RNA–Protein interactions for RNA: ENST00000601065.5

SNRNP70-209, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 3

Gene SNRNP70, Length 1,757 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-209ENST00000601065 FAM161AQ3B820 660 aa27.4■■□□□ 1.98
SNRNP70-209ENST00000601065 CCDC85AQ96PX6 553 aaPredicted RBP27.4■■□□□ 1.98
SNRNP70-209ENST00000601065 CASZ1Q86V15 1759 aa27.39■■□□□ 1.98
SNRNP70-209ENST00000601065 PA2G4Q9UQ80 394 aaKnown RBP27.39■■□□□ 1.98
SNRNP70-209ENST00000601065 EXOC6BQ9Y2D4 811 aa27.39■■□□□ 1.98
SNRNP70-209ENST00000601065 R3HDM1Q15032 1099 aaKnown RBP27.38■■□□□ 1.97
SNRNP70-209ENST00000601065 GREM2Q9H772 168 aa27.38■■□□□ 1.97
SNRNP70-209ENST00000601065 PARP3Q9Y6F1 533 aa27.38■■□□□ 1.97
SNRNP70-209ENST00000601065 SURF6O75683 361 aaKnown RBP27.37■■□□□ 1.97
SNRNP70-209ENST00000601065 ST5P78524 1137 aa27.37■■□□□ 1.97
SNRNP70-209ENST00000601065 PTPN12Q05209 780 aaKnown RBP27.37■■□□□ 1.97
SNRNP70-209ENST00000601065 C3orf67Q6ZVT6 689 aa27.37■■□□□ 1.97
SNRNP70-209ENST00000601065 KLHDC4Q8TBB5 520 aa27.37■■□□□ 1.97
SNRNP70-209ENST00000601065 NOP58Q9Y2X3 529 aaKnown RBP27.37■■□□□ 1.97
SNRNP70-209ENST00000601065 RIC1Q4ADV7 1423 aa27.37■■□□□ 1.97
SNRNP70-209ENST00000601065 CCDC57Q2TAC2 916 aa27.37■■□□□ 1.97
SNRNP70-209ENST00000601065 PELP1Q8IZL8 1130 aaKnown RBP27.37■■□□□ 1.97
SNRNP70-209ENST00000601065 COPRSQ9NQ92 184 aa27.37■■□□□ 1.97
SNRNP70-209ENST00000601065 TNRC6CQ9HCJ0 1690 aaKnown RBP27.36■■□□□ 1.97
SNRNP70-209ENST00000601065 SF3B3Q15393 1217 aaKnown RBP27.36■■□□□ 1.97
SNRNP70-209ENST00000601065 CCDC152Q4G0S7 254 aa27.36■■□□□ 1.97
SNRNP70-209ENST00000601065 SKAP1Q86WV1 359 aa27.36■■□□□ 1.97
SNRNP70-209ENST00000601065 NLRP3Q96P20 1036 aa27.36■■□□□ 1.97
SNRNP70-209ENST00000601065 ITGA6P23229 1130 aa27.35■■□□□ 1.97
SNRNP70-209ENST00000601065 IFIT5Q13325 482 aaKnown RBP27.35■■□□□ 1.97
SNRNP70-209ENST00000601065 RTL9Q8NET4 1388 aa27.34■■□□□ 1.97
SNRNP70-209ENST00000601065 NUCB1Q02818 461 aa27.33■■□□□ 1.97
SNRNP70-209ENST00000601065 HSP90AB4PQ58FF6 505 aa27.33■■□□□ 1.97
SNRNP70-209ENST00000601065 PDZRN3Q9UPQ7 1066 aa27.33■■□□□ 1.97
SNRNP70-209ENST00000601065 ANKRD18BA2A2Z9 1011 aa27.32■■□□□ 1.96
SNRNP70-209ENST00000601065 ANKRD45Q5TZF3 282 aa27.32■■□□□ 1.96
SNRNP70-209ENST00000601065 ZNF594Q96JF6 807 aaPredicted RBP27.32■■□□□ 1.96
SNRNP70-209ENST00000601065 SIL1Q9H173 461 aa27.32■■□□□ 1.96
SNRNP70-209ENST00000601065 APBB1O00213 710 aa27.32■■□□□ 1.96
SNRNP70-209ENST00000601065 RAB11FIP3O75154 756 aa27.31■■□□□ 1.96
SNRNP70-209ENST00000601065 SEC31BQ9NQW1 1179 aa27.3■■□□□ 1.96
SNRNP70-209ENST00000601065 ANKRD31Q8N7Z5 1873 aa27.3■■□□□ 1.96
SNRNP70-209ENST00000601065 PSDA5PKW4 1024 aaPredicted RBP27.3■■□□□ 1.96
SNRNP70-209ENST00000601065 ZBTB7AO95365 584 aa27.3■■□□□ 1.96
SNRNP70-209ENST00000601065 G3BP1Q13283 466 aaKnown RBP eCLIP27.3■■□□□ 1.961e-7■□□□□ 8.5
SNRNP70-209ENST00000601065 CHD1LQ86WJ1 897 aa27.3■■□□□ 1.96
SNRNP70-209ENST00000601065 OS9Q13438 667 aaPredicted RBP27.29■■□□□ 1.96
SNRNP70-209ENST00000601065 TAF7LQ5H9L4 462 aa27.29■■□□□ 1.96
SNRNP70-209ENST00000601065 LRRCC1Q9C099 1032 aa27.29■■□□□ 1.96
SNRNP70-209ENST00000601065 MTFR1LQ9H019 292 aa27.29■■□□□ 1.96
SNRNP70-209ENST00000601065 BRIP1Q9BX63 1249 aa27.28■■□□□ 1.96
SNRNP70-209ENST00000601065 CRY2Q49AN0 593 aa27.27■■□□□ 1.96
SNRNP70-209ENST00000601065 ERC1Q8IUD2 1116 aa27.27■■□□□ 1.96
SNRNP70-209ENST00000601065 RHPN1Q8TCX5 695 aa27.27■■□□□ 1.96
SNRNP70-209ENST00000601065 KIF1BPQ96EK5 621 aa27.27■■□□□ 1.96
SNRNP70-209ENST00000601065 LNPKQ9C0E8 428 aa27.27■■□□□ 1.96
SNRNP70-209ENST00000601065 FBXO3Q9UK99 471 aa27.27■■□□□ 1.96
SNRNP70-209ENST00000601065 KLRG2A4D1S0 409 aaPredicted RBP27.27■■□□□ 1.96
SNRNP70-209ENST00000601065 EYA2O00167 538 aa27.27■■□□□ 1.96
SNRNP70-209ENST00000601065 LRP5O75197 1615 aa27.27■■□□□ 1.96
SNRNP70-209ENST00000601065 SMARCA5O60264 1052 aaPredicted RBP27.26■■□□□ 1.95
SNRNP70-209ENST00000601065 CIAO1O76071 339 aa27.26■■□□□ 1.95
SNRNP70-209ENST00000601065 SASH1O94885 1247 aa27.26■■□□□ 1.95
SNRNP70-209ENST00000601065 LRRC24Q50LG9 513 aa27.26■■□□□ 1.95
SNRNP70-209ENST00000601065 ATG9AQ7Z3C6 839 aa27.26■■□□□ 1.95
SNRNP70-209ENST00000601065 PUS3Q9BZE2 481 aaKnown RBP27.26■■□□□ 1.95
SNRNP70-209ENST00000601065 COL4A1P02462 1669 aa27.26■■□□□ 1.95
SNRNP70-209ENST00000601065 RGS3P49796 1198 aa27.25■■□□□ 1.95
SNRNP70-209ENST00000601065 CDC5LQ99459 802 aaKnown RBP27.25■■□□□ 1.95
SNRNP70-209ENST00000601065 TAF1P21675 1872 aa27.25■■□□□ 1.95
SNRNP70-209ENST00000601065 LDHAL6AQ6ZMR3 332 aa27.25■■□□□ 1.95
SNRNP70-209ENST00000601065 ZBTB47Q9UFB7 747 aaPredicted RBP27.25■■□□□ 1.95
SNRNP70-209ENST00000601065 IL15P40933 162 aaPredicted RBP27.24■■□□□ 1.95
SNRNP70-209ENST00000601065 ATF5Q9Y2D1 282 aaPredicted RBP27.24■■□□□ 1.95
SNRNP70-209ENST00000601065 DDX46Q7L014 1031 aaKnown RBP27.23■■□□□ 1.95
SNRNP70-209ENST00000601065 SPEF2Q9C093 1822 aa27.22■■□□□ 1.95
SNRNP70-209ENST00000601065 IL1RAPL2Q9NP60 686 aa27.22■■□□□ 1.95
SNRNP70-209ENST00000601065 PDE4AP27815 886 aa27.22■■□□□ 1.95
SNRNP70-209ENST00000601065 PDE6BP35913 854 aa27.22■■□□□ 1.95
SNRNP70-209ENST00000601065 IGHMBP2P38935 993 aaKnown RBP27.22■■□□□ 1.95
SNRNP70-209ENST00000601065 RPGRQ92834 1020 aaKnown RBP27.22■■□□□ 1.95
SNRNP70-209ENST00000601065 CELF1Q92879 486 aaKnown RBP27.22■■□□□ 1.95
SNRNP70-209ENST00000601065 MPHOSPH8Q99549 860 aa27.22■■□□□ 1.95
SNRNP70-209ENST00000601065 RIPOR2Q9Y4F9 1068 aa27.22■■□□□ 1.95
SNRNP70-209ENST00000601065 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.22■■□□□ 1.95
SNRNP70-209ENST00000601065 ANKRD18AQ8IVF6 992 aa27.21■■□□□ 1.95
SNRNP70-209ENST00000601065 CNNM1Q9NRU3 951 aa27.21■■□□□ 1.95
SNRNP70-209ENST00000601065 BCL11AQ9H165 835 aa27.2■■□□□ 1.95
SNRNP70-209ENST00000601065 POLD1P28340 1107 aa27.2■■□□□ 1.94
SNRNP70-209ENST00000601065 TFCP2Q12800 502 aa27.2■■□□□ 1.94
SNRNP70-209ENST00000601065 C10orf71Q711Q0 1435 aa27.19■■□□□ 1.94
SNRNP70-209ENST00000601065 COL11A2P13942 1736 aaPredicted RBP27.19■■□□□ 1.94
SNRNP70-209ENST00000601065 HOXA10P31260 410 aaPredicted RBP27.19■■□□□ 1.94
SNRNP70-209ENST00000601065 SRGNP10124 158 aa27.18■■□□□ 1.94
SNRNP70-209ENST00000601065 RPS8P62241 208 aaKnown RBP27.18■■□□□ 1.94
SNRNP70-209ENST00000601065 GRAPQ13588 217 aa27.18■■□□□ 1.94
SNRNP70-209ENST00000601065 C16orf71Q8IYS4 520 aaPredicted RBP27.18■■□□□ 1.94
SNRNP70-209ENST00000601065 GRAPLQ8TC17 118 aaPredicted RBP27.18■■□□□ 1.94
SNRNP70-209ENST00000601065 RBM17Q96I25 401 aaKnown RBP27.18■■□□□ 1.94
SNRNP70-209ENST00000601065 BSDC1Q9NW68 430 aaPredicted RBP27.18■■□□□ 1.94
SNRNP70-209ENST00000601065 CLASRPQ8N2M8 674 aaKnown RBP27.17■■□□□ 1.94
SNRNP70-209ENST00000601065 SGIP1Q9BQI5 828 aa27.17■■□□□ 1.94
SNRNP70-209ENST00000601065 MROH5Q6ZUA9 1318 aa27.16■■□□□ 1.94
SNRNP70-209ENST00000601065 NPR1P16066 1061 aa27.15■■□□□ 1.94
SNRNP70-209ENST00000601065 METTL24Q5JXM2 366 aa27.15■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms