.33
CDH4-202ENST00000611855 ARHGEF10O15013 1369 aa12.96□□□□□ -0.33
CDH4-202ENST00000611855 H3BQV1 296 aa12.96□□□□□ -0.33
CDH4-202ENST00000611855 GUCY1B3Q02153 619 aa12.96□□□□□ -0.33
CDH4-202ENST00000611855 AIMP1Q12904 312 aaKnown RBP12.96□□□□□ -0.33
CDH4-202ENST00000611855 IFFO2Q5TF58 517 aa12.96□□□□□ -0.33
CDH4-202ENST00000611855 PPP6R1Q9UPN7 881 aa12.96□□□□□ -0.33
CDH4-202ENST00000611855 XRN1Q8IZH2 1706 aaKnown RBP12.96□□□□□ -0.34
CDH4-202ENST00000611855 FLT4P35916 1363 aa12.96□□□□□ -0.34
CDH4-202ENST00000611855 NRKQ7Z2Y5 1582 aa12.95□□□□□ -0.34
CDH4-202ENST00000611855 TOB2Q14106 344 aaPredicted RBP12.95□□□□□ -0.34
CDH4-202ENST00000611855 PROSER3Q2NL68 480 aa12.95□□□□□ -0.34
CDH4-202ENST00000611855 EAF2Q96CJ1 260 aaPredicted RBP12.95□□□□□ -0.34
CDH4-202ENST00000611855 SCAND2PQ9GZW5 306 aaPredicted RBP12.95□□□□□ -0.34
CDH4-202ENST00000611855 ITSN1Q15811 1721 aa12.95□□□□□ -0.34
CDH4-202ENST00000611855 USP6P35125 1406 aa12.95□□□□□ -0.34
CDH4-202ENST00000611855 NPHP3Q7Z494 1330 aa12.95□□□□□ -0.34
CDH4-202ENST00000611855 IGSF1Q8N6C5 1336 aa12.95□□□□□ -0.34
CDH4-202ENST00000611855 TTC21AQ8NDW8 1320 aa12.95□□□□□ -0.34
CDH4-202ENST00000611855 PRAMEF22A3QJZ6 481 aa12.95□□□□□ -0.34
CDH4-202ENST00000611855 SLU7O95391 586 aaKnown RBP12.95□□□□□ -0.34
CDH4-202ENST00000611855 CCDC129Q6ZRS4 1044 aa12.95□□□□□ -0.34
CDH4-202ENST00000611855 ZNF446Q9NWS9 450 aa12.95□□□□□ -0.34
CDH4-202ENST00000611855 BECN2A8MW95 431 aa12.95□□□□□ -0.34
CDH4-202ENST00000611855 TDRD7Q8NHU6 1098 aaKnown RBP12.95□□□□□ -0.34
CDH4-202ENST00000611855 DDX19AQ9NUU7 478 aaKnown RBP12.95□□□□□ -0.34
CDH4-202ENST00000611855 MAP3K2Q9Y2U5 619 aa12.95□□□□□ -0.34
CDH4-202ENST00000611855 CCDC69A6NI79 296 aa12.94□□□□□ -0.34
CDH4-202ENST00000611855 EPB41L2O43491 1005 aaKnown RBP12.94□□□□□ -0.34
CDH4-202ENST00000611855 PDCP20941 246 aa12.94□□□□□ -0.34
CDH4-202ENST00000611855 LRRC8AQ8IWT6 810 aa12.94□□□□□ -0.34
CDH4-202ENST00000611855 LRRN4CLQ8ND94 238 aa12.94□□□□□ -0.34
CDH4-202ENST00000611855 ERO1AQ96HE7 468 aa12.94□□□□□ -0.34
CDH4-202ENST00000611855 GPATCH3Q96I76 525 aa12.94□□□□□ -0.34
CDH4-202ENST00000611855 MAP3K5Q99683 1374 aa12.94□□□□□ -0.34
CDH4-202ENST00000611855 BMS1Q14692 1282 aaKnown RBP12.94□□□□□ -0.34
CDH4-202ENST00000611855 MAP4K1Q92918 833 aa12.94□□□□□ -0.34
CDH4-202ENST00000611855 EVI5LQ96CN4 794 aa12.94□□□□□ -0.34
CDH4-202ENST00000611855 FMNL2Q96PY5 1086 aa12.94□□□□□ -0.34
CDH4-202ENST00000611855 TTC41PQ6P2S7 1318 aa12.94□□□□□ -0.34
CDH4-202ENST00000611855 RAD51AP2Q09MP3 1159 aa12.93□□□□□ -0.34
CDH4-202ENST00000611855 MPRIPQ6WCQ1 1025 aa12.93□□□□□ -0.34
CDH4-202ENST00000611855 TM6SF1Q9BZW5 370 aa12.93□□□□□ -0.34
CDH4-202ENST00000611855 HTATSF1O43719 755 aaKnown RBP12.93□□□□□ -0.34
CDH4-202ENST00000611855 RPS6KB1P23443 525 aa12.93□□□□□ -0.34
CDH4-202ENST00000611855 C10orf67Q8IYJ2 551 aa12.93□□□□□ -0.34
CDH4-202ENST00000611855 HSP90AB4PQ58FF6 505 aa12.93□□□□□ -0.34
CDH4-202ENST00000611855 TAF7LQ5H9L4 462 aa12.93□□□□□ -0.34
CDH4-202ENST00000611855 SEC62Q99442 399 aaKnown RBP12.93□□□□□ -0.34
CDH4-202ENST00000611855 FEZ2Q9UHY8 353 aaPredicted RBP12.93□□□□□ -0.34
CDH4-202ENST00000611855 SBNO1A3KN83 1393 aa12.93□□□□□ -0.34
CDH4-202ENST00000611855 PSMA5P28066 241 aa12.92□□□□□ -0.34
CDH4-202ENST00000611855 IRX3P78415 501 aaPredicted RBP12.92□□□□□ -0.34
CDH4-202ENST00000611855 SLFNL1Q499Z3 407 aa12.92□□□□□ -0.34
CDH4-202ENST00000611855 ARHGAP29Q52LW3 1261 aa12.92□□□□□ -0.34
CDH4-202ENST00000611855 SYT10Q6XYQ8 523 aa12.92□□□□□ -0.34
CDH4-202ENST00000611855 ZCCHC17Q9NP64 241 aaKnown RBP12.92□□□□□ -0.34
CDH4-202ENST00000611855 ELP1O95163 1332 aa12.92□□□□□ -0.34
CDH4-202ENST00000611855 FAM208AQ9UK61 1670 aaKnown RBP12.92□□□□□ -0.34
CDH4-202ENST00000611855 SASH1O94885 1247 aa12.92□□□□□ -0.34
CDH4-202ENST00000611855 HOXC9P31274 260 aa12.92□□□□□ -0.34
CDH4-202ENST00000611855 CCAR1Q8IX12 1150 aaKnown RBP12.92□□□□□ -0.34
CDH4-202ENST00000611855 CYP2C19P33261 490 aa12.91□□□□□ -0.34
CDH4-202ENST00000611855 CCT2P78371 535 aaKnown RBP12.91□□□□□ -0.34
CDH4-202ENST00000611855 HOMER1Q86YM7 354 aa12.91□□□□□ -0.34
CDH4-202ENST00000611855 AOPEPQ8N6M6 819 aa12.91□□□□□ -0.34
CDH4-202ENST00000611855 CHMP4CQ96CF2 233 aa12.91□□□□□ -0.34
CDH4-202ENST00000611855 GOLPH3LQ9H4A5 285 aa12.91□□□□□ -0.34
CDH4-202ENST00000611855 RSPH14Q9UHP6 348 aa12.91□□□□□ -0.34
CDH4-202ENST00000611855 KDRP35968 1356 aa12.91□□□□□ -0.34
CDH4-202ENST00000611855 AKAP12Q02952 1782 aa12.91□□□□□ -0.34
CDH4-202ENST00000611855 PLEKHG3A1L390 1219 aa12.91□□□□□ -0.34
CDH4-202ENST00000611855 CLCN6P51797 869 aa12.91□□□□□ -0.34
CDH4-202ENST00000611855 EIF4A1P60842 406 aaKnown RBP12.91□□□□□ -0.34
CDH4-202ENST00000611855 PTPN21Q16825 1174 aa12.91□□□□□ -0.34
CDH4-202ENST00000611855 KRBA2Q6ZNG9 492 aa12.91□□□□□ -0.34
CDH4-202ENST00000611855 Q6ZUG5 572 aa12.91□□□□□ -0.34
CDH4-202ENST00000611855 SETD1AO15047 1707 aaKnown RBP12.91□□□□□ -0.34
CDH4-202ENST00000611855 ADCY9O60503 1353 aa12.91□□□□□ -0.34
CDH4-202ENST00000611855 G3BP1Q13283 466 aaKnown RBP eCLIP12.91□□□□□ -0.34
CDH4-202ENST00000611855 IQCB1Q15051 598 aa12.91□□□□□ -0.34
CDH4-202ENST00000611855 BICC1Q9H694 974 aaKnown RBP12.91□□□□□ -0.34
CDH4-202ENST00000611855 SEC31AO94979 1220 aaKnown RBP12.9□□□□□ -0.34
CDH4-202ENST00000611855 TEX35Q5T0J7 233 aa12.9□□□□□ -0.34
CDH4-202ENST00000611855 RNF20Q5VTR2 975 aa12.9□□□□□ -0.34
CDH4-202ENST00000611855 SUCLG2Q96I99 432 aa12.9□□□□□ -0.34
CDH4-202ENST00000611855 RICTORQ6R327 1708 aa12.9□□□□□ -0.34
CDH4-202ENST00000611855 TULP2O00295 520 aa12.9□□□□□ -0.34
CDH4-202ENST00000611855 BIN1O00499 593 aa12.9□□□□□ -0.34
CDH4-202ENST00000611855 RESTQ13127 1097 aa12.9□□□□□ -0.34
CDH4-202ENST00000611855 SNW1Q13573 536 aaKnown RBP12.9□□□□□ -0.34
CDH4-202ENST00000611855 ISM2Q6H9L7 571 aa12.9□□□□□ -0.34
CDH4-202ENST00000611855 CHST3Q7LGC8 479 aa12.9□□□□□ -0.34
CDH4-202ENST00000611855 NCOA5Q9HCD5 579 aaKnown RBP12.9□□□□□ -0.34
CDH4-202ENST00000611855 RGPD1P0DJD0 1748 aa12.9□□□□□ -0.34
CDH4-202ENST00000611855 USP31Q70CQ4 1352 aa12.9□□□□□ -0.34
CDH4-202ENST00000611855 TEFQ10587 303 aa12.9□□□□□ -0.35
CDH4-202ENST00000611855 ABTB2Q8N961 1025 aa12.9□□□□□ -0.35
CDH4-202ENST00000611855 NRXN3Q9Y4C0 1643 aa12.9□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms