RNA–Protein interactions for RNA: ENST00000598808.5

IRF3-221, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-221ENST00000598808 SUPT16HQ9Y5B9 1047 aaKnown RBP25.34■■□□□ 1.65
IRF3-221ENST00000598808 ABCC4O15439 1325 aa25.33■■□□□ 1.65
IRF3-221ENST00000598808 C21orf2O43822 256 aa25.33■■□□□ 1.65
IRF3-221ENST00000598808 CTSWP56202 376 aa25.33■■□□□ 1.65
IRF3-221ENST00000598808 CCDC152Q4G0S7 254 aa25.33■■□□□ 1.65
IRF3-221ENST00000598808 CHMP3Q9Y3E7 222 aa25.33■■□□□ 1.65
IRF3-221ENST00000598808 ARHGAP27Q6ZUM4 889 aa25.32■■□□□ 1.64
IRF3-221ENST00000598808 SLX4Q8IY92 1834 aa25.32■■□□□ 1.64
IRF3-221ENST00000598808 ARFGEF1Q9Y6D6 1849 aa25.32■■□□□ 1.64
IRF3-221ENST00000598808 MYH3P11055 1940 aa25.31■■□□□ 1.64
IRF3-221ENST00000598808 PPEF1O14829 653 aaPredicted RBP25.3■■□□□ 1.64
IRF3-221ENST00000598808 HOXA10P31260 410 aaPredicted RBP25.3■■□□□ 1.64
IRF3-221ENST00000598808 SF3B3Q15393 1217 aaKnown RBP25.3■■□□□ 1.64
IRF3-221ENST00000598808 CRAMP1Q96RY5 1269 aa25.3■■□□□ 1.64
IRF3-221ENST00000598808 NBPF7P0C2Y1 421 aaPredicted RBP25.29■■□□□ 1.64
IRF3-221ENST00000598808 CASP7P55210 303 aa25.29■■□□□ 1.64
IRF3-221ENST00000598808 DZIP1LQ8IYY4 767 aaKnown RBP25.29■■□□□ 1.64
IRF3-221ENST00000598808 TMX4Q9H1E5 349 aaPredicted RBP25.29■■□□□ 1.64
IRF3-221ENST00000598808 PLIN1O60240 522 aa25.28■■□□□ 1.64
IRF3-221ENST00000598808 GRAPQ13588 217 aa25.28■■□□□ 1.64
IRF3-221ENST00000598808 GRAPLQ8TC17 118 aaPredicted RBP25.28■■□□□ 1.64
IRF3-221ENST00000598808 TMEM57Q8N5G2 664 aa25.28■■□□□ 1.64
IRF3-221ENST00000598808 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.28■■□□□ 1.64
IRF3-221ENST00000598808 TAF1P21675 1872 aa25.27■■□□□ 1.64
IRF3-221ENST00000598808 ITPRIPQ8IWB1 547 aa25.27■■□□□ 1.64
IRF3-221ENST00000598808 SUCLG2Q96I99 432 aa25.27■■□□□ 1.64
IRF3-221ENST00000598808 SEC31BQ9NQW1 1179 aa25.27■■□□□ 1.64
IRF3-221ENST00000598808 UBTFL1P0CB47 393 aaPredicted RBP25.26■■□□□ 1.63
IRF3-221ENST00000598808 SOGA3Q5TF21 947 aa25.26■■□□□ 1.63
IRF3-221ENST00000598808 INTS3Q68E01 1043 aaKnown RBP25.26■■□□□ 1.63
IRF3-221ENST00000598808 OLFM4Q6UX06 510 aa25.26■■□□□ 1.63
IRF3-221ENST00000598808 TTLL11Q8NHH1 800 aa25.26■■□□□ 1.63
IRF3-221ENST00000598808 PLA2G12BQ9BX93 195 aa25.26■■□□□ 1.63
IRF3-221ENST00000598808 USP44Q9H0E7 712 aa25.26■■□□□ 1.63
IRF3-221ENST00000598808 GREM2Q9H772 168 aa25.26■■□□□ 1.63
IRF3-221ENST00000598808 FAM161AQ3B820 660 aa25.25■■□□□ 1.63
IRF3-221ENST00000598808 CCDC93Q567U6 631 aa25.25■■□□□ 1.63
IRF3-221ENST00000598808 PANK1Q8TE04 598 aa25.25■■□□□ 1.63
IRF3-221ENST00000598808 CELF1Q92879 486 aaKnown RBP25.25■■□□□ 1.63
IRF3-221ENST00000598808 MS4A1P11836 297 aa25.24■■□□□ 1.63
IRF3-221ENST00000598808 RASSF7Q02833 373 aa25.23■■□□□ 1.63
IRF3-221ENST00000598808 EPHA10Q5JZY3 1008 aa25.23■■□□□ 1.63
IRF3-221ENST00000598808 LMBR1LQ6UX01 489 aa25.23■■□□□ 1.63
IRF3-221ENST00000598808 CDC5LQ99459 802 aaKnown RBP25.23■■□□□ 1.63
IRF3-221ENST00000598808 MEIS3Q99687 375 aa25.23■■□□□ 1.63
IRF3-221ENST00000598808 UTYO14607 1347 aa25.23■■□□□ 1.63
IRF3-221ENST00000598808 BBOX1O75936 387 aa25.22■■□□□ 1.63
IRF3-221ENST00000598808 RLBP1P12271 317 aa25.22■■□□□ 1.63
IRF3-221ENST00000598808 FOXO4P98177 505 aa25.22■■□□□ 1.63
IRF3-221ENST00000598808 SLC51AQ86UW1 340 aa25.22■■□□□ 1.63
IRF3-221ENST00000598808 ANKRD18AQ8IVF6 992 aa25.22■■□□□ 1.63
IRF3-221ENST00000598808 ZNF784Q8NCA9 323 aaPredicted RBP25.22■■□□□ 1.63
IRF3-221ENST00000598808 BICC1Q9H694 974 aaKnown RBP25.22■■□□□ 1.63
IRF3-221ENST00000598808 SPEF2Q9C093 1822 aa25.22■■□□□ 1.63
IRF3-221ENST00000598808 ITGA6P23229 1130 aa25.21■■□□□ 1.63
IRF3-221ENST00000598808 TAF7LQ5H9L4 462 aa25.21■■□□□ 1.63
IRF3-221ENST00000598808 COL4A1P02462 1669 aa25.21■■□□□ 1.63
IRF3-221ENST00000598808 ANKRD18BA2A2Z9 1011 aa25.21■■□□□ 1.63
IRF3-221ENST00000598808 RPS8P62241 208 aaKnown RBP25.21■■□□□ 1.63
IRF3-221ENST00000598808 GNAI3P08754 354 aa25.2■■□□□ 1.62
IRF3-221ENST00000598808 IFIT5Q13325 482 aaKnown RBP25.2■■□□□ 1.62
IRF3-221ENST00000598808 TAOK3Q9H2K8 898 aa25.2■■□□□ 1.62
IRF3-221ENST00000598808 HDAC5Q9UQL6 1122 aa25.2■■□□□ 1.62
IRF3-221ENST00000598808 ATP6V0A2Q9Y487 856 aa25.2■■□□□ 1.62
IRF3-221ENST00000598808 IGHMBP2P38935 993 aaKnown RBP25.19■■□□□ 1.62
IRF3-221ENST00000598808 CCDC57Q2TAC2 916 aa25.19■■□□□ 1.62
IRF3-221ENST00000598808 C7orf43Q8WVR3 580 aa25.19■■□□□ 1.62
IRF3-221ENST00000598808 LRRFIP2Q9Y608 721 aaKnown RBP25.19■■□□□ 1.62
IRF3-221ENST00000598808 RTL9Q8NET4 1388 aa25.18■■□□□ 1.62
IRF3-221ENST00000598808 CSF1RP07333 972 aa25.18■■□□□ 1.62
IRF3-221ENST00000598808 TMC4Q7Z404 712 aa25.18■■□□□ 1.62
IRF3-221ENST00000598808 RTKN2Q8IZC4 609 aa25.18■■□□□ 1.62
IRF3-221ENST00000598808 CC2D2BQ6DHV5 1058 aa25.17■■□□□ 1.62
IRF3-221ENST00000598808 KAZALD1Q96I82 304 aa25.17■■□□□ 1.62
IRF3-221ENST00000598808 MPHOSPH8Q99549 860 aa25.17■■□□□ 1.62
IRF3-221ENST00000598808 NFKBIEO00221 500 aa25.16■■□□□ 1.62
IRF3-221ENST00000598808 SP8Q8IXZ3 490 aa25.16■■□□□ 1.62
IRF3-221ENST00000598808 COG6Q9Y2V7 657 aa25.16■■□□□ 1.62
IRF3-221ENST00000598808 DPP8Q6V1X1 898 aaPredicted RBP25.15■■□□□ 1.62
IRF3-221ENST00000598808 ANKRD44Q8N8A2 993 aa25.15■■□□□ 1.62
IRF3-221ENST00000598808 FER1L6Q2WGJ9 1857 aa25.15■■□□□ 1.62
IRF3-221ENST00000598808 RRP1P56182 461 aaKnown RBP25.15■■□□□ 1.62
IRF3-221ENST00000598808 MPNDQ8N594 471 aa25.15■■□□□ 1.62
IRF3-221ENST00000598808 RNF181Q9P0P0 153 aa25.15■■□□□ 1.62
IRF3-221ENST00000598808 GNAI2P04899 355 aa25.14■■□□□ 1.61
IRF3-221ENST00000598808 FKBP4Q02790 459 aaKnown RBP eCLIP25.14■■□□□ 1.61
IRF3-221ENST00000598808 C20orf194Q5TEA3 1177 aa25.14■■□□□ 1.61
IRF3-221ENST00000598808 ZNF594Q96JF6 807 aaPredicted RBP25.14■■□□□ 1.61
IRF3-221ENST00000598808 ANKIB1Q9P2G1 1089 aa25.14■■□□□ 1.61
IRF3-221ENST00000598808 NSFL1CQ9UNZ2 370 aaKnown RBP25.14■■□□□ 1.61
IRF3-221ENST00000598808 C9orf131Q5VYM1 1079 aa25.13■■□□□ 1.61
IRF3-221ENST00000598808 C1orf115Q9H7X2 142 aa25.13■■□□□ 1.61
IRF3-221ENST00000598808 ZNF277Q9NRM2 450 aaPredicted RBP25.13■■□□□ 1.61
IRF3-221ENST00000598808 LRRC37AA6NMS7 1700 aa25.12■■□□□ 1.61
IRF3-221ENST00000598808 LMNB1P20700 586 aa25.12■■□□□ 1.61
IRF3-221ENST00000598808 MVPQ14764 893 aaKnown RBP25.12■■□□□ 1.61
IRF3-221ENST00000598808 RABL6Q3YEC7 729 aaPredicted RBP25.12■■□□□ 1.61
IRF3-221ENST00000598808 GRIPAP1Q4V328 841 aa25.11■■□□□ 1.61
IRF3-221ENST00000598808 CNNM1Q9NRU3 951 aa25.11■■□□□ 1.61
IRF3-221ENST00000598808 GPSM2P81274 684 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms