RNA–Protein interactions for RNA: ENST00000598441.5

SNRNP70-206, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP70, Length 1,574 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-206ENST00000598441 TMX4Q9H1E5 349 aaPredicted RBP29.45■■■□□ 2.31
SNRNP70-206ENST00000598441 CCDC152Q4G0S7 254 aa29.44■■■□□ 2.3
SNRNP70-206ENST00000598441 PPEF1O14829 653 aaPredicted RBP29.43■■■□□ 2.3
SNRNP70-206ENST00000598441 YY1P25490 414 aa29.43■■■□□ 2.3
SNRNP70-206ENST00000598441 CCDC85AQ96PX6 553 aaPredicted RBP29.43■■■□□ 2.3
SNRNP70-206ENST00000598441 GRM8O00222 908 aa29.43■■■□□ 2.3
SNRNP70-206ENST00000598441 CCDC93Q567U6 631 aa29.43■■■□□ 2.3
SNRNP70-206ENST00000598441 GRAPQ13588 217 aa29.42■■■□□ 2.3
SNRNP70-206ENST00000598441 GRAPLQ8TC17 118 aaPredicted RBP29.42■■■□□ 2.3
SNRNP70-206ENST00000598441 C7orf43Q8WVR3 580 aa29.42■■■□□ 2.3
SNRNP70-206ENST00000598441 ARHGAP45Q92619 1136 aa29.42■■■□□ 2.3
SNRNP70-206ENST00000598441 BBOX1O75936 387 aa29.41■■■□□ 2.3
SNRNP70-206ENST00000598441 CTSWP56202 376 aa29.41■■■□□ 2.3
SNRNP70-206ENST00000598441 RASSF7Q02833 373 aa29.4■■■□□ 2.3
SNRNP70-206ENST00000598441 OLFM4Q6UX06 510 aa29.4■■■□□ 2.3
SNRNP70-206ENST00000598441 CCT4P50991 539 aaKnown RBP29.39■■■□□ 2.3
SNRNP70-206ENST00000598441 CASP7P55210 303 aa29.39■■■□□ 2.3
SNRNP70-206ENST00000598441 RTKN2Q8IZC4 609 aa29.39■■■□□ 2.29
SNRNP70-206ENST00000598441 MYH3P11055 1940 aa29.38■■■□□ 2.29
SNRNP70-206ENST00000598441 CC2D2BQ6DHV5 1058 aa29.38■■■□□ 2.29
SNRNP70-206ENST00000598441 TAOK3Q9H2K8 898 aa29.38■■■□□ 2.29
SNRNP70-206ENST00000598441 TAF1P21675 1872 aa29.37■■■□□ 2.29
SNRNP70-206ENST00000598441 NFKBIEO00221 500 aa29.37■■■□□ 2.29
SNRNP70-206ENST00000598441 ATF7IPQ6VMQ6 1270 aa29.37■■■□□ 2.29
SNRNP70-206ENST00000598441 TTLL11Q8NHH1 800 aa29.37■■■□□ 2.29
SNRNP70-206ENST00000598441 PLA2G12BQ9BX93 195 aa29.37■■■□□ 2.29
SNRNP70-206ENST00000598441 ZKSCAN2Q63HK3 967 aa29.36■■■□□ 2.29
SNRNP70-206ENST00000598441 CELF1Q92879 486 aaKnown RBP29.36■■■□□ 2.29
SNRNP70-206ENST00000598441 SEC31BQ9NQW1 1179 aa29.36■■■□□ 2.29
SNRNP70-206ENST00000598441 ATP6V0A2Q9Y487 856 aa29.36■■■□□ 2.29
SNRNP70-206ENST00000598441 TRIM27P14373 513 aa29.35■■■□□ 2.29
SNRNP70-206ENST00000598441 RPS8P62241 208 aaKnown RBP29.35■■■□□ 2.29
SNRNP70-206ENST00000598441 C9orf131Q5VYM1 1079 aa29.35■■■□□ 2.29
SNRNP70-206ENST00000598441 TMC4Q7Z404 712 aa29.35■■■□□ 2.29
SNRNP70-206ENST00000598441 RNF181Q9P0P0 153 aa29.35■■■□□ 2.29
SNRNP70-206ENST00000598441 CHMP3Q9Y3E7 222 aa29.35■■■□□ 2.29
SNRNP70-206ENST00000598441 FER1L6Q2WGJ9 1857 aa29.34■■■□□ 2.29
SNRNP70-206ENST00000598441 NBPF7P0C2Y1 421 aaPredicted RBP29.34■■■□□ 2.29
SNRNP70-206ENST00000598441 LMNB1P20700 586 aa29.34■■■□□ 2.29
SNRNP70-206ENST00000598441 ERICH6BQ5W0A0 696 aa29.34■■■□□ 2.29
SNRNP70-206ENST00000598441 SP8Q8IXZ3 490 aa29.34■■■□□ 2.29
SNRNP70-206ENST00000598441 CLUAP1Q96AJ1 413 aa29.34■■■□□ 2.29
SNRNP70-206ENST00000598441 GREM2Q9H772 168 aa29.34■■■□□ 2.29
SNRNP70-206ENST00000598441 GRIPAP1Q4V328 841 aa29.33■■■□□ 2.29
SNRNP70-206ENST00000598441 CDC5LQ99459 802 aaKnown RBP29.33■■■□□ 2.29
SNRNP70-206ENST00000598441 PLIN1O60240 522 aa29.32■■■□□ 2.28
SNRNP70-206ENST00000598441 FKBP4Q02790 459 aaKnown RBP eCLIP29.32■■■□□ 2.283e-10■□□□□ 9.7
SNRNP70-206ENST00000598441 ANKRD18AQ8IVF6 992 aa29.32■■■□□ 2.28
SNRNP70-206ENST00000598441 LTBP3Q9NS15 1303 aa29.31■■■□□ 2.28
SNRNP70-206ENST00000598441 USP44Q9H0E7 712 aa29.3■■■□□ 2.28
SNRNP70-206ENST00000598441 TNNQ9UQP3 1299 aa29.3■■■□□ 2.28
SNRNP70-206ENST00000598441 SBF1O95248 1867 aa29.3■■■□□ 2.28
SNRNP70-206ENST00000598441 UTYO14607 1347 aa29.3■■■□□ 2.28
SNRNP70-206ENST00000598441 CSF1RP07333 972 aa29.3■■■□□ 2.28
SNRNP70-206ENST00000598441 FOXO4P98177 505 aa29.3■■■□□ 2.28
SNRNP70-206ENST00000598441 FAM161AQ3B820 660 aa29.3■■■□□ 2.28
SNRNP70-206ENST00000598441 LMBR1LQ6UX01 489 aa29.3■■■□□ 2.28
SNRNP70-206ENST00000598441 SLC51AQ86UW1 340 aa29.3■■■□□ 2.28
SNRNP70-206ENST00000598441 FTSJ3Q8IY81 847 aaKnown RBP29.3■■■□□ 2.28
SNRNP70-206ENST00000598441 SUCLG2Q96I99 432 aa29.3■■■□□ 2.28
SNRNP70-206ENST00000598441 RTL9Q8NET4 1388 aa29.29■■■□□ 2.28
SNRNP70-206ENST00000598441 ITGA6P23229 1130 aa29.29■■■□□ 2.28
SNRNP70-206ENST00000598441 CCDC88AQ3V6T2 1871 aa29.29■■■□□ 2.28
SNRNP70-206ENST00000598441 INTS3Q68E01 1043 aaKnown RBP29.28■■■□□ 2.28
SNRNP70-206ENST00000598441 DPP8Q6V1X1 898 aaPredicted RBP29.28■■■□□ 2.28
SNRNP70-206ENST00000598441 ZNF277Q9NRM2 450 aaPredicted RBP29.28■■■□□ 2.28
SNRNP70-206ENST00000598441 EPHA10Q5JZY3 1008 aa29.27■■■□□ 2.28
SNRNP70-206ENST00000598441 MPNDQ8N594 471 aa29.27■■■□□ 2.28
SNRNP70-206ENST00000598441 PSMD1Q99460 953 aa29.27■■■□□ 2.28
SNRNP70-206ENST00000598441 ANKRD18BA2A2Z9 1011 aa29.26■■■□□ 2.28
SNRNP70-206ENST00000598441 UBTFL1P0CB47 393 aaPredicted RBP29.26■■■□□ 2.28
SNRNP70-206ENST00000598441 IGHMBP2P38935 993 aaKnown RBP29.26■■■□□ 2.28
SNRNP70-206ENST00000598441 PRELPP51888 382 aa29.26■■■□□ 2.28
SNRNP70-206ENST00000598441 IFIT5Q13325 482 aaKnown RBP29.26■■■□□ 2.28
SNRNP70-206ENST00000598441 COL4A1P02462 1669 aa29.25■■■□□ 2.27
SNRNP70-206ENST00000598441 CCDC57Q2TAC2 916 aa29.25■■■□□ 2.27
SNRNP70-206ENST00000598441 DZIP1LQ8IYY4 767 aaKnown RBP29.25■■■□□ 2.27
SNRNP70-206ENST00000598441 NSFL1CQ9UNZ2 370 aaKnown RBP29.25■■■□□ 2.27
SNRNP70-206ENST00000598441 TAF7LQ5H9L4 462 aa29.24■■■□□ 2.27
SNRNP70-206ENST00000598441 MPHOSPH8Q99549 860 aa29.24■■■□□ 2.27
SNRNP70-206ENST00000598441 BICC1Q9H694 974 aaKnown RBP29.24■■■□□ 2.27
SNRNP70-206ENST00000598441 HDAC5Q9UQL6 1122 aa29.24■■■□□ 2.27
SNRNP70-206ENST00000598441 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.23■■■□□ 2.27
SNRNP70-206ENST00000598441 SUPT20HQ8NEM7 779 aa29.23■■■□□ 2.27
SNRNP70-206ENST00000598441 KAZALD1Q96I82 304 aa29.23■■■□□ 2.27
SNRNP70-206ENST00000598441 SNED1Q8TER0 1413 aa29.23■■■□□ 2.27
SNRNP70-206ENST00000598441 IARSP41252 1262 aaKnown RBP29.22■■■□□ 2.27
SNRNP70-206ENST00000598441 TMEM57Q8N5G2 664 aa29.22■■■□□ 2.27
SNRNP70-206ENST00000598441 ANKIB1Q9P2G1 1089 aa29.22■■■□□ 2.27
SNRNP70-206ENST00000598441 BSDC1Q9NW68 430 aaPredicted RBP29.22■■■□□ 2.27
SNRNP70-206ENST00000598441 MEIS3Q99687 375 aa29.21■■■□□ 2.27
SNRNP70-206ENST00000598441 SPEF2Q9C093 1822 aa29.21■■■□□ 2.27
SNRNP70-206ENST00000598441 GNAI3P08754 354 aa29.2■■■□□ 2.26
SNRNP70-206ENST00000598441 GPSM2P81274 684 aa29.2■■■□□ 2.26
SNRNP70-206ENST00000598441 ZNF526Q8TF50 670 aaPredicted RBP29.2■■■□□ 2.26
SNRNP70-206ENST00000598441 LRRC37AA6NMS7 1700 aa29.2■■■□□ 2.26
SNRNP70-206ENST00000598441 C6orf229H3BNL8 230 aa29.19■■■□□ 2.26
SNRNP70-206ENST00000598441 MS4A1P11836 297 aa29.19■■■□□ 2.26
SNRNP70-206ENST00000598441 ITPRIPQ8IWB1 547 aa29.19■■■□□ 2.26
SNRNP70-206ENST00000598441 LARGE2Q8N3Y3 721 aa29.19■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms