RNA–Protein interactions for RNA: ENST00000598607.1

GTF2F1-206, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 4

Gene GTF2F1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-206ENST00000598607 C3orf67Q6ZVT6 689 aa19.02■□□□□ 0.64
GTF2F1-206ENST00000598607 DDX46Q7L014 1031 aaKnown RBP19.02■□□□□ 0.64
GTF2F1-206ENST00000598607 CRAMP1Q96RY5 1269 aa19.02■□□□□ 0.64
GTF2F1-206ENST00000598607 HDAC5Q9UQL6 1122 aa19.02■□□□□ 0.64
GTF2F1-206ENST00000598607 FER1L6Q2WGJ9 1857 aa19.02■□□□□ 0.64
GTF2F1-206ENST00000598607 CCDC88AQ3V6T2 1871 aa19.02■□□□□ 0.64
GTF2F1-206ENST00000598607 CTSWP56202 376 aa19.01■□□□□ 0.63
GTF2F1-206ENST00000598607 WWC3Q9ULE0 1092 aa19.01■□□□□ 0.63
GTF2F1-206ENST00000598607 GRIN3BO60391 1043 aa19■□□□□ 0.63
GTF2F1-206ENST00000598607 PRPF40BQ6NWY9 871 aaKnown RBP19■□□□□ 0.63
GTF2F1-206ENST00000598607 USP44Q9H0E7 712 aa19■□□□□ 0.63
GTF2F1-206ENST00000598607 TNNQ9UQP3 1299 aa19■□□□□ 0.63
GTF2F1-206ENST00000598607 NBPF7P0C2Y1 421 aaPredicted RBP18.99■□□□□ 0.63
GTF2F1-206ENST00000598607 YBX3P16989 372 aaKnown RBP eCLIP18.99■□□□□ 0.633e-13■■■■□ 19.7
GTF2F1-206ENST00000598607 TMEM57Q8N5G2 664 aa18.99■□□□□ 0.63
GTF2F1-206ENST00000598607 SBF1O95248 1867 aa18.99■□□□□ 0.63
GTF2F1-206ENST00000598607 RTL9Q8NET4 1388 aa18.98■□□□□ 0.63
GTF2F1-206ENST00000598607 LRRC37AA6NMS7 1700 aa18.98■□□□□ 0.63
GTF2F1-206ENST00000598607 UBTFL1P0CB47 393 aaPredicted RBP18.98■□□□□ 0.63
GTF2F1-206ENST00000598607 GRAPQ13588 217 aa18.98■□□□□ 0.63
GTF2F1-206ENST00000598607 SOGA3Q5TF21 947 aa18.98■□□□□ 0.63
GTF2F1-206ENST00000598607 TTLL11Q8NHH1 800 aa18.98■□□□□ 0.63
GTF2F1-206ENST00000598607 GRAPLQ8TC17 118 aaPredicted RBP18.98■□□□□ 0.63
GTF2F1-206ENST00000598607 GNAI3P08754 354 aa18.97■□□□□ 0.63
GTF2F1-206ENST00000598607 TMC4Q7Z404 712 aa18.97■□□□□ 0.63
GTF2F1-206ENST00000598607 SUCLG2Q96I99 432 aa18.97■□□□□ 0.63
GTF2F1-206ENST00000598607 PPEF1O14829 653 aaPredicted RBP18.96■□□□□ 0.63
GTF2F1-206ENST00000598607 BBOX1O75936 387 aa18.96■□□□□ 0.63
GTF2F1-206ENST00000598607 CSF1RP07333 972 aa18.96■□□□□ 0.63
GTF2F1-206ENST00000598607 FOXO4P98177 505 aa18.96■□□□□ 0.63
GTF2F1-206ENST00000598607 ITPRIPQ8IWB1 547 aa18.96■□□□□ 0.63
GTF2F1-206ENST00000598607 CDC5LQ99459 802 aaKnown RBP18.96■□□□□ 0.63
GTF2F1-206ENST00000598607 TMX4Q9H1E5 349 aaPredicted RBP18.96■□□□□ 0.63
GTF2F1-206ENST00000598607 DICER1Q9UPY3 1922 aaKnown RBP18.96■□□□□ 0.63
GTF2F1-206ENST00000598607 PLIN1O60240 522 aa18.95■□□□□ 0.62
GTF2F1-206ENST00000598607 RLBP1P12271 317 aa18.95■□□□□ 0.62
GTF2F1-206ENST00000598607 PDE3AQ14432 1141 aa18.95■□□□□ 0.62
GTF2F1-206ENST00000598607 CC2D2BQ6DHV5 1058 aa18.95■□□□□ 0.62
GTF2F1-206ENST00000598607 CCDC85AQ96PX6 553 aaPredicted RBP18.95■□□□□ 0.62
GTF2F1-206ENST00000598607 C21orf2O43822 256 aa18.94■□□□□ 0.62
GTF2F1-206ENST00000598607 GRIPAP1Q4V328 841 aa18.94■□□□□ 0.62
GTF2F1-206ENST00000598607 LMBR1LQ6UX01 489 aa18.94■□□□□ 0.62
GTF2F1-206ENST00000598607 PANK1Q8TE04 598 aa18.94■□□□□ 0.62
GTF2F1-206ENST00000598607 MEIS3Q99687 375 aa18.94■□□□□ 0.62
GTF2F1-206ENST00000598607 GREM2Q9H772 168 aa18.94■□□□□ 0.62
GTF2F1-206ENST00000598607 CHMP3Q9Y3E7 222 aa18.94■□□□□ 0.62
GTF2F1-206ENST00000598607 ANKRD18BA2A2Z9 1011 aa18.93■□□□□ 0.62
GTF2F1-206ENST00000598607 RRP1P56182 461 aaKnown RBP18.93■□□□□ 0.62
GTF2F1-206ENST00000598607 RPS8P62241 208 aaKnown RBP18.93■□□□□ 0.62
GTF2F1-206ENST00000598607 CCDC93Q567U6 631 aa18.93■□□□□ 0.62
GTF2F1-206ENST00000598607 EPHA10Q5JZY3 1008 aa18.93■□□□□ 0.62
GTF2F1-206ENST00000598607 ANKRD18AQ8IVF6 992 aa18.93■□□□□ 0.62
GTF2F1-206ENST00000598607 CELF1Q92879 486 aaKnown RBP18.93■□□□□ 0.62
GTF2F1-206ENST00000598607 KAZALD1Q96I82 304 aa18.93■□□□□ 0.62
GTF2F1-206ENST00000598607 CHMP4BQ9H444 224 aaKnown RBP18.93■□□□□ 0.62
GTF2F1-206ENST00000598607 BICC1Q9H694 974 aaKnown RBP18.93■□□□□ 0.62
GTF2F1-206ENST00000598607 SEC31BQ9NQW1 1179 aa18.93■□□□□ 0.62
GTF2F1-206ENST00000598607 ZNF219Q9P2Y4 722 aaPredicted RBP18.93■□□□□ 0.62
GTF2F1-206ENST00000598607 A0A1B0GUL6 1792 aa18.93■□□□□ 0.62
GTF2F1-206ENST00000598607 COL4A1P02462 1669 aa18.92■□□□□ 0.62
GTF2F1-206ENST00000598607 ITGA6P23229 1130 aa18.92■□□□□ 0.62
GTF2F1-206ENST00000598607 IFIT5Q13325 482 aaKnown RBP18.92■□□□□ 0.62
GTF2F1-206ENST00000598607 MVPQ14764 893 aaKnown RBP18.92■□□□□ 0.62
GTF2F1-206ENST00000598607 FAM161AQ3B820 660 aa18.92■□□□□ 0.62
GTF2F1-206ENST00000598607 RABL6Q3YEC7 729 aaPredicted RBP18.92■□□□□ 0.62
GTF2F1-206ENST00000598607 ARHGAP27Q6ZUM4 889 aa18.92■□□□□ 0.62
GTF2F1-206ENST00000598607 SP8Q8IXZ3 490 aa18.92■□□□□ 0.62
GTF2F1-206ENST00000598607 C7orf43Q8WVR3 580 aa18.92■□□□□ 0.62
GTF2F1-206ENST00000598607 DDX19BQ9UMR2 479 aa18.92■□□□□ 0.62
GTF2F1-206ENST00000598607 ATP6V0A2Q9Y487 856 aa18.92■□□□□ 0.62
GTF2F1-206ENST00000598607 IGHMBP2P38935 993 aaKnown RBP18.91■□□□□ 0.62
GTF2F1-206ENST00000598607 CCDC57Q2TAC2 916 aa18.91■□□□□ 0.62
GTF2F1-206ENST00000598607 RTKN2Q8IZC4 609 aa18.91■□□□□ 0.62
GTF2F1-206ENST00000598607 GNAI2P04899 355 aa18.9■□□□□ 0.62
GTF2F1-206ENST00000598607 LRRFIP2Q9Y608 721 aaKnown RBP18.9■□□□□ 0.62
GTF2F1-206ENST00000598607 ZBTB7BO15156 539 aaPredicted RBP18.89■□□□□ 0.61
GTF2F1-206ENST00000598607 TAF7LQ5H9L4 462 aa18.89■□□□□ 0.61
GTF2F1-206ENST00000598607 ANKRD44Q8N8A2 993 aa18.89■□□□□ 0.61
GTF2F1-206ENST00000598607 MPHOSPH8Q99549 860 aa18.89■□□□□ 0.61
GTF2F1-206ENST00000598607 COG6Q9Y2V7 657 aa18.89■□□□□ 0.61
GTF2F1-206ENST00000598607 LTBP1Q14766 1721 aa18.88■□□□□ 0.61
GTF2F1-206ENST00000598607 BSDC1Q9NW68 430 aaPredicted RBP18.88■□□□□ 0.61
GTF2F1-206ENST00000598607 LTBP3Q9NS15 1303 aa18.88■□□□□ 0.61
GTF2F1-206ENST00000598607 GOLGB1Q14789 3259 aaKnown RBP18.87■□□□□ 0.61
GTF2F1-206ENST00000598607 TIAM2Q8IVF5 1701 aa18.87■□□□□ 0.61
GTF2F1-206ENST00000598607 SNED1Q8TER0 1413 aa18.87■□□□□ 0.61
GTF2F1-206ENST00000598607 TAOK3Q9H2K8 898 aa18.87■□□□□ 0.61
GTF2F1-206ENST00000598607 FKBP4Q02790 459 aaKnown RBP eCLIP18.86■□□□□ 0.61
GTF2F1-206ENST00000598607 C20orf194Q5TEA3 1177 aa18.86■□□□□ 0.61
GTF2F1-206ENST00000598607 OLFM4Q6UX06 510 aa18.86■□□□□ 0.61
GTF2F1-206ENST00000598607 MPNDQ8N594 471 aa18.86■□□□□ 0.61
GTF2F1-206ENST00000598607 PSMD1Q99460 953 aa18.86■□□□□ 0.61
GTF2F1-206ENST00000598607 NFKBIEO00221 500 aa18.85■□□□□ 0.61
GTF2F1-206ENST00000598607 MTX1Q13505 466 aa18.85■□□□□ 0.61
GTF2F1-206ENST00000598607 DPP8Q6V1X1 898 aaPredicted RBP18.85■□□□□ 0.61
GTF2F1-206ENST00000598607 SUPT20HQ8NEM7 779 aa18.85■□□□□ 0.61
GTF2F1-206ENST00000598607 RASSF7Q02833 373 aa18.84■□□□□ 0.61
GTF2F1-206ENST00000598607 LMNB1P20700 586 aa18.83■□□□□ 0.6
GTF2F1-206ENST00000598607 LDHAL6AQ6ZMR3 332 aa18.83■□□□□ 0.6
GTF2F1-206ENST00000598607 ZNF594Q96JF6 807 aaPredicted RBP18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms