RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 SUPT20HQ8NEM7 779 aa23.45■■□□□ 1.34
CHMP2A-208ENST00000601220 TMX4Q9H1E5 349 aaPredicted RBP23.45■■□□□ 1.34
CHMP2A-208ENST00000601220 FMR1Q06787 632 aaKnown RBP eCLIP23.44■■□□□ 1.34
CHMP2A-208ENST00000601220 KIAA2012Q0VF49 1180 aa23.44■■□□□ 1.34
CHMP2A-208ENST00000601220 DPP8Q6V1X1 898 aaPredicted RBP23.44■■□□□ 1.34
CHMP2A-208ENST00000601220 USP50Q70EL3 339 aaPredicted RBP23.44■■□□□ 1.34
CHMP2A-208ENST00000601220 LAMB2P55268 1798 aa23.43■■□□□ 1.34
CHMP2A-208ENST00000601220 TRIM28Q13263 835 aaKnown RBP23.43■■□□□ 1.34
CHMP2A-208ENST00000601220 HYPKQ9NX55 129 aa23.43■■□□□ 1.34
CHMP2A-208ENST00000601220 GPRC5DQ9NZD1 345 aa23.43■■□□□ 1.34
CHMP2A-208ENST00000601220 ATP5J2-PTCD1G3V325 749 aa23.42■■□□□ 1.34
CHMP2A-208ENST00000601220 FOXN1O15353 648 aa23.42■■□□□ 1.34
CHMP2A-208ENST00000601220 SF3B3Q15393 1217 aaKnown RBP23.42■■□□□ 1.34
CHMP2A-208ENST00000601220 FAM89AQ96GI7 184 aa23.42■■□□□ 1.34
CHMP2A-208ENST00000601220 APAF1O14727 1248 aa23.41■■□□□ 1.34
CHMP2A-208ENST00000601220 DEFB115Q30KQ5 88 aa23.41■■□□□ 1.34
CHMP2A-208ENST00000601220 TMC4Q7Z404 712 aa23.4■■□□□ 1.34
CHMP2A-208ENST00000601220 CELF1Q92879 486 aaKnown RBP23.4■■□□□ 1.34
CHMP2A-208ENST00000601220 ADARB2Q9NS39 739 aaKnown RBP23.4■■□□□ 1.34
CHMP2A-208ENST00000601220 WBP1LQ9NX94 342 aa23.4■■□□□ 1.34
CHMP2A-208ENST00000601220 DUOX1Q9NRD9 1551 aa23.4■■□□□ 1.34
CHMP2A-208ENST00000601220 YDJCA8MPS7 323 aa23.39■■□□□ 1.33
CHMP2A-208ENST00000601220 GMPSP49915 693 aaPredicted RBP23.39■■□□□ 1.33
CHMP2A-208ENST00000601220 CST9Q5W186 159 aa23.39■■□□□ 1.33
CHMP2A-208ENST00000601220 IFT57Q9NWB7 429 aa23.39■■□□□ 1.33
CHMP2A-208ENST00000601220 CIAPIN1Q6FI81 312 aa23.38■■□□□ 1.33
CHMP2A-208ENST00000601220 PGAP2Q9UHJ9 254 aa23.38■■□□□ 1.33
CHMP2A-208ENST00000601220 TRAF5O00463 557 aa23.37■■□□□ 1.33
CHMP2A-208ENST00000601220 PHAXQ9H814 394 aaKnown RBP23.37■■□□□ 1.33
CHMP2A-208ENST00000601220 COL4A1P02462 1669 aa23.37■■□□□ 1.33
CHMP2A-208ENST00000601220 DDX60Q8IY21 1712 aaKnown RBP23.36■■□□□ 1.33
CHMP2A-208ENST00000601220 WDR33Q9C0J8 1336 aaKnown RBP23.36■■□□□ 1.33
CHMP2A-208ENST00000601220 RAD17O75943 681 aa23.36■■□□□ 1.33
CHMP2A-208ENST00000601220 HIRAP54198 1017 aaPredicted RBP23.36■■□□□ 1.33
CHMP2A-208ENST00000601220 ABT1Q9ULW3 272 aaKnown RBP23.36■■□□□ 1.33
CHMP2A-208ENST00000601220 CAPN15O75808 1086 aa23.35■■□□□ 1.33
CHMP2A-208ENST00000601220 GNAI1P63096 354 aa23.35■■□□□ 1.33
CHMP2A-208ENST00000601220 RTL5Q5HYW3 569 aaPredicted RBP23.35■■□□□ 1.33
CHMP2A-208ENST00000601220 C8orf58Q8NAV2 365 aa23.35■■□□□ 1.33
CHMP2A-208ENST00000601220 PRDM10Q9NQV6 1147 aa23.35■■□□□ 1.33
CHMP2A-208ENST00000601220 CDHR2Q9BYE9 1310 aa23.34■■□□□ 1.33
CHMP2A-208ENST00000601220 TAF1P21675 1872 aa23.34■■□□□ 1.33
CHMP2A-208ENST00000601220 LRRC37AA6NMS7 1700 aa23.34■■□□□ 1.33
CHMP2A-208ENST00000601220 ELL2O00472 640 aaPredicted RBP23.34■■□□□ 1.33
CHMP2A-208ENST00000601220 IRS4O14654 1257 aaPredicted RBP23.34■■□□□ 1.33
CHMP2A-208ENST00000601220 TNIP1Q15025 636 aa23.34■■□□□ 1.33
CHMP2A-208ENST00000601220 POLLQ9UGP5 575 aa23.34■■□□□ 1.33
CHMP2A-208ENST00000601220 SHTN1A0MZ66 631 aa23.33■■□□□ 1.33
CHMP2A-208ENST00000601220 CTCFP49711 727 aaPredicted RBP23.33■■□□□ 1.33
CHMP2A-208ENST00000601220 GPSM2P81274 684 aa23.33■■□□□ 1.33
CHMP2A-208ENST00000601220 RIC3Q7Z5B4 369 aa23.33■■□□□ 1.33
CHMP2A-208ENST00000601220 ZBTB38Q8NAP3 1195 aaPredicted RBP23.33■■□□□ 1.33
CHMP2A-208ENST00000601220 NSFL1CQ9UNZ2 370 aaKnown RBP23.33■■□□□ 1.33
CHMP2A-208ENST00000601220 CALD1Q05682 793 aaKnown RBP23.32■■□□□ 1.32
CHMP2A-208ENST00000601220 WASHC4Q2M389 1173 aa23.32■■□□□ 1.32
CHMP2A-208ENST00000601220 TRPM4Q8TD43 1214 aa23.32■■□□□ 1.32
CHMP2A-208ENST00000601220 RPS8P62241 208 aaKnown RBP23.31■■□□□ 1.32
CHMP2A-208ENST00000601220 ZC3H15Q8WU90 426 aaKnown RBP23.31■■□□□ 1.32
CHMP2A-208ENST00000601220 AIDAQ96BJ3 306 aa23.31■■□□□ 1.32
CHMP2A-208ENST00000601220 BCL2L13Q9BXK5 485 aa23.31■■□□□ 1.32
CHMP2A-208ENST00000601220 CNOT7Q9UIV1 285 aaKnown RBP23.31■■□□□ 1.32
CHMP2A-208ENST00000601220 TLL2Q9Y6L7 1015 aa23.31■■□□□ 1.32
CHMP2A-208ENST00000601220 GOLGA2Q08379 1002 aa23.3■■□□□ 1.32
CHMP2A-208ENST00000601220 GLIS2Q9BZE0 524 aaPredicted RBP23.3■■□□□ 1.32
CHMP2A-208ENST00000601220 SEC31BQ9NQW1 1179 aa23.3■■□□□ 1.32
CHMP2A-208ENST00000601220 CCDC184Q52MB2 194 aa23.29■■□□□ 1.32
CHMP2A-208ENST00000601220 TSPYL6Q8N831 410 aa23.29■■□□□ 1.32
CHMP2A-208ENST00000601220 CAPNS2Q96L46 248 aa23.29■■□□□ 1.32
CHMP2A-208ENST00000601220 MYD88Q99836 296 aa23.29■■□□□ 1.32
CHMP2A-208ENST00000601220 DBNDD1Q9H9R9 158 aa23.29■■□□□ 1.32
CHMP2A-208ENST00000601220 KCNQ5Q9NR82 932 aa23.29■■□□□ 1.32
CHMP2A-208ENST00000601220 ZBTB12Q9Y330 459 aaPredicted RBP23.29■■□□□ 1.32
CHMP2A-208ENST00000601220 PSMD14O00487 310 aa23.28■■□□□ 1.32
CHMP2A-208ENST00000601220 RIMBP2O15034 1052 aa23.28■■□□□ 1.32
CHMP2A-208ENST00000601220 PCCAP05165 728 aaPredicted RBP23.28■■□□□ 1.32
CHMP2A-208ENST00000601220 LBX1P52954 281 aa23.28■■□□□ 1.32
CHMP2A-208ENST00000601220 MAP2K1Q02750 393 aaPredicted RBP23.28■■□□□ 1.32
CHMP2A-208ENST00000601220 CYP4F22Q6NT55 531 aa23.28■■□□□ 1.32
CHMP2A-208ENST00000601220 CCDC191Q8NCU4 936 aa23.28■■□□□ 1.32
CHMP2A-208ENST00000601220 TBC1D16Q8TBP0 767 aa23.28■■□□□ 1.32
CHMP2A-208ENST00000601220 DPF2Q92785 391 aa23.28■■□□□ 1.32
CHMP2A-208ENST00000601220 HSPA8P11142 646 aaKnown RBP23.27■■□□□ 1.32
CHMP2A-208ENST00000601220 SAPCD2Q86UD0 394 aa23.27■■□□□ 1.32
CHMP2A-208ENST00000601220 MICALL2Q8IY33 904 aa23.27■■□□□ 1.32
CHMP2A-208ENST00000601220 METTL22Q9BUU2 404 aaPredicted RBP23.27■■□□□ 1.32
CHMP2A-208ENST00000601220 PODXL2Q9NZ53 605 aa23.27■■□□□ 1.32
CHMP2A-208ENST00000601220 RTL9Q8NET4 1388 aa23.27■■□□□ 1.31
CHMP2A-208ENST00000601220 C6orf229H3BNL8 230 aa23.26■■□□□ 1.31
CHMP2A-208ENST00000601220 CELF2O95319 508 aaKnown RBP23.26■■□□□ 1.31
CHMP2A-208ENST00000601220 JARID2Q92833 1246 aaPredicted RBP23.26■■□□□ 1.31
CHMP2A-208ENST00000601220 GPR101Q96P66 508 aaPredicted RBP23.26■■□□□ 1.31
CHMP2A-208ENST00000601220 THSD7BQ9C0I4 1608 aa23.26■■□□□ 1.31
CHMP2A-208ENST00000601220 H7C1D1 291 aa23.25■■□□□ 1.31
CHMP2A-208ENST00000601220 ECE1P42892 770 aa23.25■■□□□ 1.31
CHMP2A-208ENST00000601220 DOK7Q18PE1 504 aa23.25■■□□□ 1.31
CHMP2A-208ENST00000601220 CCDC30Q5VVM6 783 aa23.25■■□□□ 1.31
CHMP2A-208ENST00000601220 ECE2O60344 883 aa23.24■■□□□ 1.31
CHMP2A-208ENST00000601220 PDE8AO60658 829 aa23.24■■□□□ 1.31
CHMP2A-208ENST00000601220 EGFRP00533 1210 aa23.24■■□□□ 1.31
CHMP2A-208ENST00000601220 CDC37L1Q7L3B6 337 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms