RNA–Protein interactions for RNA: ENST00000601236.1

U2AF1L4-221, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, human

TSL 3

Gene U2AF1L4, Length 455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1L4-221	ENST00000601236	ACE	P12821	1306 aa		13.74	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	IKBKB	O14920	756 aa		13.74	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	AP5Z1	O43299	807 aa		13.74	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	DDX58	O95786	925 aa	Known RBP	13.74	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	FGD1	P98174	961 aa		13.74	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	LRRFIP1	Q32MZ4	808 aa	Known RBP	13.74	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	CYB5RL	Q6IPT4	315 aa		13.74	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	CWC27	Q6UX04	472 aa	Known RBP	13.74	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	LUZP1	Q86V48	1076 aa		13.74	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	SPC24	Q8NBT2	197 aa		13.74	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	SMARCC2	Q8TAQ2	1214 aa		13.74	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	CACTIN	Q8WUQ7	758 aa	Known RBP	13.74	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	PRDM10	Q9NQV6	1147 aa		13.74	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	DBF4	Q9UBU7	674 aa	Predicted RBP	13.74	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	POTEB2	H3BUK9	544 aa		13.73	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	TULP2	O00295	520 aa		13.73	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	SLC27A2	O14975	620 aa		13.73	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	ZSCAN12	O43309	604 aa		13.73	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	PSME1	Q06323	249 aa		13.73	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	REST	Q13127	1097 aa		13.73	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	OS9	Q13438	667 aa	Predicted RBP	13.73	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	CT47A1	Q5JQC4	288 aa	Predicted RBP	13.73	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	PRPF40B	Q6NWY9	871 aa	Known RBP	13.73	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	MPHOSPH8	Q99549	860 aa		13.73	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	MET	P08581	1390 aa		13.72	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	EFCAB8	A8MWE9	144 aa		13.72	□□□□□ -0.21
U2AF1L4-221	ENST00000601236		H3BQV1	296 aa		13.72	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	RAPGEF3	O95398	923 aa		13.72	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	LIG1	P18858	919 aa		13.72	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	IFFO2	Q5TF58	517 aa		13.72	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	KCNG4	Q8TDN1	519 aa		13.72	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	TPCN1	Q9ULQ1	816 aa		13.72	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	PHRF1	Q9P1Y6	1649 aa	Known RBP	13.72	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	TMEM2	Q9UHN6	1383 aa		13.71	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	MAP3K15	Q6ZN16	1313 aa		13.71	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	DHX16	O60231	1041 aa	Known RBP	13.71	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	PFKFB2	O60825	505 aa		13.71	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	YEATS4	O95619	227 aa		13.71	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	SFPQ	P23246	707 aa	Known RBP eCLIP	13.71	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	CYP2C19	P33261	490 aa		13.71	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	AMPH	P49418	695 aa		13.71	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	SNW1	Q13573	536 aa	Known RBP	13.71	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	AMOT	Q4VCS5	1084 aa		13.71	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	CCDC93	Q567U6	631 aa		13.71	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	HSP90AB2P	Q58FF8	381 aa		13.71	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	CCDC158	Q5M9N0	1113 aa		13.71	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	NOL8	Q76FK4	1167 aa	Known RBP	13.71	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	AGXT2	Q9BYV1	514 aa		13.71	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	KDM3B	Q7LBC6	1761 aa		13.71	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	PRR36	Q9H6K5	1346 aa		13.7	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	NUTM2F	A1L443	756 aa		13.7	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	CCDC69	A6NI79	296 aa		13.7	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	CCZ1B	P86790	482 aa		13.7	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	CCZ1	P86791	482 aa	Predicted RBP	13.7	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	G3BP1	Q13283	466 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	NUTM2G	Q5VZR2	741 aa		13.7	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	ADAL	Q6DHV7	355 aa		13.7	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	TMCO3	Q6UWJ1	677 aa		13.7	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	BRAP	Q7Z569	592 aa		13.7	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	NUTM1	Q86Y26	1132 aa		13.7	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	CCAR1	Q8IX12	1150 aa	Known RBP	13.7	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	LINS1	Q8NG48	757 aa		13.7	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	ZNF274	Q96GC6	653 aa	Predicted RBP	13.7	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	AK7	Q96M32	723 aa		13.7	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	EYA1	Q99502	592 aa		13.7	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	IL1RAPL2	Q9NP60	686 aa		13.7	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	DNAI1	Q9UI46	699 aa		13.7	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	13.7	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	WDR19	Q8NEZ3	1342 aa		13.69	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	SPDYE4	A6NLX3	237 aa		13.69	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	ETF1	P62495	437 aa	Known RBP	13.69	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	KMT5B	Q4FZB7	885 aa		13.69	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	KSR2	Q6VAB6	950 aa		13.69	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	CDC37L1	Q7L3B6	337 aa		13.69	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	GPR161	Q8N6U8	529 aa	Known RBP	13.69	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	ANKRD24	Q8TF21	1146 aa		13.69	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	CHAMP1	Q96JM3	812 aa		13.69	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	NEK1	Q96PY6	1258 aa		13.69	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	ZNF215	Q9UL58	517 aa	Predicted RBP	13.69	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	NPHP4	O75161	1426 aa	Predicted RBP	13.69	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	ATP5J	P18859	108 aa		13.68	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	EVC	P57679	992 aa		13.68	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	SF3B2	Q13435	895 aa	Known RBP	13.68	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	C17orf53	Q8N3J3	647 aa	Predicted RBP	13.68	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	JMY	Q8N9B5	988 aa		13.68	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	ENGASE	Q8NFI3	743 aa		13.68	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	UBXN4	Q92575	508 aa		13.68	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	DNAJC25	Q9H1X3	360 aa		13.68	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	EFCC1	Q9HA90	598 aa		13.68	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	RTEL1	Q9NZ71	1219 aa		13.68	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	SPG7	Q9UQ90	795 aa		13.68	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	TMEM94	Q12767	1356 aa		13.68	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	NWD1	Q149M9	1564 aa		13.67	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	DIP2B	Q9P265	1576 aa		13.67	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	LMO7	Q8WWI1	1683 aa		13.67	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	NR1I2	O75469	434 aa		13.67	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	IVL	P07476	585 aa		13.67	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	EIF4A1	P60842	406 aa	Known RBP	13.67	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	ST3GAL1	Q11201	340 aa		13.67	□□□□□ -0.22
U2AF1L4-221	ENST00000601236	IQUB	Q8NA54	791 aa		13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms